RNA–Protein interactions for RNA: ENST00000533733.5

ATM-222, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATM, Length 1,731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-222ENST00000533733 GLDCP23378 1020 aa12.11□□□□□ -0.47
ATM-222ENST00000533733 TM4SF4P48230 202 aa12.11□□□□□ -0.47
ATM-222ENST00000533733 RABGGTBP53611 331 aa12.11□□□□□ -0.47
ATM-222ENST00000533733 SLC12A2P55011 1212 aa12.11□□□□□ -0.47
ATM-222ENST00000533733 DSC1Q08554 894 aa12.11□□□□□ -0.47
ATM-222ENST00000533733 LBRQ14739 615 aaKnown RBP12.11□□□□□ -0.47
ATM-222ENST00000533733 CCSAPQ6IQ19 270 aaPredicted RBP12.11□□□□□ -0.47
ATM-222ENST00000533733 PGM2L1Q6PCE3 622 aa12.11□□□□□ -0.47
ATM-222ENST00000533733 C16orf89Q6UX73 402 aa12.11□□□□□ -0.47
ATM-222ENST00000533733 SLC24A5Q71RS6 500 aa12.11□□□□□ -0.47
ATM-222ENST00000533733 SCD5Q86SK9 330 aa12.11□□□□□ -0.47
ATM-222ENST00000533733 SAPCD2Q86UD0 394 aa12.11□□□□□ -0.47
ATM-222ENST00000533733 CPSF7Q8N684 471 aaKnown RBP12.11□□□□□ -0.47
ATM-222ENST00000533733 ZNF781Q8N8C0 355 aa12.11□□□□□ -0.47
ATM-222ENST00000533733 GPATCH11Q8N954 259 aa12.11□□□□□ -0.47
ATM-222ENST00000533733 RP9Q8TA86 221 aaKnown RBP12.11□□□□□ -0.47
ATM-222ENST00000533733 SCAMP5Q8TAC9 235 aa12.11□□□□□ -0.47
ATM-222ENST00000533733 SCG3Q8WXD2 468 aaKnown RBP12.11□□□□□ -0.47
ATM-222ENST00000533733 PANX3Q96QZ0 392 aa12.11□□□□□ -0.47
ATM-222ENST00000533733 APOL2Q9BQE5 337 aa12.11□□□□□ -0.47
ATM-222ENST00000533733 FTHL17Q9BXU8 183 aa12.11□□□□□ -0.47
ATM-222ENST00000533733 ZYG11BQ9C0D3 744 aa12.11□□□□□ -0.47
ATM-222ENST00000533733 VCXQ9H320 206 aa12.11□□□□□ -0.47
ATM-222ENST00000533733 ZNF358Q9NW07 568 aa12.11□□□□□ -0.47
ATM-222ENST00000533733 IL37Q9NZH6 218 aa12.11□□□□□ -0.47
ATM-222ENST00000533733 NCKIPSDQ9NZQ3 722 aa12.11□□□□□ -0.47
ATM-222ENST00000533733 MAGED2Q9UNF1 606 aaPredicted RBP12.11□□□□□ -0.47
ATM-222ENST00000533733 INPP5FQ9Y2H2 1132 aa12.11□□□□□ -0.47
ATM-222ENST00000533733 HS3ST4Q9Y661 456 aa12.11□□□□□ -0.47
ATM-222ENST00000533733 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.11□□□□□ -0.47
ATM-222ENST00000533733 IGLV3-10A0A075B6K4 115 aa12.11□□□□□ -0.47
ATM-222ENST00000533733 A0A088AWK7 358 aa12.11□□□□□ -0.47
ATM-222ENST00000533733 FAM92AA1XBS5 289 aa12.11□□□□□ -0.47
ATM-222ENST00000533733 TARM1B6A8C7 271 aa12.11□□□□□ -0.47
ATM-222ENST00000533733 PENKP01210 267 aaPredicted RBP12.11□□□□□ -0.47
ATM-222ENST00000533733 HLA-DQB2P05538 268 aa12.11□□□□□ -0.47
ATM-222ENST00000533733 COX4I1P13073 169 aa12.11□□□□□ -0.47
ATM-222ENST00000533733 ANPEPP15144 967 aa12.11□□□□□ -0.47
ATM-222ENST00000533733 TPH1P17752 444 aa12.11□□□□□ -0.47
ATM-222ENST00000533733 NCF2P19878 526 aaPredicted RBP12.11□□□□□ -0.47
ATM-222ENST00000533733 GRIA4P48058 902 aa12.11□□□□□ -0.47
ATM-222ENST00000533733 KPNA1P52294 538 aaPredicted RBP12.11□□□□□ -0.47
ATM-222ENST00000533733 IRF9Q00978 393 aa12.11□□□□□ -0.47
ATM-222ENST00000533733 GALNT1Q10472 559 aaPredicted RBP12.11□□□□□ -0.47
ATM-222ENST00000533733 KCNA10Q16322 511 aa12.11□□□□□ -0.47
ATM-222ENST00000533733 FAM83EQ2M2I3 478 aa12.11□□□□□ -0.47
ATM-222ENST00000533733 TRIM71Q2Q1W2 868 aaKnown RBP12.11□□□□□ -0.47
ATM-222ENST00000533733 KLC3Q6P597 504 aa12.11□□□□□ -0.47
ATM-222ENST00000533733 CTU1Q7Z7A3 348 aaKnown RBP12.11□□□□□ -0.47
ATM-222ENST00000533733 TNS4Q8IZW8 715 aa12.11□□□□□ -0.47
ATM-222ENST00000533733 USP33Q8TEY7 942 aa12.11□□□□□ -0.47
ATM-222ENST00000533733 IMP4Q96G21 291 aaKnown RBP12.11□□□□□ -0.47
ATM-222ENST00000533733 ATXN7L3BQ96GX2 97 aa12.11□□□□□ -0.47
ATM-222ENST00000533733 SCYL1Q96KG9 808 aa12.11□□□□□ -0.47
ATM-222ENST00000533733 MRGPRX2Q96LB1 330 aa12.11□□□□□ -0.47
ATM-222ENST00000533733 ZNF184Q99676 751 aaPredicted RBP12.11□□□□□ -0.47
ATM-222ENST00000533733 CAB39LQ9H9S4 337 aa12.11□□□□□ -0.47
ATM-222ENST00000533733 ATP13A1Q9HD20 1204 aa12.11□□□□□ -0.47
ATM-222ENST00000533733 PRDM5Q9NQX1 630 aaPredicted RBP12.11□□□□□ -0.47
ATM-222ENST00000533733 UBP1Q9NZI7 540 aa12.11□□□□□ -0.47
ATM-222ENST00000533733 VPS28Q9UK41 221 aa12.11□□□□□ -0.47
ATM-222ENST00000533733 RUVBL2Q9Y230 463 aaKnown RBP12.11□□□□□ -0.47
ATM-222ENST00000533733 PCDHB5Q9Y5E4 795 aa12.11□□□□□ -0.47
ATM-222ENST00000533733 GREB1Q4ZG55 1949 aa12.11□□□□□ -0.47
ATM-222ENST00000533733 RGSL1A5PLK6 1076 aa12.1□□□□□ -0.47
ATM-222ENST00000533733 OR6C75A6NL08 312 aa12.1□□□□□ -0.47
ATM-222ENST00000533733 VAPBO95292 243 aa12.1□□□□□ -0.47
ATM-222ENST00000533733 RBP1P09455 135 aa12.1□□□□□ -0.47
ATM-222ENST00000533733 ATP5F1P24539 256 aaPredicted RBP12.1□□□□□ -0.47
ATM-222ENST00000533733 ARRB2P32121 409 aa12.1□□□□□ -0.47
ATM-222ENST00000533733 LEPRP48357 1165 aaKnown RBP12.1□□□□□ -0.47
ATM-222ENST00000533733 SERPINH1P50454 418 aaKnown RBP12.1□□□□□ -0.47
ATM-222ENST00000533733 PAPOLAP51003 745 aaKnown RBP12.1□□□□□ -0.47
ATM-222ENST00000533733 TBX4P57082 545 aa12.1□□□□□ -0.47
ATM-222ENST00000533733 YBEYP58557 167 aaPredicted RBP12.1□□□□□ -0.47
ATM-222ENST00000533733 RPL26P61254 145 aaKnown RBP12.1□□□□□ -0.47
ATM-222ENST00000533733 KLF10Q13118 480 aa12.1□□□□□ -0.47
ATM-222ENST00000533733 POU6F1Q14863 301 aa12.1□□□□□ -0.47
ATM-222ENST00000533733 SLC14A2Q15849 920 aa12.1□□□□□ -0.47
ATM-222ENST00000533733 PAN2Q504Q3 1202 aaKnown RBP12.1□□□□□ -0.47
ATM-222ENST00000533733 SLC39A12Q504Y0 691 aa12.1□□□□□ -0.47
ATM-222ENST00000533733 AGAP9Q5VTM2 703 aa12.1□□□□□ -0.47
ATM-222ENST00000533733 KDELC1Q6UW63 502 aa12.1□□□□□ -0.47
ATM-222ENST00000533733 TMC7Q7Z402 723 aa12.1□□□□□ -0.47
ATM-222ENST00000533733 RNF180Q86T96 592 aa12.1□□□□□ -0.47
ATM-222ENST00000533733 FSTL5Q8N475 847 aaPredicted RBP12.1□□□□□ -0.47
ATM-222ENST00000533733 TMEM151AQ8N4L1 468 aa12.1□□□□□ -0.47
ATM-222ENST00000533733 TEX26Q8N6G2 289 aa12.1□□□□□ -0.47
ATM-222ENST00000533733 SPATA22Q8NHS9 363 aa12.1□□□□□ -0.47
ATM-222ENST00000533733 AZIN2Q96A70 460 aa12.1□□□□□ -0.47
ATM-222ENST00000533733 BTN2A3PQ96KV6 586 aa12.1□□□□□ -0.47
ATM-222ENST00000533733 CEP295NLQ96MC4 621 aa12.1□□□□□ -0.47
ATM-222ENST00000533733 NR1H4Q96RI1 486 aaPredicted RBP12.1□□□□□ -0.47
ATM-222ENST00000533733 EML4Q9HC35 981 aaKnown RBP12.1□□□□□ -0.47
ATM-222ENST00000533733 RIMKLBQ9ULI2 386 aa12.1□□□□□ -0.47
ATM-222ENST00000533733 CDYLQ9Y232 598 aa12.1□□□□□ -0.47
ATM-222ENST00000533733 THSD7BQ9C0I4 1608 aa12.1□□□□□ -0.47
ATM-222ENST00000533733 A0A1W2PQH9 124 aa12.09□□□□□ -0.47
ATM-222ENST00000533733 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.09□□□□□ -0.47
ATM-222ENST00000533733 SLC7A4O43246 635 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms