RNA–Protein interactions for RNA: ENST00000530516.1

NUP98-218, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 391 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-218ENST00000530516 RBFAQ8N0V3 343 aa3.15□□□□□ -1.91
NUP98-218ENST00000530516 CLIP4Q8N3C7 705 aa3.15□□□□□ -1.91
NUP98-218ENST00000530516 SLC35F5Q8WV83 523 aa3.15□□□□□ -1.91
NUP98-218ENST00000530516 ATOH1Q92858 354 aaPredicted RBP3.15□□□□□ -1.91
NUP98-218ENST00000530516 TMEM18Q96B42 140 aa3.15□□□□□ -1.91
NUP98-218ENST00000530516 FAM167BQ9BTA0 163 aa3.15□□□□□ -1.91
NUP98-218ENST00000530516 PAGR1Q9BTK6 254 aa3.15□□□□□ -1.91
NUP98-218ENST00000530516 SEZ6LQ9BYH1 1024 aa3.15□□□□□ -1.91
NUP98-218ENST00000530516 TM6SF1Q9BZW5 370 aa3.15□□□□□ -1.91
NUP98-218ENST00000530516 LMAN2LQ9H0V9 348 aa3.15□□□□□ -1.91
NUP98-218ENST00000530516 C6orf106Q9H6K1 298 aaPredicted RBP3.15□□□□□ -1.91
NUP98-218ENST00000530516 WDR6Q9NNW5 1121 aaKnown RBP3.15□□□□□ -1.91
NUP98-218ENST00000530516 RASSF1Q9NS23 344 aa3.15□□□□□ -1.91
NUP98-218ENST00000530516 ATP8A2Q9NTI2 1148 aa3.15□□□□□ -1.91
NUP98-218ENST00000530516 FBXO40Q9UH90 709 aa3.15□□□□□ -1.91
NUP98-218ENST00000530516 ERRFI1Q9UJM3 462 aaPredicted RBP3.15□□□□□ -1.91
NUP98-218ENST00000530516 DHDHQ9UQ10 334 aa3.15□□□□□ -1.91
NUP98-218ENST00000530516 CLDN16Q9Y5I7 305 aa3.15□□□□□ -1.91
NUP98-218ENST00000530516 COMMD10Q9Y6G5 202 aa3.15□□□□□ -1.91
NUP98-218ENST00000530516 FAM90A7PA6NKC0 464 aa3.14□□□□□ -1.91
NUP98-218ENST00000530516 FAM90A22PA8MWA6 464 aa3.14□□□□□ -1.91
NUP98-218ENST00000530516 FAM90A12PA8MX19 464 aa3.14□□□□□ -1.91
NUP98-218ENST00000530516 FAM90A23PA8MXZ1 464 aa3.14□□□□□ -1.91
NUP98-218ENST00000530516 FAM157AC9JC47 383 aa3.14□□□□□ -1.91
NUP98-218ENST00000530516 STRNO43815 780 aa3.14□□□□□ -1.91
NUP98-218ENST00000530516 PIP5K1CO60331 668 aa3.14□□□□□ -1.91
NUP98-218ENST00000530516 TCEA3O75764 348 aa3.14□□□□□ -1.91
NUP98-218ENST00000530516 PAPSS2O95340 614 aaPredicted RBP3.14□□□□□ -1.91
NUP98-218ENST00000530516 GLUD1P00367 558 aa3.14□□□□□ -1.91
NUP98-218ENST00000530516 YWHAQP27348 245 aa3.14□□□□□ -1.91
NUP98-218ENST00000530516 RFC1P35251 1148 aaPredicted RBP3.14□□□□□ -1.91
NUP98-218ENST00000530516 GLUD2P49448 558 aa3.14□□□□□ -1.91
NUP98-218ENST00000530516 KIF5AQ12840 1032 aa3.14□□□□□ -1.91
NUP98-218ENST00000530516 MYBPC2Q14324 1141 aa3.14□□□□□ -1.91
NUP98-218ENST00000530516 CTXN3Q4LDR2 81 aa3.14□□□□□ -1.91
NUP98-218ENST00000530516 TDRD12Q587J7 1177 aaKnown RBP3.14□□□□□ -1.91
NUP98-218ENST00000530516 DENND1BQ6P3S1 775 aa3.14□□□□□ -1.91
NUP98-218ENST00000530516 NR2C2APQ86WQ0 139 aa3.14□□□□□ -1.91
NUP98-218ENST00000530516 TMEM57Q8N5G2 664 aa3.14□□□□□ -1.91
NUP98-218ENST00000530516 CEP70Q8NHQ1 597 aa3.14□□□□□ -1.91
NUP98-218ENST00000530516 LMO3Q8TAP4 145 aa3.14□□□□□ -1.91
NUP98-218ENST00000530516 NCSTNQ92542 709 aa3.14□□□□□ -1.91
NUP98-218ENST00000530516 LMLNQ96KR4 655 aa3.14□□□□□ -1.91
NUP98-218ENST00000530516 NPFFR1Q9GZQ6 430 aa3.14□□□□□ -1.91
NUP98-218ENST00000530516 MVB12BQ9H7P6 319 aa3.14□□□□□ -1.91
NUP98-218ENST00000530516 CLK4Q9HAZ1 481 aaKnown RBP3.14□□□□□ -1.91
NUP98-218ENST00000530516 PCDHGB3Q9Y5G1 929 aa3.14□□□□□ -1.91
NUP98-218ENST00000530516 CKAP5Q14008 2032 aa3.14□□□□□ -1.91
NUP98-218ENST00000530516 SRRM3A6NNA2 597 aaPredicted RBP3.13□□□□□ -1.91
NUP98-218ENST00000530516 PEX14O75381 377 aa3.13□□□□□ -1.91
NUP98-218ENST00000530516 GAS8-AS1O95177 125 aa3.13□□□□□ -1.91
NUP98-218ENST00000530516 ADAP00813 363 aa3.13□□□□□ -1.91
NUP98-218ENST00000530516 SERPINC1P01008 464 aa3.13□□□□□ -1.91
NUP98-218ENST00000530516 MMP3P08254 477 aa3.13□□□□□ -1.91
NUP98-218ENST00000530516 CNPP09543 421 aaKnown RBP3.13□□□□□ -1.91
NUP98-218ENST00000530516 NAGAP17050 411 aa3.13□□□□□ -1.91
NUP98-218ENST00000530516 CTPS1P17812 591 aa3.13□□□□□ -1.91
NUP98-218ENST00000530516 AMTP48728 403 aa3.13□□□□□ -1.91
NUP98-218ENST00000530516 NUDT6P53370 316 aa3.13□□□□□ -1.91
NUP98-218ENST00000530516 CTTNQ14247 550 aaKnown RBP3.13□□□□□ -1.91
NUP98-218ENST00000530516 SLC18A3Q16572 532 aa3.13□□□□□ -1.91
NUP98-218ENST00000530516 PRAMEF19Q5SWL8 479 aa3.13□□□□□ -1.91
NUP98-218ENST00000530516 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.13□□□□□ -1.91
NUP98-218ENST00000530516 ARMC9Q7Z3E5 817 aa3.13□□□□□ -1.91
NUP98-218ENST00000530516 TMC8Q8IU68 726 aa3.13□□□□□ -1.91
NUP98-218ENST00000530516 MIGA1Q8NAN2 632 aa3.13□□□□□ -1.91
NUP98-218ENST00000530516 GFM1Q96RP9 751 aaKnown RBP3.13□□□□□ -1.91
NUP98-218ENST00000530516 TWNKQ96RR1 684 aa3.13□□□□□ -1.91
NUP98-218ENST00000530516 NPLQ9BXD5 320 aaPredicted RBP3.13□□□□□ -1.91
NUP98-218ENST00000530516 STN1Q9H668 368 aaKnown RBP3.13□□□□□ -1.91
NUP98-218ENST00000530516 GPR52Q9Y2T5 361 aa3.13□□□□□ -1.91
NUP98-218ENST00000530516 IGLV5-52A0A0A0MRZ9 124 aa3.12□□□□□ -1.91
NUP98-218ENST00000530516 IGHV4-28A0A0C4DH34 117 aa3.12□□□□□ -1.91
NUP98-218ENST00000530516 VWA3AA6NCI4 1184 aa3.12□□□□□ -1.91
NUP98-218ENST00000530516 EYA2O00167 538 aa3.12□□□□□ -1.91
NUP98-218ENST00000530516 HBP1O60381 514 aa3.12□□□□□ -1.91
NUP98-218ENST00000530516 LDB3O75112 727 aa3.12□□□□□ -1.91
NUP98-218ENST00000530516 CKMT1AP12532 417 aa3.12□□□□□ -1.91
NUP98-218ENST00000530516 TNNT1P13805 278 aa3.12□□□□□ -1.91
NUP98-218ENST00000530516 TTKP33981 857 aa3.12□□□□□ -1.91
NUP98-218ENST00000530516 CENPAP49450 140 aa3.12□□□□□ -1.91
NUP98-218ENST00000530516 CXCR3P49682 368 aa3.12□□□□□ -1.91
NUP98-218ENST00000530516 MXI1P50539 228 aa3.12□□□□□ -1.91
NUP98-218ENST00000530516 ART1P52961 327 aa3.12□□□□□ -1.91
NUP98-218ENST00000530516 ARSFP54793 590 aa3.12□□□□□ -1.91
NUP98-218ENST00000530516 ARL4CP56559 192 aa3.12□□□□□ -1.91
NUP98-218ENST00000530516 ADORA2A-AS1P86434 159 aa3.12□□□□□ -1.91
NUP98-218ENST00000530516 POU3F1Q03052 451 aaPredicted RBP3.12□□□□□ -1.91
NUP98-218ENST00000530516 DSC1Q08554 894 aa3.12□□□□□ -1.91
NUP98-218ENST00000530516 FAM27E3Q08E93 113 aa3.12□□□□□ -1.91
NUP98-218ENST00000530516 GRSF1Q12849 480 aaKnown RBP eCLIP3.12□□□□□ -1.91
NUP98-218ENST00000530516 OS9Q13438 667 aaPredicted RBP3.12□□□□□ -1.91
NUP98-218ENST00000530516 GRAMD1BQ3KR37 738 aa3.12□□□□□ -1.91
NUP98-218ENST00000530516 ADCK5Q3MIX3 580 aa3.12□□□□□ -1.91
NUP98-218ENST00000530516 C9orf57Q5W0N0 161 aa3.12□□□□□ -1.91
NUP98-218ENST00000530516 PRSS57Q6UWY2 283 aa3.12□□□□□ -1.91
NUP98-218ENST00000530516 MON1BQ7L1V2 547 aa3.12□□□□□ -1.91
NUP98-218ENST00000530516 C2CD5Q86YS7 1000 aa3.12□□□□□ -1.91
NUP98-218ENST00000530516 ANKRD44Q8N8A2 993 aa3.12□□□□□ -1.91
NUP98-218ENST00000530516 MCPH1Q8NEM0 835 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms