RNA–Protein interactions for RNA: ENST00000532800.1

RPUSD4-207, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 2

Gene RPUSD4, Length 1,030 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-207ENST00000532800 MMP8P22894 467 aa17.38■□□□□ 0.37
RPUSD4-207ENST00000532800 EEF1GP26641 437 aaKnown RBP17.38■□□□□ 0.37
RPUSD4-207ENST00000532800 ADRA1BP35368 520 aa17.38■□□□□ 0.37
RPUSD4-207ENST00000532800 TPRG1LQ5T0D9 272 aa17.38■□□□□ 0.37
RPUSD4-207ENST00000532800 RYBPQ8N488 228 aaPredicted RBP17.38■□□□□ 0.37
RPUSD4-207ENST00000532800 ARHGEF2Q92974 986 aaKnown RBP17.38■□□□□ 0.37
RPUSD4-207ENST00000532800 VOPP1Q96AW1 172 aa17.38■□□□□ 0.37
RPUSD4-207ENST00000532800 IFT43Q96FT9 208 aa17.38■□□□□ 0.37
RPUSD4-207ENST00000532800 FEM1CQ96JP0 617 aa17.38■□□□□ 0.37
RPUSD4-207ENST00000532800 KLF6Q99612 283 aaPredicted RBP17.38■□□□□ 0.37
RPUSD4-207ENST00000532800 NUP62CLQ9H1M0 184 aa17.38■□□□□ 0.37
RPUSD4-207ENST00000532800 PRORYQ9H606 182 aa17.38■□□□□ 0.37
RPUSD4-207ENST00000532800 HS3ST3A1Q9Y663 406 aa17.38■□□□□ 0.37
RPUSD4-207ENST00000532800 COL27A1Q8IZC6 1860 aaPredicted RBP17.37■□□□□ 0.37
RPUSD4-207ENST00000532800 IGLON5A6NGN9 336 aa17.37■□□□□ 0.37
RPUSD4-207ENST00000532800 C2CD4BA6NLJ0 364 aa17.37■□□□□ 0.37
RPUSD4-207ENST00000532800 SCAMP1O15126 338 aa17.37■□□□□ 0.37
RPUSD4-207ENST00000532800 RRP8O43159 456 aaKnown RBP17.37■□□□□ 0.37
RPUSD4-207ENST00000532800 SPINT1O43278 529 aa17.37■□□□□ 0.37
RPUSD4-207ENST00000532800 OPA1O60313 960 aa17.37■□□□□ 0.37
RPUSD4-207ENST00000532800 LRIG2O94898 1065 aa17.37■□□□□ 0.37
RPUSD4-207ENST00000532800 RHOQP17081 205 aa17.37■□□□□ 0.37
RPUSD4-207ENST00000532800 SDC4P31431 198 aa17.37■□□□□ 0.37
RPUSD4-207ENST00000532800 HNRNPKP61978 463 aaKnown RBP eCLIP17.37■□□□□ 0.37
RPUSD4-207ENST00000532800 CDR2Q01850 454 aa17.37■□□□□ 0.37
RPUSD4-207ENST00000532800 NRG1Q02297 640 aaPredicted RBP17.37■□□□□ 0.37
RPUSD4-207ENST00000532800 CDCP2Q5VXM1 449 aa17.37■□□□□ 0.37
RPUSD4-207ENST00000532800 ZNF677Q86XU0 584 aa17.37■□□□□ 0.37
RPUSD4-207ENST00000532800 CCDC185Q8N715 623 aa17.37■□□□□ 0.37
RPUSD4-207ENST00000532800 ZNF548Q8NEK5 533 aaPredicted RBP17.37■□□□□ 0.37
RPUSD4-207ENST00000532800 FAM174AQ8TBP5 190 aa17.37■□□□□ 0.37
RPUSD4-207ENST00000532800 BAP1Q92560 729 aa17.37■□□□□ 0.37
RPUSD4-207ENST00000532800 FGF11Q92914 225 aa17.37■□□□□ 0.37
RPUSD4-207ENST00000532800 ISG20Q96AZ6 181 aaKnown RBP17.37■□□□□ 0.37
RPUSD4-207ENST00000532800 VPS16Q9H269 839 aa17.37■□□□□ 0.37
RPUSD4-207ENST00000532800 NLRC4Q9NPP4 1024 aa17.37■□□□□ 0.37
RPUSD4-207ENST00000532800 TMEM248Q9NWD8 314 aa17.37■□□□□ 0.37
RPUSD4-207ENST00000532800 CHMP5Q9NZZ3 219 aa17.37■□□□□ 0.37
RPUSD4-207ENST00000532800 KLF15Q9UIH9 416 aa17.37■□□□□ 0.37
RPUSD4-207ENST00000532800 GCN1Q92616 2671 aaKnown RBP17.37■□□□□ 0.37
RPUSD4-207ENST00000532800 SPTY2D1-AS1A0A0U1RR47 76 aa17.36■□□□□ 0.37
RPUSD4-207ENST00000532800 EIF4E1BA6NMX2 242 aaKnown RBP17.36■□□□□ 0.37
RPUSD4-207ENST00000532800 C16orf96A6NNT2 1141 aa17.36■□□□□ 0.37
RPUSD4-207ENST00000532800 KRIT1O00522 736 aa17.36■□□□□ 0.37
RPUSD4-207ENST00000532800 CSF2P04141 144 aa17.36■□□□□ 0.37
RPUSD4-207ENST00000532800 PRB1P04280 392 aa17.36■□□□□ 0.37
RPUSD4-207ENST00000532800 UGT2B4P06133 528 aa17.36■□□□□ 0.37
RPUSD4-207ENST00000532800 NME1P15531 152 aaKnown RBP17.36■□□□□ 0.37
RPUSD4-207ENST00000532800 RABIFP47224 123 aa17.36■□□□□ 0.37
RPUSD4-207ENST00000532800 MAPKAPK2P49137 400 aa17.36■□□□□ 0.37
RPUSD4-207ENST00000532800 HDAC4P56524 1084 aa17.36■□□□□ 0.37
RPUSD4-207ENST00000532800 JAM2P57087 298 aa17.36■□□□□ 0.37
RPUSD4-207ENST00000532800 POLR2FP61218 127 aaKnown RBP17.36■□□□□ 0.37
RPUSD4-207ENST00000532800 CCDC173Q0VFZ6 552 aa17.36■□□□□ 0.37
RPUSD4-207ENST00000532800 PTP4A2Q12974 167 aa17.36■□□□□ 0.37
RPUSD4-207ENST00000532800 TBC1D25Q3MII6 688 aa17.36■□□□□ 0.37
RPUSD4-207ENST00000532800 ARL13BQ3SXY8 428 aa17.36■□□□□ 0.37
RPUSD4-207ENST00000532800 LRRC73Q5JTD7 316 aa17.36■□□□□ 0.37
RPUSD4-207ENST00000532800 ATXN7L2Q5T6C5 722 aaPredicted RBP17.36■□□□□ 0.37
RPUSD4-207ENST00000532800 PARGQ86W56 976 aa17.36■□□□□ 0.37
RPUSD4-207ENST00000532800 DCP2Q8IU60 420 aaKnown RBP17.36■□□□□ 0.37
RPUSD4-207ENST00000532800 FAM181AQ8N9Y4 354 aa17.36■□□□□ 0.37
RPUSD4-207ENST00000532800 TBC1D31Q96DN5 1066 aa17.36■□□□□ 0.37
RPUSD4-207ENST00000532800 UBL7Q96S82 380 aaPredicted RBP17.36■□□□□ 0.37
RPUSD4-207ENST00000532800 C1QTNF2Q9BXJ5 285 aa17.36■□□□□ 0.37
RPUSD4-207ENST00000532800 OSBPL2Q9H1P3 480 aa17.36■□□□□ 0.37
RPUSD4-207ENST00000532800 FAM207AQ9NSI2 230 aaPredicted RBP17.36■□□□□ 0.37
RPUSD4-207ENST00000532800 NEMP2A6NFY4 417 aa17.35■□□□□ 0.37
RPUSD4-207ENST00000532800 FPGTO14772 594 aa17.35■□□□□ 0.37
RPUSD4-207ENST00000532800 MPOP05164 745 aa17.35■□□□□ 0.37
RPUSD4-207ENST00000532800 PLEKP08567 350 aaPredicted RBP17.35■□□□□ 0.37
RPUSD4-207ENST00000532800 ACTN2P35609 894 aa17.35■□□□□ 0.37
RPUSD4-207ENST00000532800 SOX5P35711 763 aa17.35■□□□□ 0.37
RPUSD4-207ENST00000532800 ETFBP38117 255 aa17.35■□□□□ 0.37
RPUSD4-207ENST00000532800 PTPN9P43378 593 aa17.35■□□□□ 0.37
RPUSD4-207ENST00000532800 SGCGQ13326 291 aa17.35■□□□□ 0.37
RPUSD4-207ENST00000532800 PDE1CQ14123 709 aaPredicted RBP17.35■□□□□ 0.37
RPUSD4-207ENST00000532800 KRT31Q15323 416 aa17.35■□□□□ 0.37
RPUSD4-207ENST00000532800 ZNF805Q5CZA5 627 aa17.35■□□□□ 0.37
RPUSD4-207ENST00000532800 STRADAQ7RTN6 431 aa17.35■□□□□ 0.37
RPUSD4-207ENST00000532800 PLPP6Q8IY26 295 aa17.35■□□□□ 0.37
RPUSD4-207ENST00000532800 NETO2Q8NC67 525 aa17.35■□□□□ 0.37
RPUSD4-207ENST00000532800 OR2AP1Q8NGE2 309 aa17.35■□□□□ 0.37
RPUSD4-207ENST00000532800 IFI44Q8TCB0 444 aa17.35■□□□□ 0.37
RPUSD4-207ENST00000532800 FAM172AQ8WUF8 416 aa17.35■□□□□ 0.37
RPUSD4-207ENST00000532800 FCRL3Q96P31 734 aaPredicted RBP17.35■□□□□ 0.37
RPUSD4-207ENST00000532800 LENG8Q96PV6 779 aaPredicted RBP17.35■□□□□ 0.37
RPUSD4-207ENST00000532800 PCDHB18PQ96TA0 734 aa17.35■□□□□ 0.37
RPUSD4-207ENST00000532800 KALRNO60229 2985 aa17.35■□□□□ 0.37
RPUSD4-207ENST00000532800 MGAQ8IWI9 3026 aa17.35■□□□□ 0.37
RPUSD4-207ENST00000532800 CXorf51AA0A1B0GTR3 108 aa17.34■□□□□ 0.37
RPUSD4-207ENST00000532800 NEMP1O14524 444 aa17.34■□□□□ 0.37
RPUSD4-207ENST00000532800 TSPAN6O43657 245 aa17.34■□□□□ 0.37
RPUSD4-207ENST00000532800 RAMP2O60895 175 aa17.34■□□□□ 0.37
RPUSD4-207ENST00000532800 CSO75390 466 aaKnown RBP17.34■□□□□ 0.37
RPUSD4-207ENST00000532800 GSRP00390 522 aa17.34■□□□□ 0.37
RPUSD4-207ENST00000532800 GP1BAP07359 652 aa17.34■□□□□ 0.37
RPUSD4-207ENST00000532800 UNGP13051 313 aaPredicted RBP17.34■□□□□ 0.37
RPUSD4-207ENST00000532800 PFN3P60673 137 aa17.34■□□□□ 0.37
RPUSD4-207ENST00000532800 EIF2B5Q13144 721 aaKnown RBP17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms