RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 HEY1Q9Y5J3 304 aa12.17□□□□□ -0.46
SSBP3-214ENST00000533209 OTOGLQ3ZCN5 2332 aa12.17□□□□□ -0.46
SSBP3-214ENST00000533209 KPNA3O00505 521 aaPredicted RBP12.16□□□□□ -0.46
SSBP3-214ENST00000533209 KRIT1O00522 736 aa12.16□□□□□ -0.46
SSBP3-214ENST00000533209 MATN3O15232 486 aa12.16□□□□□ -0.46
SSBP3-214ENST00000533209 INSIG1O15503 277 aa12.16□□□□□ -0.46
SSBP3-214ENST00000533209 CST8O60676 142 aa12.16□□□□□ -0.46
SSBP3-214ENST00000533209 RNASEH2AO75792 299 aaKnown RBP12.16□□□□□ -0.46
SSBP3-214ENST00000533209 PYGMP11217 842 aa12.16□□□□□ -0.46
SSBP3-214ENST00000533209 MX2P20592 715 aa12.16□□□□□ -0.46
SSBP3-214ENST00000533209 CCNCP24863 283 aa12.16□□□□□ -0.46
SSBP3-214ENST00000533209 PTPN7P35236 360 aa12.16□□□□□ -0.46
SSBP3-214ENST00000533209 CSNK1DP48730 415 aa12.16□□□□□ -0.46
SSBP3-214ENST00000533209 SPDYCQ5MJ68 293 aa12.16□□□□□ -0.46
SSBP3-214ENST00000533209 AGBL4Q5VU57 503 aa12.16□□□□□ -0.46
SSBP3-214ENST00000533209 AADACL2Q6P093 401 aa12.16□□□□□ -0.46
SSBP3-214ENST00000533209 BBS12Q6ZW61 710 aa12.16□□□□□ -0.46
SSBP3-214ENST00000533209 SLC41A1Q8IVJ1 513 aa12.16□□□□□ -0.46
SSBP3-214ENST00000533209 REXO1L1PQ8IX06 675 aa12.16□□□□□ -0.46
SSBP3-214ENST00000533209 PGBD5Q8N414 524 aa12.16□□□□□ -0.46
SSBP3-214ENST00000533209 DEFB119Q8N690 84 aa12.16□□□□□ -0.46
SSBP3-214ENST00000533209 TEX26Q8N6G2 289 aa12.16□□□□□ -0.46
SSBP3-214ENST00000533209 UBL4BQ8N7F7 174 aa12.16□□□□□ -0.46
SSBP3-214ENST00000533209 MAML1Q92585 1016 aa12.16□□□□□ -0.46
SSBP3-214ENST00000533209 FATE1Q969F0 183 aa12.16□□□□□ -0.46
SSBP3-214ENST00000533209 HDAC11Q96DB2 347 aa12.16□□□□□ -0.46
SSBP3-214ENST00000533209 ZNF419Q96HQ0 510 aaPredicted RBP12.16□□□□□ -0.46
SSBP3-214ENST00000533209 LOXL4Q96JB6 756 aa12.16□□□□□ -0.46
SSBP3-214ENST00000533209 OLFM3Q96PB7 478 aa12.16□□□□□ -0.46
SSBP3-214ENST00000533209 PSKH2Q96QS6 385 aa12.16□□□□□ -0.46
SSBP3-214ENST00000533209 HERPUD2Q9BSE4 406 aa12.16□□□□□ -0.46
SSBP3-214ENST00000533209 CINPQ9BW66 212 aaPredicted RBP12.16□□□□□ -0.46
SSBP3-214ENST00000533209 GPR174Q9BXC1 333 aa12.16□□□□□ -0.46
SSBP3-214ENST00000533209 HEMGNQ9BXL5 484 aa12.16□□□□□ -0.46
SSBP3-214ENST00000533209 BTBD1Q9H0C5 482 aa12.16□□□□□ -0.46
SSBP3-214ENST00000533209 SGK2Q9HBY8 427 aa12.16□□□□□ -0.46
SSBP3-214ENST00000533209 SAE1Q9UBE0 346 aaPredicted RBP12.16□□□□□ -0.46
SSBP3-214ENST00000533209 SEPT3Q9UH03 358 aa12.16□□□□□ -0.46
SSBP3-214ENST00000533209 PIEZO1Q92508 2521 aa12.16□□□□□ -0.46
SSBP3-214ENST00000533209 DMDP11532 3685 aa12.16□□□□□ -0.46
SSBP3-214ENST00000533209 ABCA7Q8IZY2 2146 aa12.16□□□□□ -0.46
SSBP3-214ENST00000533209 SDK1Q7Z5N4 2213 aa12.15□□□□□ -0.46
SSBP3-214ENST00000533209 PLXND1Q9Y4D7 1925 aa12.15□□□□□ -0.46
SSBP3-214ENST00000533209 RIF1Q5UIP0 2472 aaKnown RBP12.15□□□□□ -0.46
SSBP3-214ENST00000533209 EP300Q09472 2414 aaPredicted RBP12.15□□□□□ -0.46
SSBP3-214ENST00000533209 C10orf142B7Z368 130 aa12.15□□□□□ -0.46
SSBP3-214ENST00000533209 EPN2O95208 641 aa12.15□□□□□ -0.46
SSBP3-214ENST00000533209 SEMA4FO95754 770 aa12.15□□□□□ -0.46
SSBP3-214ENST00000533209 RETP07949 1114 aa12.15□□□□□ -0.46
SSBP3-214ENST00000533209 PECAM1P16284 738 aaPredicted RBP12.15□□□□□ -0.46
SSBP3-214ENST00000533209 TGM2P21980 687 aa12.15□□□□□ -0.46
SSBP3-214ENST00000533209 ITGB7P26010 798 aa12.15□□□□□ -0.46
SSBP3-214ENST00000533209 PTGER3P43115 390 aa12.15□□□□□ -0.46
SSBP3-214ENST00000533209 DHPSP49366 369 aaPredicted RBP12.15□□□□□ -0.46
SSBP3-214ENST00000533209 RENBPP51606 427 aa12.15□□□□□ -0.46
SSBP3-214ENST00000533209 PPIDQ08752 370 aaKnown RBP12.15□□□□□ -0.46
SSBP3-214ENST00000533209 NSUN2Q08J23 767 aaKnown RBP eCLIP12.15□□□□□ -0.46
SSBP3-214ENST00000533209 CCDC173Q0VFZ6 552 aa12.15□□□□□ -0.46
SSBP3-214ENST00000533209 HNRNPDQ14103 355 aaKnown RBP12.15□□□□□ -0.46
SSBP3-214ENST00000533209 ZNF235Q14590 738 aa12.15□□□□□ -0.46
SSBP3-214ENST00000533209 MARC1Q5VT66 337 aa12.15□□□□□ -0.46
SSBP3-214ENST00000533209 DCAF12L1Q5VU92 463 aa12.15□□□□□ -0.46
SSBP3-214ENST00000533209 TIGD7Q6NT04 549 aaPredicted RBP12.15□□□□□ -0.46
SSBP3-214ENST00000533209 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.15□□□□□ -0.46
SSBP3-214ENST00000533209 SRLQ86TD4 932 aa12.15□□□□□ -0.46
SSBP3-214ENST00000533209 CCDC13Q8IYE1 715 aa12.15□□□□□ -0.46
SSBP3-214ENST00000533209 CADM4Q8NFZ8 388 aa12.15□□□□□ -0.46
SSBP3-214ENST00000533209 UBE2Q2Q8WVN8 375 aa12.15□□□□□ -0.46
SSBP3-214ENST00000533209 LRIG1Q96JA1 1093 aa12.15□□□□□ -0.46
SSBP3-214ENST00000533209 NSMCE3Q96MG7 304 aa12.15□□□□□ -0.46
SSBP3-214ENST00000533209 HSPA12BQ96MM6 686 aa12.15□□□□□ -0.46
SSBP3-214ENST00000533209 LGMNQ99538 433 aa12.15□□□□□ -0.46
SSBP3-214ENST00000533209 MGME1Q9BQP7 344 aa12.15□□□□□ -0.46
SSBP3-214ENST00000533209 HDAC8Q9BY41 377 aa12.15□□□□□ -0.46
SSBP3-214ENST00000533209 CPEB1Q9BZB8 566 aaKnown RBP12.15□□□□□ -0.46
SSBP3-214ENST00000533209 OSBPL8Q9BZF1 889 aa12.15□□□□□ -0.46
SSBP3-214ENST00000533209 PCED1AQ9H1Q7 454 aa12.15□□□□□ -0.46
SSBP3-214ENST00000533209 C6orf106Q9H6K1 298 aaPredicted RBP12.15□□□□□ -0.46
SSBP3-214ENST00000533209 EFR3BQ9Y2G0 817 aa12.15□□□□□ -0.46
SSBP3-214ENST00000533209 TTC24A2A3L6 582 aaPredicted RBP12.14□□□□□ -0.47
SSBP3-214ENST00000533209 SLC7A4O43246 635 aa12.14□□□□□ -0.47
SSBP3-214ENST00000533209 PLRG1O43660 514 aaKnown RBP12.14□□□□□ -0.47
SSBP3-214ENST00000533209 GFRA3O60609 400 aa12.14□□□□□ -0.47
SSBP3-214ENST00000533209 GJB3O75712 270 aa12.14□□□□□ -0.47
SSBP3-214ENST00000533209 UGT2B4P06133 528 aa12.14□□□□□ -0.47
SSBP3-214ENST00000533209 CR2P20023 1033 aa12.14□□□□□ -0.47
SSBP3-214ENST00000533209 HSPA9P38646 679 aaKnown RBP12.14□□□□□ -0.47
SSBP3-214ENST00000533209 MMP13P45452 471 aa12.14□□□□□ -0.47
SSBP3-214ENST00000533209 NR2C2P49116 596 aa12.14□□□□□ -0.47
SSBP3-214ENST00000533209 ADPRHP54922 357 aa12.14□□□□□ -0.47
SSBP3-214ENST00000533209 TAS2R38P59533 333 aa12.14□□□□□ -0.47
SSBP3-214ENST00000533209 RAD51Q06609 339 aa12.14□□□□□ -0.47
SSBP3-214ENST00000533209 ZNF33AQ06730 810 aa12.14□□□□□ -0.47
SSBP3-214ENST00000533209 ZNF211Q13398 564 aaPredicted RBP12.14□□□□□ -0.47
SSBP3-214ENST00000533209 PDK1Q15118 436 aa12.14□□□□□ -0.47
SSBP3-214ENST00000533209 ZNF805Q5CZA5 627 aa12.14□□□□□ -0.47
SSBP3-214ENST00000533209 PIP5KL1Q5T9C9 394 aa12.14□□□□□ -0.47
SSBP3-214ENST00000533209 MEI1Q5TIA1 1274 aa12.14□□□□□ -0.47
SSBP3-214ENST00000533209 LYSMD4Q5XG99 296 aa12.14□□□□□ -0.47
SSBP3-214ENST00000533209 NCEH1Q6PIU2 408 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms