RNA–Protein interactions for RNA: ENST00000533628.5

RPUSD4-208, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene RPUSD4, Length 2,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-208ENST00000533628 NSMCE3Q96MG7 304 aa12.92□□□□□ -0.34
RPUSD4-208ENST00000533628 IL12RB2Q99665 862 aa12.92□□□□□ -0.34
RPUSD4-208ENST00000533628 TM6SF2Q9BZW4 377 aa12.92□□□□□ -0.34
RPUSD4-208ENST00000533628 SARDHQ9UL12 918 aa12.92□□□□□ -0.34
RPUSD4-208ENST00000533628 WASF2Q9Y6W5 498 aa12.92□□□□□ -0.34
RPUSD4-208ENST00000533628 SHROOM3Q8TF72 1996 aa12.92□□□□□ -0.34
RPUSD4-208ENST00000533628 PPP1R12AO14974 1030 aaPredicted RBP12.91□□□□□ -0.34
RPUSD4-208ENST00000533628 TUBB4AP04350 444 aa12.91□□□□□ -0.34
RPUSD4-208ENST00000533628 CR2P20023 1033 aa12.91□□□□□ -0.34
RPUSD4-208ENST00000533628 CSNK1DP48730 415 aa12.91□□□□□ -0.34
RPUSD4-208ENST00000533628 CCNHP51946 323 aaPredicted RBP12.91□□□□□ -0.34
RPUSD4-208ENST00000533628 RHOAP61586 193 aa12.91□□□□□ -0.34
RPUSD4-208ENST00000533628 IFI35P80217 286 aaPredicted RBP12.91□□□□□ -0.34
RPUSD4-208ENST00000533628 ATXN7L2Q5T6C5 722 aaPredicted RBP12.91□□□□□ -0.34
RPUSD4-208ENST00000533628 PAPD7Q5XG87 772 aaKnown RBP12.91□□□□□ -0.34
RPUSD4-208ENST00000533628 CCNYQ8ND76 341 aa12.91□□□□□ -0.34
RPUSD4-208ENST00000533628 HMGB4Q8WW32 186 aa12.91□□□□□ -0.34
RPUSD4-208ENST00000533628 PBKQ96KB5 322 aa12.91□□□□□ -0.34
RPUSD4-208ENST00000533628 QKIQ96PU8 341 aaKnown RBP eCLIP12.91□□□□□ -0.34
RPUSD4-208ENST00000533628 SEPT3Q9UH03 358 aa12.91□□□□□ -0.34
RPUSD4-208ENST00000533628 SNX12Q9UMY4 172 aa12.91□□□□□ -0.34
RPUSD4-208ENST00000533628 HACD1B0YJ81 288 aa12.9□□□□□ -0.34
RPUSD4-208ENST00000533628 INSIG1O15503 277 aa12.9□□□□□ -0.34
RPUSD4-208ENST00000533628 ALDH1A2O94788 518 aa12.9□□□□□ -0.34
RPUSD4-208ENST00000533628 CCNB1P14635 433 aa12.9□□□□□ -0.34
RPUSD4-208ENST00000533628 CHRNA3P32297 505 aa12.9□□□□□ -0.34
RPUSD4-208ENST00000533628 FNTBP49356 437 aa12.9□□□□□ -0.34
RPUSD4-208ENST00000533628 SNRPD1P62314 119 aaKnown RBP12.9□□□□□ -0.34
RPUSD4-208ENST00000533628 NSUN2Q08J23 767 aaKnown RBP eCLIP12.9□□□□□ -0.34
RPUSD4-208ENST00000533628 TCF15Q12870 199 aa12.9□□□□□ -0.34
RPUSD4-208ENST00000533628 ZBTB17Q13105 803 aa12.9□□□□□ -0.34
RPUSD4-208ENST00000533628 MYLK3Q32MK0 819 aa12.9□□□□□ -0.34
RPUSD4-208ENST00000533628 FAM182AQ5T1J6 154 aa12.9□□□□□ -0.34
RPUSD4-208ENST00000533628 MARC1Q5VT66 337 aa12.9□□□□□ -0.34
RPUSD4-208ENST00000533628 ZC3H18Q86VM9 953 aaKnown RBP12.9□□□□□ -0.34
RPUSD4-208ENST00000533628 WDR5BQ86VZ2 330 aa12.9□□□□□ -0.34
RPUSD4-208ENST00000533628 CNTD1Q8N815 330 aa12.9□□□□□ -0.34
RPUSD4-208ENST00000533628 SLC35B2Q8TB61 432 aa12.9□□□□□ -0.34
RPUSD4-208ENST00000533628 COG1Q8WTW3 980 aa12.9□□□□□ -0.34
RPUSD4-208ENST00000533628 TFB1MQ8WVM0 346 aaKnown RBP12.9□□□□□ -0.34
RPUSD4-208ENST00000533628 OR8D1Q8WZ84 308 aa12.9□□□□□ -0.34
RPUSD4-208ENST00000533628 OSBPL9Q96SU4 736 aa12.9□□□□□ -0.34
RPUSD4-208ENST00000533628 FAM118BQ9BPY3 351 aa12.9□□□□□ -0.34
RPUSD4-208ENST00000533628 MGME1Q9BQP7 344 aa12.9□□□□□ -0.34
RPUSD4-208ENST00000533628 CD93Q9NPY3 652 aa12.9□□□□□ -0.34
RPUSD4-208ENST00000533628 TTC7AQ9ULT0 858 aaPredicted RBP12.9□□□□□ -0.34
RPUSD4-208ENST00000533628 EML5Q05BV3 1969 aa12.9□□□□□ -0.34
RPUSD4-208ENST00000533628 KCNK1O00180 336 aa12.9□□□□□ -0.34
RPUSD4-208ENST00000533628 AXIN1O15169 862 aa12.9□□□□□ -0.34
RPUSD4-208ENST00000533628 BNIP3LO60238 219 aa12.9□□□□□ -0.34
RPUSD4-208ENST00000533628 CEP104O60308 925 aa12.9□□□□□ -0.34
RPUSD4-208ENST00000533628 GJB3O75712 270 aa12.9□□□□□ -0.34
RPUSD4-208ENST00000533628 PRLRP16471 622 aa12.9□□□□□ -0.34
RPUSD4-208ENST00000533628 GKP32189 559 aa12.9□□□□□ -0.34
RPUSD4-208ENST00000533628 MMP13P45452 471 aa12.9□□□□□ -0.34
RPUSD4-208ENST00000533628 RENBPP51606 427 aa12.9□□□□□ -0.34
RPUSD4-208ENST00000533628 METAP1P53582 386 aa12.9□□□□□ -0.34
RPUSD4-208ENST00000533628 AP1B1Q10567 949 aa12.9□□□□□ -0.34
RPUSD4-208ENST00000533628 WASHC5Q12768 1159 aa12.9□□□□□ -0.34
RPUSD4-208ENST00000533628 IHHQ14623 411 aa12.9□□□□□ -0.34
RPUSD4-208ENST00000533628 SLC45A4Q5BKX6 768 aa12.9□□□□□ -0.34
RPUSD4-208ENST00000533628 ZNF776Q68DI1 518 aaPredicted RBP12.9□□□□□ -0.34
RPUSD4-208ENST00000533628 ALG1LQ6GMV1 187 aa12.9□□□□□ -0.34
RPUSD4-208ENST00000533628 MMAAQ8IVH4 418 aaKnown RBP12.9□□□□□ -0.34
RPUSD4-208ENST00000533628 TTC13Q8NBP0 860 aa12.9□□□□□ -0.34
RPUSD4-208ENST00000533628 ZBTB44Q8NCP5 570 aa12.9□□□□□ -0.34
RPUSD4-208ENST00000533628 TMIEQ8NEW7 156 aa12.9□□□□□ -0.34
RPUSD4-208ENST00000533628 FAM131CQ96AQ9 280 aa12.9□□□□□ -0.34
RPUSD4-208ENST00000533628 SIPA1Q96FS4 1042 aa12.9□□□□□ -0.34
RPUSD4-208ENST00000533628 EXOC2Q96KP1 924 aa12.9□□□□□ -0.34
RPUSD4-208ENST00000533628 GDAP1L1Q96MZ0 367 aa12.9□□□□□ -0.34
RPUSD4-208ENST00000533628 HEPHQ9BQS7 1158 aa12.9□□□□□ -0.34
RPUSD4-208ENST00000533628 CINPQ9BW66 212 aaPredicted RBP12.9□□□□□ -0.34
RPUSD4-208ENST00000533628 FAM126AQ9BYI3 521 aaPredicted RBP12.9□□□□□ -0.34
RPUSD4-208ENST00000533628 C10orf88Q9H8K7 445 aa12.9□□□□□ -0.34
RPUSD4-208ENST00000533628 ITM2CQ9NQX7 267 aa12.9□□□□□ -0.34
RPUSD4-208ENST00000533628 RBM22Q9NW64 420 aaKnown RBP eCLIP12.9□□□□□ -0.34
RPUSD4-208ENST00000533628 USP36Q9P275 1121 aaKnown RBP12.9□□□□□ -0.34
RPUSD4-208ENST00000533628 ATP8A1Q9Y2Q0 1164 aa12.9□□□□□ -0.34
RPUSD4-208ENST00000533628 CES2O00748 559 aa12.89□□□□□ -0.35
RPUSD4-208ENST00000533628 POP4O95707 220 aaKnown RBP12.89□□□□□ -0.35
RPUSD4-208ENST00000533628 JCHAINP01591 159 aa12.89□□□□□ -0.35
RPUSD4-208ENST00000533628 IGLV3-19P01714 112 aa12.89□□□□□ -0.35
RPUSD4-208ENST00000533628 HSPA9P38646 679 aaKnown RBP12.89□□□□□ -0.35
RPUSD4-208ENST00000533628 EIF3EP60228 445 aaKnown RBP12.89□□□□□ -0.35
RPUSD4-208ENST00000533628 ETF1P62495 437 aaKnown RBP12.89□□□□□ -0.35
RPUSD4-208ENST00000533628 ZBTB16Q05516 673 aa12.89□□□□□ -0.35
RPUSD4-208ENST00000533628 CST6Q15828 149 aa12.89□□□□□ -0.35
RPUSD4-208ENST00000533628 MAP7D1Q3KQU3 841 aa12.89□□□□□ -0.35
RPUSD4-208ENST00000533628 ARSIQ5FYB1 569 aa12.89□□□□□ -0.35
RPUSD4-208ENST00000533628 CCDC181Q5TID7 509 aa12.89□□□□□ -0.35
RPUSD4-208ENST00000533628 HEATR6Q6AI08 1181 aaKnown RBP12.89□□□□□ -0.35
RPUSD4-208ENST00000533628 LONP2Q86WA8 852 aa12.89□□□□□ -0.35
RPUSD4-208ENST00000533628 OR6K2Q8NGY2 324 aa12.89□□□□□ -0.35
RPUSD4-208ENST00000533628 PRCCQ92733 491 aaPredicted RBP12.89□□□□□ -0.35
RPUSD4-208ENST00000533628 MS4A14Q96JA4 679 aa12.89□□□□□ -0.35
RPUSD4-208ENST00000533628 CCDC114Q96M63 670 aa12.89□□□□□ -0.35
RPUSD4-208ENST00000533628 CPEB1Q9BZB8 566 aaKnown RBP12.89□□□□□ -0.35
RPUSD4-208ENST00000533628 TPSD1Q9BZJ3 242 aa12.89□□□□□ -0.35
RPUSD4-208ENST00000533628 USP29Q9HBJ7 922 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms