RNA–Protein interactions for RNA: ENST00000530378.5

SOX6-213, Transcript of SRY-box 6, humanhuman

TSL 2

Gene SOX6, Length 1,818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-213ENST00000530378 POLR1EQ9GZS1 481 aaKnown RBP10.81□□□□□ -0.68
SOX6-213ENST00000530378 NOD2Q9HC29 1040 aa10.81□□□□□ -0.68
SOX6-213ENST00000530378 CD320Q9NPF0 282 aa10.81□□□□□ -0.68
SOX6-213ENST00000530378 GRHL1Q9NZI5 618 aa10.81□□□□□ -0.68
SOX6-213ENST00000530378 EVLQ9UI08 416 aaPredicted RBP10.81□□□□□ -0.68
SOX6-213ENST00000530378 MUTYHQ9UIF7 546 aa10.81□□□□□ -0.68
SOX6-213ENST00000530378 HCN2Q9UL51 889 aa10.81□□□□□ -0.68
SOX6-213ENST00000530378 NFU1Q9UMS0 254 aa10.81□□□□□ -0.68
SOX6-213ENST00000530378 DUSP12Q9UNI6 340 aa10.81□□□□□ -0.68
SOX6-213ENST00000530378 TTC28Q96AY4 2481 aa10.8□□□□□ -0.68
SOX6-213ENST00000530378 BANF1O75531 89 aa10.8□□□□□ -0.68
SOX6-213ENST00000530378 ZNF821O75541 412 aaPredicted RBP10.8□□□□□ -0.68
SOX6-213ENST00000530378 PIGNO95427 931 aa10.8□□□□□ -0.68
SOX6-213ENST00000530378 ATP5BP06576 529 aaKnown RBP10.8□□□□□ -0.68
SOX6-213ENST00000530378 TIE1P35590 1138 aa10.8□□□□□ -0.68
SOX6-213ENST00000530378 GRIA1P42261 906 aa10.8□□□□□ -0.68
SOX6-213ENST00000530378 SULT2A1Q06520 285 aa10.8□□□□□ -0.68
SOX6-213ENST00000530378 ZNF234Q14588 700 aa10.8□□□□□ -0.68
SOX6-213ENST00000530378 SLC44A4Q53GD3 710 aa10.8□□□□□ -0.68
SOX6-213ENST00000530378 FSTL4Q6MZW2 842 aa10.8□□□□□ -0.68
SOX6-213ENST00000530378 BBS5Q8N3I7 341 aa10.8□□□□□ -0.68
SOX6-213ENST00000530378 CHST14Q8NCH0 376 aa10.8□□□□□ -0.68
SOX6-213ENST00000530378 LRRC45Q96CN5 670 aa10.8□□□□□ -0.68
SOX6-213ENST00000530378 ASB2Q96Q27 587 aa10.8□□□□□ -0.68
SOX6-213ENST00000530378 PSKH2Q96QS6 385 aa10.8□□□□□ -0.68
SOX6-213ENST00000530378 VAT1Q99536 393 aa10.8□□□□□ -0.68
SOX6-213ENST00000530378 MGME1Q9BQP7 344 aa10.8□□□□□ -0.68
SOX6-213ENST00000530378 ZDHHC6Q9H6R6 413 aa10.8□□□□□ -0.68
SOX6-213ENST00000530378 SCUBE2Q9NQ36 999 aa10.8□□□□□ -0.68
SOX6-213ENST00000530378 PRKAG3Q9UGI9 489 aa10.8□□□□□ -0.68
SOX6-213ENST00000530378 ANAPC5Q9UJX4 755 aa10.8□□□□□ -0.68
SOX6-213ENST00000530378 FBXL21Q9UKT6 434 aa10.8□□□□□ -0.68
SOX6-213ENST00000530378 TRHDEQ9UKU6 1024 aa10.8□□□□□ -0.68
SOX6-213ENST00000530378 TPX2Q9ULW0 747 aaKnown RBP10.8□□□□□ -0.68
SOX6-213ENST00000530378 SORCS3Q9UPU3 1222 aa10.8□□□□□ -0.68
SOX6-213ENST00000530378 HS3ST2Q9Y278 367 aa10.8□□□□□ -0.68
SOX6-213ENST00000530378 ATP8A1Q9Y2Q0 1164 aa10.8□□□□□ -0.68
SOX6-213ENST00000530378 K7EQS6 105 aa10.79□□□□□ -0.68
SOX6-213ENST00000530378 TNFRSF10AO00220 468 aa10.79□□□□□ -0.68
SOX6-213ENST00000530378 MMP2P08253 660 aa10.79□□□□□ -0.68
SOX6-213ENST00000530378 PRKCHP24723 683 aa10.79□□□□□ -0.68
SOX6-213ENST00000530378 IL12RB1P42701 662 aa10.79□□□□□ -0.68
SOX6-213ENST00000530378 GEMIN4P57678 1058 aaKnown RBP10.79□□□□□ -0.68
SOX6-213ENST00000530378 ST8SIA6P61647 398 aa10.79□□□□□ -0.68
SOX6-213ENST00000530378 PFKPQ01813 784 aa10.79□□□□□ -0.68
SOX6-213ENST00000530378 CALCOCO2Q13137 446 aa10.79□□□□□ -0.68
SOX6-213ENST00000530378 KCNJ11Q14654 390 aa10.79□□□□□ -0.68
SOX6-213ENST00000530378 RFTN1Q14699 578 aaPredicted RBP10.79□□□□□ -0.68
SOX6-213ENST00000530378 MLF2Q15773 248 aaPredicted RBP10.79□□□□□ -0.68
SOX6-213ENST00000530378 POM121L1PQ3SYA9 428 aa10.79□□□□□ -0.68
SOX6-213ENST00000530378 HP1BP3Q5SSJ5 553 aaPredicted RBP10.79□□□□□ -0.68
SOX6-213ENST00000530378 RNASEH2BQ5TBB1 312 aaKnown RBP10.79□□□□□ -0.68
SOX6-213ENST00000530378 ZDHHC24Q6UX98 284 aa10.79□□□□□ -0.68
SOX6-213ENST00000530378 SERPINA13PQ6UXR4 307 aa10.79□□□□□ -0.68
SOX6-213ENST00000530378 PRPF39Q86UA1 669 aaKnown RBP10.79□□□□□ -0.68
SOX6-213ENST00000530378 CCDC25Q86WR0 208 aa10.79□□□□□ -0.68
SOX6-213ENST00000530378 RALGPS2Q86X27 583 aaPredicted RBP10.79□□□□□ -0.68
SOX6-213ENST00000530378 IFT20Q8IY31 132 aa10.79□□□□□ -0.68
SOX6-213ENST00000530378 ZNF513Q8N8E2 541 aaPredicted RBP10.79□□□□□ -0.68
SOX6-213ENST00000530378 ARRDC2Q8TBH0 407 aa10.79□□□□□ -0.68
SOX6-213ENST00000530378 FBXO25Q8TCJ0 367 aa10.79□□□□□ -0.68
SOX6-213ENST00000530378 CCHCR1Q8TD31 782 aa10.79□□□□□ -0.68
SOX6-213ENST00000530378 PDCD6IPQ8WUM4 868 aaKnown RBP10.79□□□□□ -0.68
SOX6-213ENST00000530378 PRCCQ92733 491 aaPredicted RBP10.79□□□□□ -0.68
SOX6-213ENST00000530378 GDAP1L1Q96MZ0 367 aa10.79□□□□□ -0.68
SOX6-213ENST00000530378 FICDQ9BVA6 458 aa10.79□□□□□ -0.68
SOX6-213ENST00000530378 PARD6BQ9BYG5 372 aa10.79□□□□□ -0.68
SOX6-213ENST00000530378 GDF3Q9NR23 364 aa10.79□□□□□ -0.68
SOX6-213ENST00000530378 ARHGEF3Q9NR81 526 aa10.79□□□□□ -0.68
SOX6-213ENST00000530378 SLC2A4RGQ9NR83 387 aa10.79□□□□□ -0.68
SOX6-213ENST00000530378 POLR3BQ9NW08 1133 aaPredicted RBP10.79□□□□□ -0.68
SOX6-213ENST00000530378 PLA2G4CQ9UP65 541 aa10.79□□□□□ -0.68
SOX6-213ENST00000530378 CKAP5Q14008 2032 aa10.79□□□□□ -0.68
SOX6-213ENST00000530378 SHISA7A6NL88 538 aa10.79□□□□□ -0.68
SOX6-213ENST00000530378 TP73O15350 636 aa10.79□□□□□ -0.68
SOX6-213ENST00000530378 AVILO75366 819 aa10.79□□□□□ -0.68
SOX6-213ENST00000530378 IGSF6O95976 241 aa10.79□□□□□ -0.68
SOX6-213ENST00000530378 ASLP04424 464 aa10.79□□□□□ -0.68
SOX6-213ENST00000530378 ECHS1P30084 290 aa10.79□□□□□ -0.68
SOX6-213ENST00000530378 FDFT1P37268 417 aa10.79□□□□□ -0.68
SOX6-213ENST00000530378 EIF2DP41214 584 aaKnown RBP10.79□□□□□ -0.68
SOX6-213ENST00000530378 CHRNA4P43681 627 aa10.79□□□□□ -0.68
SOX6-213ENST00000530378 SEMA5AQ13591 1074 aa10.79□□□□□ -0.68
SOX6-213ENST00000530378 GALNT3Q14435 633 aa10.79□□□□□ -0.68
SOX6-213ENST00000530378 PARP6Q2NL67 630 aa10.79□□□□□ -0.68
SOX6-213ENST00000530378 INO80DQ53TQ3 878 aaPredicted RBP10.79□□□□□ -0.68
SOX6-213ENST00000530378 DENND2CQ68D51 928 aa10.79□□□□□ -0.68
SOX6-213ENST00000530378 PPIL6Q8IXY8 311 aa10.79□□□□□ -0.68
SOX6-213ENST00000530378 CHPFQ8IZ52 775 aa10.79□□□□□ -0.68
SOX6-213ENST00000530378 SLC25A41Q8N5S1 370 aa10.79□□□□□ -0.68
SOX6-213ENST00000530378 PAF1Q8N7H5 531 aa10.79□□□□□ -0.68
SOX6-213ENST00000530378 FAM3CQ92520 227 aa10.79□□□□□ -0.68
SOX6-213ENST00000530378 FATE1Q969F0 183 aa10.79□□□□□ -0.68
SOX6-213ENST00000530378 IMP4Q96G21 291 aaKnown RBP10.79□□□□□ -0.68
SOX6-213ENST00000530378 SMIM14Q96QK8 99 aa10.79□□□□□ -0.68
SOX6-213ENST00000530378 SLC25A51Q9H1U9 297 aa10.79□□□□□ -0.68
SOX6-213ENST00000530378 C8orf33Q9H7E9 229 aaPredicted RBP10.79□□□□□ -0.68
SOX6-213ENST00000530378 HECAQ9UBI9 543 aaPredicted RBP10.79□□□□□ -0.68
SOX6-213ENST00000530378 PCDHGC4Q9Y5F7 938 aa10.79□□□□□ -0.68
SOX6-213ENST00000530378 TARSL2A2RTX5 802 aaKnown RBP10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms