RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 ERN2Q76MJ5 926 aaKnown RBP20.77■□□□□ 0.91
CCS-208ENST00000533244 MAP7D3Q8IWC1 876 aa20.77■□□□□ 0.91
CCS-208ENST00000533244 ZCCHC9Q8N567 271 aaKnown RBP20.77■□□□□ 0.91
CCS-208ENST00000533244 SPC24Q8NBT2 197 aa20.77■□□□□ 0.91
CCS-208ENST00000533244 KCTD6Q8NC69 237 aa20.77■□□□□ 0.91
CCS-208ENST00000533244 OR6K2Q8NGY2 324 aa20.77■□□□□ 0.91
CCS-208ENST00000533244 PPP1R16AQ96I34 528 aa20.77■□□□□ 0.91
CCS-208ENST00000533244 EDEM2Q9BV94 578 aa20.77■□□□□ 0.91
CCS-208ENST00000533244 CALN1Q9BXU9 219 aa20.77■□□□□ 0.91
CCS-208ENST00000533244 ZDHHC6Q9H6R6 413 aa20.77■□□□□ 0.91
CCS-208ENST00000533244 KLHL11Q9NVR0 708 aa20.77■□□□□ 0.91
CCS-208ENST00000533244 RCCD1A6NED2 376 aa20.76■□□□□ 0.91
CCS-208ENST00000533244 FAM47DPA6NHR8 397 aa20.76■□□□□ 0.91
CCS-208ENST00000533244 ZNF487B1APH4 448 aa20.76■□□□□ 0.91
CCS-208ENST00000533244 LATO43561 262 aa20.76■□□□□ 0.91
CCS-208ENST00000533244 BUB1BO60566 1050 aaPredicted RBP20.76■□□□□ 0.91
CCS-208ENST00000533244 IGSF6O95976 241 aa20.76■□□□□ 0.91
CCS-208ENST00000533244 SDHBP21912 280 aa20.76■□□□□ 0.91
CCS-208ENST00000533244 KDELR1P24390 212 aa20.76■□□□□ 0.91
CCS-208ENST00000533244 GKP32189 559 aa20.76■□□□□ 0.91
CCS-208ENST00000533244 RFTN1Q14699 578 aaPredicted RBP20.76■□□□□ 0.91
CCS-208ENST00000533244 PAFAH1B3Q15102 231 aaKnown RBP20.76■□□□□ 0.91
CCS-208ENST00000533244 ANKRD20A8PQ5CZ79 823 aa20.76■□□□□ 0.91
CCS-208ENST00000533244 NCBP2-AS2Q69YL0 99 aa20.76■□□□□ 0.91
CCS-208ENST00000533244 VSIG1Q86XK7 387 aa20.76■□□□□ 0.91
CCS-208ENST00000533244 RAPGEF5Q92565 580 aa20.76■□□□□ 0.91
CCS-208ENST00000533244 ZNF599Q96NL3 588 aa20.76■□□□□ 0.91
CCS-208ENST00000533244 EBF2Q9HAK2 575 aa20.76■□□□□ 0.91
CCS-208ENST00000533244 SP110Q9HB58 689 aa20.76■□□□□ 0.91
CCS-208ENST00000533244 PREBQ9HCU5 417 aa20.76■□□□□ 0.91
CCS-208ENST00000533244 DYRK4Q9NR20 520 aa20.76■□□□□ 0.91
CCS-208ENST00000533244 DNAH14Q0VDD8 3507 aa20.76■□□□□ 0.91
CCS-208ENST00000533244 A0A1W2PPC4 97 aa20.75■□□□□ 0.91
CCS-208ENST00000533244 C3orf70A6NLC5 250 aaPredicted RBP20.75■□□□□ 0.91
CCS-208ENST00000533244 CDX4O14627 284 aaPredicted RBP20.75■□□□□ 0.91
CCS-208ENST00000533244 SLC30A4O14863 429 aa20.75■□□□□ 0.91
CCS-208ENST00000533244 BCAT2O15382 392 aaPredicted RBP20.75■□□□□ 0.91
CCS-208ENST00000533244 MAFKO60675 156 aa20.75■□□□□ 0.91
CCS-208ENST00000533244 PEX11BO96011 259 aa20.75■□□□□ 0.91
CCS-208ENST00000533244 CFIP05156 583 aa20.75■□□□□ 0.91
CCS-208ENST00000533244 ENGP17813 658 aa20.75■□□□□ 0.91
CCS-208ENST00000533244 COMTP21964 271 aa20.75■□□□□ 0.91
CCS-208ENST00000533244 PPP2CBP62714 309 aa20.75■□□□□ 0.91
CCS-208ENST00000533244 PPP2CAP67775 309 aa20.75■□□□□ 0.91
CCS-208ENST00000533244 CCDC15Q0P6D6 951 aa20.75■□□□□ 0.91
CCS-208ENST00000533244 PARS2Q7L3T8 475 aaKnown RBP20.75■□□□□ 0.91
CCS-208ENST00000533244 TRIM69Q86WT6 500 aa20.75■□□□□ 0.91
CCS-208ENST00000533244 RYBPQ8N488 228 aaPredicted RBP20.75■□□□□ 0.91
CCS-208ENST00000533244 PQLC3Q8N755 202 aa20.75■□□□□ 0.91
CCS-208ENST00000533244 SNX19Q92543 992 aa20.75■□□□□ 0.91
CCS-208ENST00000533244 OSBPL1AQ9BXW6 950 aa20.75■□□□□ 0.91
CCS-208ENST00000533244 CPEB1Q9BZB8 566 aaKnown RBP20.75■□□□□ 0.91
CCS-208ENST00000533244 MIR1-1HGQ9H1L0 117 aa20.75■□□□□ 0.91
CCS-208ENST00000533244 SALL4Q9UJQ4 1053 aa20.75■□□□□ 0.91
CCS-208ENST00000533244 CDV3Q9UKY7 258 aaKnown RBP20.75■□□□□ 0.91
CCS-208ENST00000533244 PLXNA2O75051 1894 aa20.74■□□□□ 0.91
CCS-208ENST00000533244 BTNL10A8MVZ5 291 aa20.74■□□□□ 0.91
CCS-208ENST00000533244 KRIT1O00522 736 aa20.74■□□□□ 0.91
CCS-208ENST00000533244 MFSD11O43934 449 aa20.74■□□□□ 0.91
CCS-208ENST00000533244 IPO7O95373 1038 aaKnown RBP20.74■□□□□ 0.91
CCS-208ENST00000533244 NOP2P46087 812 aaKnown RBP20.74■□□□□ 0.91
CCS-208ENST00000533244 CSNK1DP48730 415 aa20.74■□□□□ 0.91
CCS-208ENST00000533244 NEK3P51956 506 aa20.74■□□□□ 0.91
CCS-208ENST00000533244 ZNF805Q5CZA5 627 aa20.74■□□□□ 0.91
CCS-208ENST00000533244 STPG1Q5TH74 334 aa20.74■□□□□ 0.91
CCS-208ENST00000533244 C11orf63Q6NUN7 778 aa20.74■□□□□ 0.91
CCS-208ENST00000533244 NEK5Q6P3R8 708 aa20.74■□□□□ 0.91
CCS-208ENST00000533244 LRRC49Q8IUZ0 686 aa20.74■□□□□ 0.91
CCS-208ENST00000533244 RHOT1Q8IXI2 618 aa20.74■□□□□ 0.91
CCS-208ENST00000533244 TM9SF3Q9HD45 589 aa20.74■□□□□ 0.91
CCS-208ENST00000533244 HYOU1Q9Y4L1 999 aa20.74■□□□□ 0.91
CCS-208ENST00000533244 ALG6Q9Y672 507 aa20.74■□□□□ 0.91
CCS-208ENST00000533244 TBC1D3DA0A087WVF3 549 aa20.73■□□□□ 0.91
CCS-208ENST00000533244 TBC1D3IA0A087WXS9 549 aa20.73■□□□□ 0.91
CCS-208ENST00000533244 TBC1D3EA0A087X179 549 aa20.73■□□□□ 0.91
CCS-208ENST00000533244 TBC1D3KA0A087X1G2 549 aa20.73■□□□□ 0.91
CCS-208ENST00000533244 TBC1D3FA6NER0 549 aaPredicted RBP20.73■□□□□ 0.91
CCS-208ENST00000533244 TBC1D3LB9A6J9 549 aa20.73■□□□□ 0.91
CCS-208ENST00000533244 PJA2O43164 708 aa20.73■□□□□ 0.91
CCS-208ENST00000533244 PALMO75781 387 aa20.73■□□□□ 0.91
CCS-208ENST00000533244 TBC1D3HP0C7X1 549 aa20.73■□□□□ 0.91
CCS-208ENST00000533244 ADRB3P13945 408 aa20.73■□□□□ 0.91
CCS-208ENST00000533244 RGRP47804 291 aa20.73■□□□□ 0.91
CCS-208ENST00000533244 ID4P47928 161 aa20.73■□□□□ 0.91
CCS-208ENST00000533244 RAD51Q06609 339 aa20.73■□□□□ 0.91
CCS-208ENST00000533244 GALNT2Q10471 571 aa20.73■□□□□ 0.91
CCS-208ENST00000533244 TMCO4Q5TGY1 634 aa20.73■□□□□ 0.91
CCS-208ENST00000533244 TBC1D3GQ6DHY5 549 aa20.73■□□□□ 0.91
CCS-208ENST00000533244 TBC1D3CQ6IPX1 549 aa20.73■□□□□ 0.91
CCS-208ENST00000533244 TBC1D3Q8IZP1 549 aaPredicted RBP20.73■□□□□ 0.91
CCS-208ENST00000533244 TSEN2Q8NCE0 465 aaKnown RBP20.73■□□□□ 0.91
CCS-208ENST00000533244 ACRBPQ8NEB7 543 aa20.73■□□□□ 0.91
CCS-208ENST00000533244 EXOC2Q96KP1 924 aa20.73■□□□□ 0.91
CCS-208ENST00000533244 RNF157Q96PX1 679 aa20.73■□□□□ 0.91
CCS-208ENST00000533244 PSKH2Q96QS6 385 aa20.73■□□□□ 0.91
CCS-208ENST00000533244 FSCN3Q9NQT6 498 aa20.73■□□□□ 0.91
CCS-208ENST00000533244 ADAMTS9Q9P2N4 1935 aa20.72■□□□□ 0.91
CCS-208ENST00000533244 LRRD1A4D1F6 860 aa20.72■□□□□ 0.91
CCS-208ENST00000533244 ARHGAP33O14559 1287 aa20.72■□□□□ 0.91
CCS-208ENST00000533244 INSIG1O15503 277 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms