RNA–Protein interactions for RNA: ENST00000531303.5

SMPD1-205, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,451 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-205ENST00000531303 SERPINA13PQ6UXR4 307 aa19.31■□□□□ 0.68
SMPD1-205ENST00000531303 KDELC2Q7Z4H8 507 aa19.31■□□□□ 0.68
SMPD1-205ENST00000531303 METTL3Q86U44 580 aaKnown RBP19.31■□□□□ 0.68
SMPD1-205ENST00000531303 ZNF513Q8N8E2 541 aaPredicted RBP19.31■□□□□ 0.68
SMPD1-205ENST00000531303 ARRDC2Q8TBH0 407 aa19.31■□□□□ 0.68
SMPD1-205ENST00000531303 OXNAD1Q96HP4 312 aaPredicted RBP19.31■□□□□ 0.68
SMPD1-205ENST00000531303 FCRL5Q96RD9 977 aa19.31■□□□□ 0.68
SMPD1-205ENST00000531303 GORASP1Q9BQQ3 440 aa19.31■□□□□ 0.68
SMPD1-205ENST00000531303 SLC25A51Q9H1U9 297 aa19.31■□□□□ 0.68
SMPD1-205ENST00000531303 NOD2Q9HC29 1040 aa19.31■□□□□ 0.68
SMPD1-205ENST00000531303 ARHGEF3Q9NR81 526 aa19.31■□□□□ 0.68
SMPD1-205ENST00000531303 EVLQ9UI08 416 aaPredicted RBP19.31■□□□□ 0.68
SMPD1-205ENST00000531303 ANAPC5Q9UJX4 755 aa19.31■□□□□ 0.68
SMPD1-205ENST00000531303 TPX2Q9ULW0 747 aaKnown RBP19.31■□□□□ 0.68
SMPD1-205ENST00000531303 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP19.3■□□□□ 0.68
SMPD1-205ENST00000531303 DNALI1O14645 258 aaPredicted RBP19.3■□□□□ 0.68
SMPD1-205ENST00000531303 PMPCBO75439 489 aa19.3■□□□□ 0.68
SMPD1-205ENST00000531303 IGSF6O95976 241 aa19.3■□□□□ 0.68
SMPD1-205ENST00000531303 APRTP07741 180 aa19.3■□□□□ 0.68
SMPD1-205ENST00000531303 DRD1P21728 446 aa19.3■□□□□ 0.68
SMPD1-205ENST00000531303 GKP32189 559 aa19.3■□□□□ 0.68
SMPD1-205ENST00000531303 ITGA8P53708 1063 aa19.3■□□□□ 0.68
SMPD1-205ENST00000531303 SNRPD1P62314 119 aaKnown RBP19.3■□□□□ 0.68
SMPD1-205ENST00000531303 PCSK7Q16549 785 aa19.3■□□□□ 0.68
SMPD1-205ENST00000531303 ANKRD22Q5VYY1 191 aa19.3■□□□□ 0.68
SMPD1-205ENST00000531303 SRLQ86TD4 932 aa19.3■□□□□ 0.68
SMPD1-205ENST00000531303 PDCD7Q8N8D1 485 aaKnown RBP19.3■□□□□ 0.68
SMPD1-205ENST00000531303 MYRIPQ8NFW9 859 aa19.3■□□□□ 0.68
SMPD1-205ENST00000531303 FRS2Q8WU20 508 aa19.3■□□□□ 0.68
SMPD1-205ENST00000531303 CPT1BQ92523 772 aa19.3■□□□□ 0.68
SMPD1-205ENST00000531303 IMP4Q96G21 291 aaKnown RBP19.3■□□□□ 0.68
SMPD1-205ENST00000531303 MSANTD3Q96H12 275 aa19.3■□□□□ 0.68
SMPD1-205ENST00000531303 MLPHQ9BV36 600 aaPredicted RBP19.3■□□□□ 0.68
SMPD1-205ENST00000531303 CEP44Q9C0F1 390 aa19.3■□□□□ 0.68
SMPD1-205ENST00000531303 THAP10Q9P2Z0 257 aaPredicted RBP19.3■□□□□ 0.68
SMPD1-205ENST00000531303 HECAQ9UBI9 543 aaPredicted RBP19.3■□□□□ 0.68
SMPD1-205ENST00000531303 CXorf51AA0A1B0GTR3 108 aa19.29■□□□□ 0.68
SMPD1-205ENST00000531303 TCRBV7S3A2A0A539 114 aa19.29■□□□□ 0.68
SMPD1-205ENST00000531303 GOLGA8MH3BSY2 632 aa19.29■□□□□ 0.68
SMPD1-205ENST00000531303 MAN2B1O00754 1011 aa19.29■□□□□ 0.68
SMPD1-205ENST00000531303 SEC31AO94979 1220 aaKnown RBP19.29■□□□□ 0.68
SMPD1-205ENST00000531303 PRKCHP24723 683 aa19.29■□□□□ 0.68
SMPD1-205ENST00000531303 IL12RB1P42701 662 aa19.29■□□□□ 0.68
SMPD1-205ENST00000531303 RECQLP46063 649 aaPredicted RBP19.29■□□□□ 0.68
SMPD1-205ENST00000531303 PLTPP55058 493 aa19.29■□□□□ 0.68
SMPD1-205ENST00000531303 CALCOCO2Q13137 446 aa19.29■□□□□ 0.68
SMPD1-205ENST00000531303 IHHQ14623 411 aa19.29■□□□□ 0.68
SMPD1-205ENST00000531303 ELF2Q15723 593 aa19.29■□□□□ 0.68
SMPD1-205ENST00000531303 CARD16Q5EG05 197 aa19.29■□□□□ 0.68
SMPD1-205ENST00000531303 ZNF852Q6ZMS4 543 aa19.29■□□□□ 0.68
SMPD1-205ENST00000531303 PRPF39Q86UA1 669 aaKnown RBP19.29■□□□□ 0.68
SMPD1-205ENST00000531303 IFT20Q8IY31 132 aa19.29■□□□□ 0.68
SMPD1-205ENST00000531303 CHPFQ8IZ52 775 aa19.29■□□□□ 0.68
SMPD1-205ENST00000531303 PCDH20Q8N6Y1 951 aaKnown RBP19.29■□□□□ 0.68
SMPD1-205ENST00000531303 IPMKQ8NFU5 416 aa19.29■□□□□ 0.68
SMPD1-205ENST00000531303 OR2AP1Q8NGE2 309 aa19.29■□□□□ 0.68
SMPD1-205ENST00000531303 ISG20Q96AZ6 181 aaKnown RBP19.29■□□□□ 0.68
SMPD1-205ENST00000531303 NSMCE3Q96MG7 304 aa19.29■□□□□ 0.68
SMPD1-205ENST00000531303 GDAP1L1Q96MZ0 367 aa19.29■□□□□ 0.68
SMPD1-205ENST00000531303 NUDCD1Q96RS6 583 aa19.29■□□□□ 0.68
SMPD1-205ENST00000531303 STARD13Q9Y3M8 1113 aa19.29■□□□□ 0.68
SMPD1-205ENST00000531303 MUC22E2RYF6 1773 aaPredicted RBP19.29■□□□□ 0.68
SMPD1-205ENST00000531303 TARSL2A2RTX5 802 aaKnown RBP19.28■□□□□ 0.68
SMPD1-205ENST00000531303 KRBA1A5PL33 1030 aa19.28■□□□□ 0.68
SMPD1-205ENST00000531303 ANXA9O76027 345 aa19.28■□□□□ 0.68
SMPD1-205ENST00000531303 MMP2P08253 660 aa19.28■□□□□ 0.68
SMPD1-205ENST00000531303 ITIH2P19823 946 aa19.28■□□□□ 0.68
SMPD1-205ENST00000531303 CR2P20023 1033 aa19.28■□□□□ 0.68
SMPD1-205ENST00000531303 KIR2DL1P43626 348 aaPredicted RBP19.28■□□□□ 0.68
SMPD1-205ENST00000531303 CARSP49589 748 aaKnown RBP19.28■□□□□ 0.68
SMPD1-205ENST00000531303 SKOR1P84550 965 aa19.28■□□□□ 0.68
SMPD1-205ENST00000531303 NSUN2Q08J23 767 aaKnown RBP eCLIP19.28■□□□□ 0.68
SMPD1-205ENST00000531303 OLIG2Q13516 323 aa19.28■□□□□ 0.68
SMPD1-205ENST00000531303 SEMA5AQ13591 1074 aa19.28■□□□□ 0.68
SMPD1-205ENST00000531303 HLTFQ14527 1009 aaKnown RBP eCLIP19.28■□□□□ 0.68
SMPD1-205ENST00000531303 RNASEH2BQ5TBB1 312 aaKnown RBP19.28■□□□□ 0.68
SMPD1-205ENST00000531303 DPY19L3Q6ZPD9 716 aa19.28■□□□□ 0.68
SMPD1-205ENST00000531303 PPIL6Q8IXY8 311 aa19.28■□□□□ 0.68
SMPD1-205ENST00000531303 SIX5Q8N196 739 aa19.28■□□□□ 0.68
SMPD1-205ENST00000531303 CHST14Q8NCH0 376 aa19.28■□□□□ 0.68
SMPD1-205ENST00000531303 APOL2Q9BQE5 337 aa19.28■□□□□ 0.68
SMPD1-205ENST00000531303 ZDHHC6Q9H6R6 413 aa19.28■□□□□ 0.68
SMPD1-205ENST00000531303 GDF3Q9NR23 364 aa19.28■□□□□ 0.68
SMPD1-205ENST00000531303 FAM114A2Q9NRY5 505 aa19.28■□□□□ 0.68
SMPD1-205ENST00000531303 GRHL1Q9NZI5 618 aa19.28■□□□□ 0.68
SMPD1-205ENST00000531303 WHRNQ9P202 907 aa19.28■□□□□ 0.68
SMPD1-205ENST00000531303 WNT16Q9UBV4 365 aa19.28■□□□□ 0.68
SMPD1-205ENST00000531303 STON1Q9Y6Q2 735 aa19.28■□□□□ 0.68
SMPD1-205ENST00000531303 USP12O75317 370 aa19.28■□□□□ 0.68
SMPD1-205ENST00000531303 GSRP00390 522 aa19.28■□□□□ 0.68
SMPD1-205ENST00000531303 SERPINF2P08697 491 aa19.28■□□□□ 0.68
SMPD1-205ENST00000531303 CCNHP51946 323 aaPredicted RBP19.28■□□□□ 0.68
SMPD1-205ENST00000531303 GEMP55040 296 aa19.28■□□□□ 0.68
SMPD1-205ENST00000531303 PRKCQQ04759 706 aa19.28■□□□□ 0.68
SMPD1-205ENST00000531303 MYLK3Q32MK0 819 aa19.28■□□□□ 0.68
SMPD1-205ENST00000531303 ALG1LQ6GMV1 187 aa19.28■□□□□ 0.68
SMPD1-205ENST00000531303 NCEH1Q6PIU2 408 aa19.28■□□□□ 0.68
SMPD1-205ENST00000531303 PCGF5Q86SE9 256 aa19.28■□□□□ 0.68
SMPD1-205ENST00000531303 UBALD2Q8IYN6 164 aa19.28■□□□□ 0.68
SMPD1-205ENST00000531303 BBOF1Q8ND07 529 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms