RNA–Protein interactions for RNA: ENST00000533643.1

COMMD9-208, Transcript of COMM domain containing 9, humanhuman

TSL 2

Gene COMMD9, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-208ENST00000533643 IGSF6O95976 241 aa12.08□□□□□ -0.48
COMMD9-208ENST00000533643 EPHX1P07099 455 aa12.08□□□□□ -0.48
COMMD9-208ENST00000533643 DCNP07585 359 aaKnown RBP12.08□□□□□ -0.48
COMMD9-208ENST00000533643 CTAGE8P0CG41 777 aa12.08□□□□□ -0.48
COMMD9-208ENST00000533643 NFKB1P19838 968 aa12.08□□□□□ -0.48
COMMD9-208ENST00000533643 CR2P20023 1033 aa12.08□□□□□ -0.48
COMMD9-208ENST00000533643 RPL22P35268 128 aaKnown RBP12.08□□□□□ -0.48
COMMD9-208ENST00000533643 RPS9P46781 194 aaKnown RBP12.08□□□□□ -0.48
COMMD9-208ENST00000533643 SNRPD1P62314 119 aaKnown RBP12.08□□□□□ -0.48
COMMD9-208ENST00000533643 DSC2Q02487 901 aa12.08□□□□□ -0.48
COMMD9-208ENST00000533643 CAMK2GQ13555 558 aaPredicted RBP12.08□□□□□ -0.48
COMMD9-208ENST00000533643 IHHQ14623 411 aa12.08□□□□□ -0.48
COMMD9-208ENST00000533643 TRIP13Q15645 432 aaPredicted RBP12.08□□□□□ -0.48
COMMD9-208ENST00000533643 MYLK3Q32MK0 819 aa12.08□□□□□ -0.48
COMMD9-208ENST00000533643 CWF19L1Q69YN2 538 aaKnown RBP12.08□□□□□ -0.48
COMMD9-208ENST00000533643 ARHGEF18Q6ZSZ5 1173 aa12.08□□□□□ -0.48
COMMD9-208ENST00000533643 CTAGE6Q86UF2 777 aa12.08□□□□□ -0.48
COMMD9-208ENST00000533643 CTAGE4Q8IX94 777 aa12.08□□□□□ -0.48
COMMD9-208ENST00000533643 STK40Q8N2I9 435 aa12.08□□□□□ -0.48
COMMD9-208ENST00000533643 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.08□□□□□ -0.48
COMMD9-208ENST00000533643 CEP112Q8N8E3 955 aa12.08□□□□□ -0.48
COMMD9-208ENST00000533643 CCDC89Q8N998 374 aa12.08□□□□□ -0.48
COMMD9-208ENST00000533643 CHST14Q8NCH0 376 aa12.08□□□□□ -0.48
COMMD9-208ENST00000533643 OR2AP1Q8NGE2 309 aa12.08□□□□□ -0.48
COMMD9-208ENST00000533643 GRK7Q8WTQ7 553 aa12.08□□□□□ -0.48
COMMD9-208ENST00000533643 SLCO2A1Q92959 643 aa12.08□□□□□ -0.48
COMMD9-208ENST00000533643 VOPP1Q96AW1 172 aa12.08□□□□□ -0.48
COMMD9-208ENST00000533643 ERLEC1Q96DZ1 483 aa12.08□□□□□ -0.48
COMMD9-208ENST00000533643 GDAP1L1Q96MZ0 367 aa12.08□□□□□ -0.48
COMMD9-208ENST00000533643 RUNDC3BQ96NL0 473 aa12.08□□□□□ -0.48
COMMD9-208ENST00000533643 NUDCD1Q96RS6 583 aa12.08□□□□□ -0.48
COMMD9-208ENST00000533643 FAM129BQ96TA1 746 aa12.08□□□□□ -0.48
COMMD9-208ENST00000533643 SEMA3CQ99985 751 aa12.08□□□□□ -0.48
COMMD9-208ENST00000533643 POLR1EQ9GZS1 481 aaKnown RBP12.08□□□□□ -0.48
COMMD9-208ENST00000533643 SLC25A51Q9H1U9 297 aa12.08□□□□□ -0.48
COMMD9-208ENST00000533643 NOD2Q9HC29 1040 aa12.08□□□□□ -0.48
COMMD9-208ENST00000533643 CD248Q9HCU0 757 aa12.08□□□□□ -0.48
COMMD9-208ENST00000533643 PRSS16Q9NQE7 514 aa12.08□□□□□ -0.48
COMMD9-208ENST00000533643 RRAGDQ9NQL2 400 aaPredicted RBP12.08□□□□□ -0.48
COMMD9-208ENST00000533643 EVLQ9UI08 416 aaPredicted RBP12.08□□□□□ -0.48
COMMD9-208ENST00000533643 TTLL3Q9Y4R7 772 aa12.08□□□□□ -0.48
COMMD9-208ENST00000533643 SHROOM3Q8TF72 1996 aa12.08□□□□□ -0.48
COMMD9-208ENST00000533643 F5H423 210 aaPredicted RBP12.07□□□□□ -0.48
COMMD9-208ENST00000533643 TTI1O43156 1089 aa12.07□□□□□ -0.48
COMMD9-208ENST00000533643 PI15O43692 258 aa12.07□□□□□ -0.48
COMMD9-208ENST00000533643 SYNCRIPO60506 623 aaKnown RBP12.07□□□□□ -0.48
COMMD9-208ENST00000533643 METTL18O95568 372 aa12.07□□□□□ -0.48
COMMD9-208ENST00000533643 POP4O95707 220 aaKnown RBP12.07□□□□□ -0.48
COMMD9-208ENST00000533643 GAS8O95995 478 aa12.07□□□□□ -0.48
COMMD9-208ENST00000533643 KRT14P02533 472 aa12.07□□□□□ -0.48
COMMD9-208ENST00000533643 MMP2P08253 660 aa12.07□□□□□ -0.48
COMMD9-208ENST00000533643 COL9A1P20849 921 aa12.07□□□□□ -0.48
COMMD9-208ENST00000533643 CES1P23141 567 aa12.07□□□□□ -0.48
COMMD9-208ENST00000533643 GKP32189 559 aa12.07□□□□□ -0.48
COMMD9-208ENST00000533643 RECQLP46063 649 aaPredicted RBP12.07□□□□□ -0.48
COMMD9-208ENST00000533643 SCNN1BP51168 640 aa12.07□□□□□ -0.48
COMMD9-208ENST00000533643 CCNHP51946 323 aaPredicted RBP12.07□□□□□ -0.48
COMMD9-208ENST00000533643 MRPS25P82663 173 aaKnown RBP12.07□□□□□ -0.48
COMMD9-208ENST00000533643 DR1Q01658 176 aa12.07□□□□□ -0.48
COMMD9-208ENST00000533643 DHX34Q14147 1143 aaKnown RBP12.07□□□□□ -0.48
COMMD9-208ENST00000533643 STARD3Q14849 445 aa12.07□□□□□ -0.48
COMMD9-208ENST00000533643 P3H1Q32P28 736 aa12.07□□□□□ -0.48
COMMD9-208ENST00000533643 EOGTQ5NDL2 527 aa12.07□□□□□ -0.48
COMMD9-208ENST00000533643 ITPRIPL1Q6GPH6 555 aa12.07□□□□□ -0.48
COMMD9-208ENST00000533643 KIAA1211LQ6NV74 962 aa12.07□□□□□ -0.48
COMMD9-208ENST00000533643 NCEH1Q6PIU2 408 aa12.07□□□□□ -0.48
COMMD9-208ENST00000533643 TMEM92Q6UXU6 159 aa12.07□□□□□ -0.48
COMMD9-208ENST00000533643 PRPF39Q86UA1 669 aaKnown RBP12.07□□□□□ -0.48
COMMD9-208ENST00000533643 RYBPQ8N488 228 aaPredicted RBP12.07□□□□□ -0.48
COMMD9-208ENST00000533643 MMGT1Q8N4V1 131 aa12.07□□□□□ -0.48
COMMD9-208ENST00000533643 NOA1Q8NC60 698 aaKnown RBP12.07□□□□□ -0.48
COMMD9-208ENST00000533643 OR6K2Q8NGY2 324 aa12.07□□□□□ -0.48
COMMD9-208ENST00000533643 SPATA22Q8NHS9 363 aa12.07□□□□□ -0.48
COMMD9-208ENST00000533643 TADA1Q96BN2 335 aa12.07□□□□□ -0.48
COMMD9-208ENST00000533643 IMP4Q96G21 291 aaKnown RBP12.07□□□□□ -0.48
COMMD9-208ENST00000533643 GORASP1Q9BQQ3 440 aa12.07□□□□□ -0.48
COMMD9-208ENST00000533643 HEPHQ9BQS7 1158 aa12.07□□□□□ -0.48
COMMD9-208ENST00000533643 GBA3Q9H227 469 aa12.07□□□□□ -0.48
COMMD9-208ENST00000533643 CHRDQ9H2X0 955 aa12.07□□□□□ -0.48
COMMD9-208ENST00000533643 PCDH9Q9HC56 1237 aa12.07□□□□□ -0.48
COMMD9-208ENST00000533643 SCUBE2Q9NQ36 999 aa12.07□□□□□ -0.48
COMMD9-208ENST00000533643 HAUS2Q9NVX0 235 aa12.07□□□□□ -0.48
COMMD9-208ENST00000533643 C2orf42Q9NWW7 574 aa12.07□□□□□ -0.48
COMMD9-208ENST00000533643 PAK5Q9P286 719 aa12.07□□□□□ -0.48
COMMD9-208ENST00000533643 RSPH14Q9UHP6 348 aa12.07□□□□□ -0.48
COMMD9-208ENST00000533643 TECTAO75443 2155 aa12.06□□□□□ -0.48
COMMD9-208ENST00000533643 RAD51CO43502 376 aa12.06□□□□□ -0.48
COMMD9-208ENST00000533643 ATG13O75143 517 aa12.06□□□□□ -0.48
COMMD9-208ENST00000533643 CTSLP07711 333 aa12.06□□□□□ -0.48
COMMD9-208ENST00000533643 HOXB2P14652 356 aa12.06□□□□□ -0.48
COMMD9-208ENST00000533643 PSMB4P28070 264 aa12.06□□□□□ -0.48
COMMD9-208ENST00000533643 ACTN2P35609 894 aa12.06□□□□□ -0.48
COMMD9-208ENST00000533643 CD86P42081 329 aa12.06□□□□□ -0.48
COMMD9-208ENST00000533643 CLCN5P51795 746 aa12.06□□□□□ -0.48
COMMD9-208ENST00000533643 AP1S1P61966 158 aa12.06□□□□□ -0.48
COMMD9-208ENST00000533643 SKOR1P84550 965 aa12.06□□□□□ -0.48
COMMD9-208ENST00000533643 PTK6Q13882 451 aa12.06□□□□□ -0.48
COMMD9-208ENST00000533643 PPP1R7Q15435 360 aa12.06□□□□□ -0.48
COMMD9-208ENST00000533643 PARP6Q2NL67 630 aa12.06□□□□□ -0.48
COMMD9-208ENST00000533643 RALGPS1Q5JS13 557 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms