RNA–Protein interactions for RNA: ENST00000533761.5

CCDC90B-218, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 1,587 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-218ENST00000533761 ASIC4Q96FT7 647 aa11.12□□□□□ -0.63
CCDC90B-218ENST00000533761 HMCESQ96FZ2 354 aa11.12□□□□□ -0.63
CCDC90B-218ENST00000533761 TEKT5Q96M29 485 aa11.12□□□□□ -0.63
CCDC90B-218ENST00000533761 PRICKLE1Q96MT3 831 aaPredicted RBP11.12□□□□□ -0.63
CCDC90B-218ENST00000533761 RBM15Q96T37 977 aaKnown RBP eCLIP11.12□□□□□ -0.63
CCDC90B-218ENST00000533761 C2orf49Q9BVC5 232 aaPredicted RBP11.12□□□□□ -0.63
CCDC90B-218ENST00000533761 BBS2Q9BXC9 721 aa11.12□□□□□ -0.63
CCDC90B-218ENST00000533761 PABPC3Q9H361 631 aaKnown RBP11.12□□□□□ -0.63
CCDC90B-218ENST00000533761 C10orf88Q9H8K7 445 aa11.12□□□□□ -0.63
CCDC90B-218ENST00000533761 ECT2Q9H8V3 914 aa11.12□□□□□ -0.63
CCDC90B-218ENST00000533761 ATP13A1Q9HD20 1204 aa11.12□□□□□ -0.63
CCDC90B-218ENST00000533761 SLC2A4RGQ9NR83 387 aa11.12□□□□□ -0.63
CCDC90B-218ENST00000533761 GTSE1Q9NYZ3 720 aa11.12□□□□□ -0.63
CCDC90B-218ENST00000533761 DUSP12Q9UNI6 340 aa11.12□□□□□ -0.63
CCDC90B-218ENST00000533761 DOCK4Q8N1I0 1966 aa11.12□□□□□ -0.63
CCDC90B-218ENST00000533761 JCHAINP01591 159 aa11.11□□□□□ -0.63
CCDC90B-218ENST00000533761 MLNP12872 115 aa11.11□□□□□ -0.63
CCDC90B-218ENST00000533761 ARSAP15289 507 aa11.11□□□□□ -0.63
CCDC90B-218ENST00000533761 CES1P23141 567 aa11.11□□□□□ -0.63
CCDC90B-218ENST00000533761 PHBP35232 272 aa11.11□□□□□ -0.63
CCDC90B-218ENST00000533761 MMP13P45452 471 aa11.11□□□□□ -0.63
CCDC90B-218ENST00000533761 GAD2Q05329 585 aa11.11□□□□□ -0.63
CCDC90B-218ENST00000533761 ZNF235Q14590 738 aa11.11□□□□□ -0.63
CCDC90B-218ENST00000533761 NAPEPLDQ6IQ20 393 aa11.11□□□□□ -0.63
CCDC90B-218ENST00000533761 RETSATQ6NUM9 610 aa11.11□□□□□ -0.63
CCDC90B-218ENST00000533761 TMEM25Q86YD3 366 aa11.11□□□□□ -0.63
CCDC90B-218ENST00000533761 CARNMT1Q8N4J0 409 aa11.11□□□□□ -0.63
CCDC90B-218ENST00000533761 CCDC33Q8N5R6 958 aa11.11□□□□□ -0.63
CCDC90B-218ENST00000533761 MAML1Q92585 1016 aa11.11□□□□□ -0.63
CCDC90B-218ENST00000533761 ARHGEF2Q92974 986 aaKnown RBP11.11□□□□□ -0.63
CCDC90B-218ENST00000533761 ACDQ96AP0 544 aa11.11□□□□□ -0.63
CCDC90B-218ENST00000533761 GDAP1L1Q96MZ0 367 aa11.11□□□□□ -0.63
CCDC90B-218ENST00000533761 AGAP3Q96P47 875 aa11.11□□□□□ -0.63
CCDC90B-218ENST00000533761 UHRF1Q96T88 793 aaPredicted RBP11.11□□□□□ -0.63
CCDC90B-218ENST00000533761 IL12RB2Q99665 862 aa11.11□□□□□ -0.63
CCDC90B-218ENST00000533761 CCDC77Q9BR77 488 aa11.11□□□□□ -0.63
CCDC90B-218ENST00000533761 LRRC40Q9H9A6 602 aa11.11□□□□□ -0.63
CCDC90B-218ENST00000533761 ETNK1Q9HBU6 452 aa11.11□□□□□ -0.63
CCDC90B-218ENST00000533761 HPS4Q9NQG7 708 aa11.11□□□□□ -0.63
CCDC90B-218ENST00000533761 VPS45Q9NRW7 570 aa11.11□□□□□ -0.63
CCDC90B-218ENST00000533761 RBM22Q9NW64 420 aaKnown RBP eCLIP11.11□□□□□ -0.63
CCDC90B-218ENST00000533761 MARK1Q9P0L2 795 aa11.11□□□□□ -0.63
CCDC90B-218ENST00000533761 KIAA1522Q9P206 1035 aaPredicted RBP11.11□□□□□ -0.63
CCDC90B-218ENST00000533761 ZNF212Q9UDV6 495 aa11.11□□□□□ -0.63
CCDC90B-218ENST00000533761 TTLL3Q9Y4R7 772 aa11.11□□□□□ -0.63
CCDC90B-218ENST00000533761 KDELR3O43731 214 aa11.11□□□□□ -0.63
CCDC90B-218ENST00000533761 OPA1O60313 960 aa11.11□□□□□ -0.63
CCDC90B-218ENST00000533761 TSPAN3O60637 253 aa11.11□□□□□ -0.63
CCDC90B-218ENST00000533761 PRAMEF11O60813 436 aa11.11□□□□□ -0.63
CCDC90B-218ENST00000533761 SPAG6O75602 509 aa11.11□□□□□ -0.63
CCDC90B-218ENST00000533761 CYP17A1P05093 508 aa11.11□□□□□ -0.63
CCDC90B-218ENST00000533761 IVLP07476 585 aa11.11□□□□□ -0.63
CCDC90B-218ENST00000533761 FAM153BP0C7A2 387 aa11.11□□□□□ -0.63
CCDC90B-218ENST00000533761 ADH5P11766 374 aa11.11□□□□□ -0.63
CCDC90B-218ENST00000533761 TYRP14679 529 aa11.11□□□□□ -0.63
CCDC90B-218ENST00000533761 GLULP15104 373 aa11.11□□□□□ -0.63
CCDC90B-218ENST00000533761 GEMP55040 296 aa11.11□□□□□ -0.63
CCDC90B-218ENST00000533761 IFFO1Q0D2I5 559 aa11.11□□□□□ -0.63
CCDC90B-218ENST00000533761 KCNJ11Q14654 390 aa11.11□□□□□ -0.63
CCDC90B-218ENST00000533761 FAM153CQ494X1 144 aa11.11□□□□□ -0.63
CCDC90B-218ENST00000533761 B4GALNT4Q76KP1 1039 aa11.11□□□□□ -0.63
CCDC90B-218ENST00000533761 CIR1Q86X95 450 aaPredicted RBP11.11□□□□□ -0.63
CCDC90B-218ENST00000533761 CCNJLQ8IV13 435 aa11.11□□□□□ -0.63
CCDC90B-218ENST00000533761 DCAF4L2Q8NA75 395 aa11.11□□□□□ -0.63
CCDC90B-218ENST00000533761 NECAB3Q96P71 396 aaPredicted RBP11.11□□□□□ -0.63
CCDC90B-218ENST00000533761 NAT9Q9BTE0 207 aa11.11□□□□□ -0.63
CCDC90B-218ENST00000533761 SPON2Q9BUD6 331 aa11.11□□□□□ -0.63
CCDC90B-218ENST00000533761 FUT8Q9BYC5 575 aa11.11□□□□□ -0.63
CCDC90B-218ENST00000533761 POLR1EQ9GZS1 481 aaKnown RBP11.11□□□□□ -0.63
CCDC90B-218ENST00000533761 NEUROG2Q9H2A3 272 aa11.11□□□□□ -0.63
CCDC90B-218ENST00000533761 NDFIP2Q9NV92 336 aa11.11□□□□□ -0.63
CCDC90B-218ENST00000533761 UBA2Q9UBT2 640 aaPredicted RBP11.11□□□□□ -0.63
CCDC90B-218ENST00000533761 SEPT3Q9UH03 358 aa11.11□□□□□ -0.63
CCDC90B-218ENST00000533761 FAM153AQ9UHL3 310 aa11.11□□□□□ -0.63
CCDC90B-218ENST00000533761 VPS28Q9UK41 221 aa11.11□□□□□ -0.63
CCDC90B-218ENST00000533761 OTOL1A6NHN0 477 aaPredicted RBP11.1□□□□□ -0.63
CCDC90B-218ENST00000533761 KRTAP9-1A8MXZ3 250 aaPredicted RBP11.1□□□□□ -0.63
CCDC90B-218ENST00000533761 NEDD8-MDP1E9PL57 170 aa11.1□□□□□ -0.63
CCDC90B-218ENST00000533761 GFRA2O00451 464 aa11.1□□□□□ -0.63
CCDC90B-218ENST00000533761 TRDMT1O14717 391 aaKnown RBP11.1□□□□□ -0.63
CCDC90B-218ENST00000533761 MAP2K7O14733 419 aa11.1□□□□□ -0.63
CCDC90B-218ENST00000533761 HOXC11O43248 304 aaPredicted RBP11.1□□□□□ -0.63
CCDC90B-218ENST00000533761 NARSO43776 548 aaKnown RBP11.1□□□□□ -0.63
CCDC90B-218ENST00000533761 ADAM23O75077 832 aa11.1□□□□□ -0.63
CCDC90B-218ENST00000533761 PENKP01210 267 aaPredicted RBP11.1□□□□□ -0.63
CCDC90B-218ENST00000533761 TSHRP16473 764 aa11.1□□□□□ -0.63
CCDC90B-218ENST00000533761 CA4P22748 312 aa11.1□□□□□ -0.63
CCDC90B-218ENST00000533761 PSMB4P28070 264 aa11.1□□□□□ -0.63
CCDC90B-218ENST00000533761 GJA4P35212 333 aa11.1□□□□□ -0.63
CCDC90B-218ENST00000533761 LBRQ14739 615 aaKnown RBP11.1□□□□□ -0.63
CCDC90B-218ENST00000533761 PREPLQ4J6C6 727 aaPredicted RBP11.1□□□□□ -0.63
CCDC90B-218ENST00000533761 FYB2Q5VWT5 728 aa11.1□□□□□ -0.63
CCDC90B-218ENST00000533761 ARMC3Q5W041 872 aa11.1□□□□□ -0.63
CCDC90B-218ENST00000533761 LRIG3Q6UXM1 1119 aa11.1□□□□□ -0.63
CCDC90B-218ENST00000533761 PRUNE1Q86TP1 453 aa11.1□□□□□ -0.63
CCDC90B-218ENST00000533761 RALGPS2Q86X27 583 aaPredicted RBP11.1□□□□□ -0.63
CCDC90B-218ENST00000533761 ATP11CQ8NB49 1132 aa11.1□□□□□ -0.63
CCDC90B-218ENST00000533761 PYROXD1Q8WU10 500 aa11.1□□□□□ -0.63
CCDC90B-218ENST00000533761 BHMTQ93088 406 aa11.1□□□□□ -0.63
CCDC90B-218ENST00000533761 XPO6Q96QU8 1125 aaKnown RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms