RNA–Protein interactions for RNA: ENST00000532171.5

CAPN11-204, Transcript of calpain 11, human

TSL 4

Gene CAPN11, Length 585 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CAPN11-204	ENST00000532171	RALGAPA1	Q6GYQ0	2036 aa		11.65	□□□□□ -0.54
CAPN11-204	ENST00000532171	SPTBN4	Q9H254	2564 aa		11.64	□□□□□ -0.55
CAPN11-204	ENST00000532171	FAM47DP	A6NHR8	397 aa		11.64	□□□□□ -0.55
CAPN11-204	ENST00000532171	C3orf70	A6NLC5	250 aa	Predicted RBP	11.64	□□□□□ -0.55
CAPN11-204	ENST00000532171	KRIT1	O00522	736 aa		11.64	□□□□□ -0.55
CAPN11-204	ENST00000532171	KHNYN	O15037	678 aa	Known RBP	11.64	□□□□□ -0.55
CAPN11-204	ENST00000532171	PJA2	O43164	708 aa		11.64	□□□□□ -0.55
CAPN11-204	ENST00000532171	PLRG1	O43660	514 aa	Known RBP	11.64	□□□□□ -0.55
CAPN11-204	ENST00000532171	PALM	O75781	387 aa		11.64	□□□□□ -0.55
CAPN11-204	ENST00000532171	FSBP	O95073	299 aa		11.64	□□□□□ -0.55
CAPN11-204	ENST00000532171	IGHV4-34	P06331	123 aa		11.64	□□□□□ -0.55
CAPN11-204	ENST00000532171	TNNT1	P13805	278 aa		11.64	□□□□□ -0.55
CAPN11-204	ENST00000532171	MAOB	P27338	520 aa		11.64	□□□□□ -0.55
CAPN11-204	ENST00000532171	GK	P32189	559 aa		11.64	□□□□□ -0.55
CAPN11-204	ENST00000532171	GALNT2	Q10471	571 aa		11.64	□□□□□ -0.55
CAPN11-204	ENST00000532171	MYLK3	Q32MK0	819 aa		11.64	□□□□□ -0.55
CAPN11-204	ENST00000532171	AASDH	Q4L235	1098 aa	Predicted RBP	11.64	□□□□□ -0.55
CAPN11-204	ENST00000532171	TRIM61	Q5EBN2	209 aa		11.64	□□□□□ -0.55
CAPN11-204	ENST00000532171	TMCO4	Q5TGY1	634 aa		11.64	□□□□□ -0.55
CAPN11-204	ENST00000532171	RAB11FIP1	Q6WKZ4	1283 aa	Predicted RBP	11.64	□□□□□ -0.55
CAPN11-204	ENST00000532171	ERN2	Q76MJ5	926 aa	Known RBP	11.64	□□□□□ -0.55
CAPN11-204	ENST00000532171	DAAM2	Q86T65	1068 aa		11.64	□□□□□ -0.55
CAPN11-204	ENST00000532171	KIAA1328	Q86T90	577 aa		11.64	□□□□□ -0.55
CAPN11-204	ENST00000532171	TXLNB	Q8N3L3	684 aa		11.64	□□□□□ -0.55
CAPN11-204	ENST00000532171	ZCCHC9	Q8N567	271 aa	Known RBP	11.64	□□□□□ -0.55
CAPN11-204	ENST00000532171	PQLC3	Q8N755	202 aa		11.64	□□□□□ -0.55
CAPN11-204	ENST00000532171	CEP76	Q8TAP6	659 aa		11.64	□□□□□ -0.55
CAPN11-204	ENST00000532171	BIRC7	Q96CA5	298 aa		11.64	□□□□□ -0.55
CAPN11-204	ENST00000532171	CALR3	Q96L12	384 aa	Known RBP	11.64	□□□□□ -0.55
CAPN11-204	ENST00000532171	ZNF599	Q96NL3	588 aa		11.64	□□□□□ -0.55
CAPN11-204	ENST00000532171	CINP	Q9BW66	212 aa	Predicted RBP	11.64	□□□□□ -0.55
CAPN11-204	ENST00000532171	OSBPL1A	Q9BXW6	950 aa		11.64	□□□□□ -0.55
CAPN11-204	ENST00000532171	HDAC8	Q9BY41	377 aa		11.64	□□□□□ -0.55
CAPN11-204	ENST00000532171	KDM4C	Q9H3R0	1056 aa		11.64	□□□□□ -0.55
CAPN11-204	ENST00000532171	DDX56	Q9NY93	547 aa	Known RBP	11.64	□□□□□ -0.55
CAPN11-204	ENST00000532171	SUSD2	Q9UGT4	822 aa		11.64	□□□□□ -0.55
CAPN11-204	ENST00000532171	ALG6	Q9Y672	507 aa		11.64	□□□□□ -0.55
CAPN11-204	ENST00000532171	DUSP10	Q9Y6W6	482 aa		11.64	□□□□□ -0.55
CAPN11-204	ENST00000532171	DCHS1	Q96JQ0	3298 aa		11.63	□□□□□ -0.55
CAPN11-204	ENST00000532171	LNP1	A1A4G5	178 aa		11.63	□□□□□ -0.55
CAPN11-204	ENST00000532171	GOLGA6L3	A6NEY3	463 aa		11.63	□□□□□ -0.55
CAPN11-204	ENST00000532171	MAFK	O60675	156 aa		11.63	□□□□□ -0.55
CAPN11-204	ENST00000532171	POP4	O95707	220 aa	Known RBP	11.63	□□□□□ -0.55
CAPN11-204	ENST00000532171	PEX11B	O96011	259 aa		11.63	□□□□□ -0.55
CAPN11-204	ENST00000532171	CFI	P05156	583 aa		11.63	□□□□□ -0.55
CAPN11-204	ENST00000532171	UGT2B4	P06133	528 aa		11.63	□□□□□ -0.55
CAPN11-204	ENST00000532171	GNS	P15586	552 aa		11.63	□□□□□ -0.55
CAPN11-204	ENST00000532171	RGR	P47804	291 aa		11.63	□□□□□ -0.55
CAPN11-204	ENST00000532171	NEK3	P51956	506 aa		11.63	□□□□□ -0.55
CAPN11-204	ENST00000532171	TAS2R38	P59533	333 aa		11.63	□□□□□ -0.55
CAPN11-204	ENST00000532171	PPP2CB	P62714	309 aa		11.63	□□□□□ -0.55
CAPN11-204	ENST00000532171	PPP2CA	P67775	309 aa		11.63	□□□□□ -0.55
CAPN11-204	ENST00000532171	GBE1	Q04446	702 aa		11.63	□□□□□ -0.55
CAPN11-204	ENST00000532171	CCDC15	Q0P6D6	951 aa		11.63	□□□□□ -0.55
CAPN11-204	ENST00000532171	DUOXA1	Q1HG43	343 aa		11.63	□□□□□ -0.55
CAPN11-204	ENST00000532171	ODF2	Q5BJF6	829 aa		11.63	□□□□□ -0.55
CAPN11-204	ENST00000532171	ZNF805	Q5CZA5	627 aa		11.63	□□□□□ -0.55
CAPN11-204	ENST00000532171	SLC23A3	Q6PIS1	610 aa		11.63	□□□□□ -0.55
CAPN11-204	ENST00000532171	PARS2	Q7L3T8	475 aa	Known RBP	11.63	□□□□□ -0.55
CAPN11-204	ENST00000532171	LRRC49	Q8IUZ0	686 aa		11.63	□□□□□ -0.55
CAPN11-204	ENST00000532171	TSEN2	Q8NCE0	465 aa	Known RBP	11.63	□□□□□ -0.55
CAPN11-204	ENST00000532171	CCDC112	Q8NEF3	446 aa		11.63	□□□□□ -0.55
CAPN11-204	ENST00000532171	C1orf216	Q8TAB5	229 aa		11.63	□□□□□ -0.55
CAPN11-204	ENST00000532171	RNF157	Q96PX1	679 aa		11.63	□□□□□ -0.55
CAPN11-204	ENST00000532171	PSKH2	Q96QS6	385 aa		11.63	□□□□□ -0.55
CAPN11-204	ENST00000532171	EDEM2	Q9BV94	578 aa		11.63	□□□□□ -0.55
CAPN11-204	ENST00000532171	MIR1-1HG	Q9H1L0	117 aa		11.63	□□□□□ -0.55
CAPN11-204	ENST00000532171	CAPN10	Q9HC96	672 aa		11.63	□□□□□ -0.55
CAPN11-204	ENST00000532171	PREB	Q9HCU5	417 aa		11.63	□□□□□ -0.55
CAPN11-204	ENST00000532171	SEPT3	Q9UH03	358 aa		11.63	□□□□□ -0.55
CAPN11-204	ENST00000532171	EIF2B4	Q9UI10	523 aa	Known RBP	11.63	□□□□□ -0.55
CAPN11-204	ENST00000532171	TPX2	Q9ULW0	747 aa	Known RBP	11.63	□□□□□ -0.55
CAPN11-204	ENST00000532171	DNAH14	Q0VDD8	3507 aa		11.63	□□□□□ -0.55
CAPN11-204	ENST00000532171	CACNA1E	Q15878	2313 aa		11.62	□□□□□ -0.55
CAPN11-204	ENST00000532171	PCDH15	Q96QU1	1955 aa		11.62	□□□□□ -0.55
CAPN11-204	ENST00000532171	TBC1D3D	A0A087WVF3	549 aa		11.62	□□□□□ -0.55
CAPN11-204	ENST00000532171	TBC1D3I	A0A087WXS9	549 aa		11.62	□□□□□ -0.55
CAPN11-204	ENST00000532171	TBC1D3E	A0A087X179	549 aa		11.62	□□□□□ -0.55
CAPN11-204	ENST00000532171	TBC1D3K	A0A087X1G2	549 aa		11.62	□□□□□ -0.55
CAPN11-204	ENST00000532171		A0A1B0GTW7	788 aa		11.62	□□□□□ -0.55
CAPN11-204	ENST00000532171	TBC1D3F	A6NER0	549 aa	Predicted RBP	11.62	□□□□□ -0.55
CAPN11-204	ENST00000532171	PRR5-ARHGAP8	B1AHC4	643 aa		11.62	□□□□□ -0.55
CAPN11-204	ENST00000532171	TBC1D3L	B9A6J9	549 aa		11.62	□□□□□ -0.55
CAPN11-204	ENST00000532171	MUSK	O15146	869 aa		11.62	□□□□□ -0.55
CAPN11-204	ENST00000532171	INSIG1	O15503	277 aa		11.62	□□□□□ -0.55
CAPN11-204	ENST00000532171	ARHGAP6	O43182	974 aa		11.62	□□□□□ -0.55
CAPN11-204	ENST00000532171	LAT	O43561	262 aa		11.62	□□□□□ -0.55
CAPN11-204	ENST00000532171	GDF9	O60383	454 aa		11.62	□□□□□ -0.55
CAPN11-204	ENST00000532171	MAP3K6	O95382	1288 aa		11.62	□□□□□ -0.55
CAPN11-204	ENST00000532171	SERPINF2	P08697	491 aa		11.62	□□□□□ -0.55
CAPN11-204	ENST00000532171	TBC1D3H	P0C7X1	549 aa		11.62	□□□□□ -0.55
CAPN11-204	ENST00000532171	ADRB3	P13945	408 aa		11.62	□□□□□ -0.55
CAPN11-204	ENST00000532171	CD27	P26842	260 aa		11.62	□□□□□ -0.55
CAPN11-204	ENST00000532171	GARS	P41250	739 aa	Known RBP	11.62	□□□□□ -0.55
CAPN11-204	ENST00000532171	CSNK1D	P48730	415 aa		11.62	□□□□□ -0.55
CAPN11-204	ENST00000532171	MARCKSL1	P49006	195 aa		11.62	□□□□□ -0.55
CAPN11-204	ENST00000532171	CCR5	P51681	352 aa		11.62	□□□□□ -0.55
CAPN11-204	ENST00000532171	NAP1L1	P55209	391 aa	Known RBP	11.62	□□□□□ -0.55
CAPN11-204	ENST00000532171	IRX4	P78413	519 aa		11.62	□□□□□ -0.55
CAPN11-204	ENST00000532171	ARHGAP8	P85298	464 aa		11.62	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms