RNA–Protein interactions for RNA: ENST00000532550.1

PHRF1-204, Transcript of PHD and ring finger domains 1, humanhuman

TSL 3

Gene PHRF1, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-204ENST00000532550 NFKBIBQ15653 356 aa17.52■□□□□ 0.4
PHRF1-204ENST00000532550 INO80DQ53TQ3 878 aaPredicted RBP17.52■□□□□ 0.4
PHRF1-204ENST00000532550 IQCHQ86VS3 1027 aa17.52■□□□□ 0.4
PHRF1-204ENST00000532550 ARFGAP1Q8N6T3 406 aa17.52■□□□□ 0.4
PHRF1-204ENST00000532550 KLK6Q92876 244 aa17.52■□□□□ 0.4
PHRF1-204ENST00000532550 HMCESQ96FZ2 354 aa17.52■□□□□ 0.4
PHRF1-204ENST00000532550 FEM1CQ96JP0 617 aa17.52■□□□□ 0.4
PHRF1-204ENST00000532550 TRIM7Q9C029 511 aa17.52■□□□□ 0.4
PHRF1-204ENST00000532550 WASF3Q9UPY6 502 aa17.52■□□□□ 0.4
PHRF1-204ENST00000532550 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.52■□□□□ 0.43e-9■□□□□ 11.3
PHRF1-204ENST00000532550 C16orf96A6NNT2 1141 aa17.51■□□□□ 0.39
PHRF1-204ENST00000532550 YKT6O15498 198 aa17.51■□□□□ 0.39
PHRF1-204ENST00000532550 HYAL3O43820 417 aaPredicted RBP17.51■□□□□ 0.39
PHRF1-204ENST00000532550 TMCC1O94876 653 aa17.51■□□□□ 0.39
PHRF1-204ENST00000532550 ITGAVP06756 1048 aa17.51■□□□□ 0.39
PHRF1-204ENST00000532550 FTH1P19P0C7X4 201 aa17.51■□□□□ 0.39
PHRF1-204ENST00000532550 ADRB3P13945 408 aa17.51■□□□□ 0.39
PHRF1-204ENST00000532550 GKP32189 559 aa17.51■□□□□ 0.39
PHRF1-204ENST00000532550 NDST2P52849 883 aa17.51■□□□□ 0.39
PHRF1-204ENST00000532550 NXPH1P58417 271 aa17.51■□□□□ 0.39
PHRF1-204ENST00000532550 SERINC3Q13530 473 aa17.51■□□□□ 0.39
PHRF1-204ENST00000532550 ACAP1Q15027 740 aa17.51■□□□□ 0.39
PHRF1-204ENST00000532550 CA9Q16790 459 aa17.51■□□□□ 0.39
PHRF1-204ENST00000532550 INAVAQ3KP66 663 aa17.51■□□□□ 0.39
PHRF1-204ENST00000532550 ZNF805Q5CZA5 627 aa17.51■□□□□ 0.39
PHRF1-204ENST00000532550 GLRX5Q86SX6 157 aa17.51■□□□□ 0.39
PHRF1-204ENST00000532550 PSTKQ8IV42 348 aaKnown RBP17.51■□□□□ 0.39
PHRF1-204ENST00000532550 OXR1Q8N573 874 aa17.51■□□□□ 0.39
PHRF1-204ENST00000532550 OR6K2Q8NGY2 324 aa17.51■□□□□ 0.39
PHRF1-204ENST00000532550 KLHDC7BQ96G42 594 aa17.51■□□□□ 0.39
PHRF1-204ENST00000532550 GDAP1L1Q96MZ0 367 aa17.51■□□□□ 0.39
PHRF1-204ENST00000532550 SNRNP25Q9BV90 132 aaKnown RBP17.51■□□□□ 0.39
PHRF1-204ENST00000532550 OSBPL1AQ9BXW6 950 aa17.51■□□□□ 0.39
PHRF1-204ENST00000532550 CEP295Q9C0D2 2601 aa17.51■□□□□ 0.39
PHRF1-204ENST00000532550 KLC2Q9H0B6 622 aa17.51■□□□□ 0.39
PHRF1-204ENST00000532550 ERVMER34-1Q9H9K5 563 aa17.51■□□□□ 0.39
PHRF1-204ENST00000532550 TP53BP1Q12888 1972 aaPredicted RBP17.5■□□□□ 0.39
PHRF1-204ENST00000532550 IGSF6O95976 241 aa17.5■□□□□ 0.39
PHRF1-204ENST00000532550 PRLRP16471 622 aa17.5■□□□□ 0.39
PHRF1-204ENST00000532550 AKT2P31751 481 aa17.5■□□□□ 0.39
PHRF1-204ENST00000532550 CASP14P31944 242 aa17.5■□□□□ 0.39
PHRF1-204ENST00000532550 RHOAP61586 193 aa17.5■□□□□ 0.39
PHRF1-204ENST00000532550 RPS21P63220 83 aaKnown RBP17.5■□□□□ 0.39
PHRF1-204ENST00000532550 ZNF284Q2VY69 593 aa17.5■□□□□ 0.39
PHRF1-204ENST00000532550 PPP6R3Q5H9R7 873 aaPredicted RBP17.5■□□□□ 0.39
PHRF1-204ENST00000532550 ATXN7L2Q5T6C5 722 aaPredicted RBP17.5■□□□□ 0.39
PHRF1-204ENST00000532550 CHCHD4Q8N4Q1 142 aa17.5■□□□□ 0.39
PHRF1-204ENST00000532550 PNPLA1Q8N8W4 532 aa17.5■□□□□ 0.39
PHRF1-204ENST00000532550 RAB7BQ96AH8 199 aa17.5■□□□□ 0.39
PHRF1-204ENST00000532550 PEBP4Q96S96 227 aa17.5■□□□□ 0.39
PHRF1-204ENST00000532550 KCTD15Q96SI1 283 aaPredicted RBP17.5■□□□□ 0.39
PHRF1-204ENST00000532550 XPO4Q9C0E2 1151 aaKnown RBP17.5■□□□□ 0.39
PHRF1-204ENST00000532550 BTBD3Q9Y2F9 522 aa17.5■□□□□ 0.39
PHRF1-204ENST00000532550 FADS3Q9Y5Q0 445 aa17.5■□□□□ 0.39
PHRF1-204ENST00000532550 ARHGAP42A6NI28 874 aa17.49■□□□□ 0.39
PHRF1-204ENST00000532550 NEMP1O14524 444 aa17.49■□□□□ 0.39
PHRF1-204ENST00000532550 CBFA2T2O43439 604 aa17.49■□□□□ 0.39
PHRF1-204ENST00000532550 AP1G1O43747 822 aa17.49■□□□□ 0.39
PHRF1-204ENST00000532550 LRCH4O75427 683 aa17.49■□□□□ 0.39
PHRF1-204ENST00000532550 UGT2B4P06133 528 aa17.49■□□□□ 0.39
PHRF1-204ENST00000532550 HNRNPA2B1P22626 353 aaKnown RBP17.49■□□□□ 0.39
PHRF1-204ENST00000532550 PCK1P35558 622 aa17.49■□□□□ 0.39
PHRF1-204ENST00000532550 ZNF135P52742 658 aaPredicted RBP17.49■□□□□ 0.39
PHRF1-204ENST00000532550 MAPK8IP2Q13387 824 aaPredicted RBP17.49■□□□□ 0.39
PHRF1-204ENST00000532550 PIGHQ14442 188 aaPredicted RBP17.49■□□□□ 0.39
PHRF1-204ENST00000532550 BOLA3Q53S33 107 aa17.49■□□□□ 0.39
PHRF1-204ENST00000532550 CCDC122Q5T0U0 273 aa17.49■□□□□ 0.39
PHRF1-204ENST00000532550 SEL1L3Q68CR1 1132 aa17.49■□□□□ 0.39
PHRF1-204ENST00000532550 KIAA1161Q6NSJ0 714 aa17.49■□□□□ 0.39
PHRF1-204ENST00000532550 GDPD4Q6W3E5 623 aa17.49■□□□□ 0.39
PHRF1-204ENST00000532550 RFX8Q6ZV50 586 aa17.49■□□□□ 0.39
PHRF1-204ENST00000532550 PARS2Q7L3T8 475 aaKnown RBP17.49■□□□□ 0.39
PHRF1-204ENST00000532550 SLCO6A1Q86UG4 719 aa17.49■□□□□ 0.39
PHRF1-204ENST00000532550 GATAD2AQ86YP4 633 aa17.49■□□□□ 0.39
PHRF1-204ENST00000532550 NETO2Q8NC67 525 aa17.49■□□□□ 0.39
PHRF1-204ENST00000532550 BAHD1Q8TBE0 780 aaPredicted RBP17.49■□□□□ 0.39
PHRF1-204ENST00000532550 ADAMTS14Q8WXS8 1223 aa17.49■□□□□ 0.39
PHRF1-204ENST00000532550 CELF6Q96J87 481 aaKnown RBP17.49■□□□□ 0.39
PHRF1-204ENST00000532550 KLHL32Q96NJ5 620 aa17.49■□□□□ 0.39
PHRF1-204ENST00000532550 MYOCQ99972 504 aa17.49■□□□□ 0.39
PHRF1-204ENST00000532550 SLC17A9Q9BYT1 436 aa17.49■□□□□ 0.39
PHRF1-204ENST00000532550 SLC39A8Q9C0K1 460 aa17.49■□□□□ 0.39
PHRF1-204ENST00000532550 LRRC19Q9H756 370 aa17.49■□□□□ 0.39
PHRF1-204ENST00000532550 UBA2Q9UBT2 640 aaPredicted RBP17.49■□□□□ 0.39
PHRF1-204ENST00000532550 ZFR2Q9UPR6 939 aaKnown RBP17.49■□□□□ 0.39
PHRF1-204ENST00000532550 CA5BQ9Y2D0 317 aa17.49■□□□□ 0.39
PHRF1-204ENST00000532550 NEUROG3Q9Y4Z2 214 aa17.49■□□□□ 0.39
PHRF1-204ENST00000532550 MAP1BP46821 2468 aaKnown RBP17.49■□□□□ 0.39
PHRF1-204ENST00000532550 EPG5Q9HCE0 2579 aa17.48■□□□□ 0.39
PHRF1-204ENST00000532550 A0A087X0T9 212 aa17.48■□□□□ 0.39
PHRF1-204ENST00000532550 GOLGA8CPA6NN73 597 aa17.48■□□□□ 0.39
PHRF1-204ENST00000532550 TNFSF14O43557 240 aa17.48■□□□□ 0.39
PHRF1-204ENST00000532550 TSPAN6O43657 245 aa17.48■□□□□ 0.39
PHRF1-204ENST00000532550 PAK4O96013 591 aaPredicted RBP17.48■□□□□ 0.39
PHRF1-204ENST00000532550 GYPCP04921 128 aa17.48■□□□□ 0.39
PHRF1-204ENST00000532550 FAM228BP0C875 321 aa17.48■□□□□ 0.39
PHRF1-204ENST00000532550 THEGLP0DJG4 465 aa17.48■□□□□ 0.39
PHRF1-204ENST00000532550 ERCC2P18074 760 aa17.48■□□□□ 0.39
PHRF1-204ENST00000532550 RXRGP48443 463 aa17.48■□□□□ 0.39
PHRF1-204ENST00000532550 HCAR3P49019 387 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms