RNA–Protein interactions for RNA: ENST00000530008.1

CAPRIN1-208, Transcript of cell cycle associated protein 1, humanhuman

TSL 4

Gene CAPRIN1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-208ENST00000530008 ZFPM2Q8WW38 1151 aa6.72□□□□□ -1.33
CAPRIN1-208ENST00000530008 NEU4Q8WWR8 484 aaPredicted RBP6.72□□□□□ -1.33
CAPRIN1-208ENST00000530008 ZNF764Q96H86 408 aaPredicted RBP6.72□□□□□ -1.33
CAPRIN1-208ENST00000530008 COQ10AQ96MF6 247 aa6.72□□□□□ -1.33
CAPRIN1-208ENST00000530008 CDK5RAP1Q96SZ6 601 aaKnown RBP6.72□□□□□ -1.33
CAPRIN1-208ENST00000530008 APOL6Q9BWW8 343 aa6.72□□□□□ -1.33
CAPRIN1-208ENST00000530008 RABEP2Q9H5N1 569 aa6.72□□□□□ -1.33
CAPRIN1-208ENST00000530008 ASAH2Q9NR71 780 aa6.72□□□□□ -1.33
CAPRIN1-208ENST00000530008 SLC6A13Q9NSD5 602 aa6.72□□□□□ -1.33
CAPRIN1-208ENST00000530008 SYBUQ9NX95 663 aa6.72□□□□□ -1.33
CAPRIN1-208ENST00000530008 FBXL17Q9UF56 701 aa6.72□□□□□ -1.33
CAPRIN1-208ENST00000530008 ADGRF5Q8IZF2 1346 aa6.72□□□□□ -1.33
CAPRIN1-208ENST00000530008 A0A0A0MQY5 61 aa6.71□□□□□ -1.34
CAPRIN1-208ENST00000530008 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.71□□□□□ -1.34
CAPRIN1-208ENST00000530008 CBY3A6NI87 242 aa6.71□□□□□ -1.34
CAPRIN1-208ENST00000530008 CDRT15L2A8MXV6 281 aa6.71□□□□□ -1.34
CAPRIN1-208ENST00000530008 SCAMP1O15126 338 aa6.71□□□□□ -1.34
CAPRIN1-208ENST00000530008 ESRRBO95718 433 aa6.71□□□□□ -1.34
CAPRIN1-208ENST00000530008 TUBBP07437 444 aa6.71□□□□□ -1.34
CAPRIN1-208ENST00000530008 KRT10P13645 584 aa6.71□□□□□ -1.34
CAPRIN1-208ENST00000530008 TNFRSF1AP19438 455 aa6.71□□□□□ -1.34
CAPRIN1-208ENST00000530008 TBXAS1P24557 533 aaPredicted RBP6.71□□□□□ -1.34
CAPRIN1-208ENST00000530008 CDAP32320 146 aa6.71□□□□□ -1.34
CAPRIN1-208ENST00000530008 ADRA1BP35368 520 aa6.71□□□□□ -1.34
CAPRIN1-208ENST00000530008 SLC15A1P46059 708 aa6.71□□□□□ -1.34
CAPRIN1-208ENST00000530008 PPP5CP53041 499 aa6.71□□□□□ -1.34
CAPRIN1-208ENST00000530008 F2RL1P55085 397 aa6.71□□□□□ -1.34
CAPRIN1-208ENST00000530008 RRP1P56182 461 aaKnown RBP6.71□□□□□ -1.34
CAPRIN1-208ENST00000530008 UBXN2AP68543 259 aa6.71□□□□□ -1.34
CAPRIN1-208ENST00000530008 KRT83P78385 493 aa6.71□□□□□ -1.34
CAPRIN1-208ENST00000530008 TNFAIP1Q13829 316 aa6.71□□□□□ -1.34
CAPRIN1-208ENST00000530008 HIST2H2ACQ16777 129 aaPredicted RBP6.71□□□□□ -1.34
CAPRIN1-208ENST00000530008 ASTE1Q2TB18 679 aaPredicted RBP6.71□□□□□ -1.34
CAPRIN1-208ENST00000530008 KIAA0930Q6ICG6 404 aaPredicted RBP6.71□□□□□ -1.34
CAPRIN1-208ENST00000530008 JADE1Q6IE81 842 aa6.71□□□□□ -1.34
CAPRIN1-208ENST00000530008 DENND5BQ6ZUT9 1274 aa6.71□□□□□ -1.34
CAPRIN1-208ENST00000530008 GALNT13Q8IUC8 556 aa6.71□□□□□ -1.34
CAPRIN1-208ENST00000530008 UEVLDQ8IX04 471 aa6.71□□□□□ -1.34
CAPRIN1-208ENST00000530008 TMEM170AQ8WVE7 144 aa6.71□□□□□ -1.34
CAPRIN1-208ENST00000530008 FAR1Q8WVX9 515 aa6.71□□□□□ -1.34
CAPRIN1-208ENST00000530008 ATP6V1E2Q96A05 226 aa6.71□□□□□ -1.34
CAPRIN1-208ENST00000530008 SAT2Q96F10 170 aaPredicted RBP6.71□□□□□ -1.34
CAPRIN1-208ENST00000530008 PDLIM2Q96JY6 352 aa6.71□□□□□ -1.34
CAPRIN1-208ENST00000530008 SPATA17Q96L03 361 aa6.71□□□□□ -1.34
CAPRIN1-208ENST00000530008 BBC3Q96PG8 261 aaPredicted RBP6.71□□□□□ -1.34
CAPRIN1-208ENST00000530008 ABHD1Q96SE0 405 aa6.71□□□□□ -1.34
CAPRIN1-208ENST00000530008 NCAPGQ9BPX3 1015 aa6.71□□□□□ -1.34
CAPRIN1-208ENST00000530008 SLC35C2Q9NQQ7 365 aa6.71□□□□□ -1.34
CAPRIN1-208ENST00000530008 TAB2Q9NYJ8 693 aa6.71□□□□□ -1.34
CAPRIN1-208ENST00000530008 PLK2Q9NYY3 685 aa6.71□□□□□ -1.34
CAPRIN1-208ENST00000530008 MARCH4Q9P2E8 410 aaPredicted RBP6.71□□□□□ -1.34
CAPRIN1-208ENST00000530008 ZNF112Q9UJU3 913 aa6.71□□□□□ -1.34
CAPRIN1-208ENST00000530008 NENFQ9UMX5 172 aa6.71□□□□□ -1.34
CAPRIN1-208ENST00000530008 SALL3Q9BXA9 1300 aa6.71□□□□□ -1.34
CAPRIN1-208ENST00000530008 A0A0G2JLL6 359 aaPredicted RBP6.7□□□□□ -1.34
CAPRIN1-208ENST00000530008 CXorf65A6NEN9 183 aa6.7□□□□□ -1.34
CAPRIN1-208ENST00000530008 FAM90A8PA6NJQ4 464 aa6.7□□□□□ -1.34
CAPRIN1-208ENST00000530008 GLOD5A6NK44 160 aa6.7□□□□□ -1.34
CAPRIN1-208ENST00000530008 MSI1O43347 362 aaKnown RBP6.7□□□□□ -1.34
CAPRIN1-208ENST00000530008 TFP02787 698 aa6.7□□□□□ -1.34
CAPRIN1-208ENST00000530008 FAM90A13PP0C7W8 464 aa6.7□□□□□ -1.34
CAPRIN1-208ENST00000530008 FAM90A24PP0C7X0 464 aa6.7□□□□□ -1.34
CAPRIN1-208ENST00000530008 MCCP23508 829 aa6.7□□□□□ -1.34
CAPRIN1-208ENST00000530008 AVPR1BP47901 424 aa6.7□□□□□ -1.34
CAPRIN1-208ENST00000530008 LMAN1P49257 510 aa6.7□□□□□ -1.34
CAPRIN1-208ENST00000530008 HDAC4P56524 1084 aa6.7□□□□□ -1.34
CAPRIN1-208ENST00000530008 DGCR2P98153 550 aa6.7□□□□□ -1.34
CAPRIN1-208ENST00000530008 OLIG2Q13516 323 aa6.7□□□□□ -1.34
CAPRIN1-208ENST00000530008 TUBA3CQ13748 450 aa6.7□□□□□ -1.34
CAPRIN1-208ENST00000530008 FGFBP1Q14512 234 aa6.7□□□□□ -1.34
CAPRIN1-208ENST00000530008 CDSNQ15517 529 aa6.7□□□□□ -1.34
CAPRIN1-208ENST00000530008 FAM153CQ494X1 144 aa6.7□□□□□ -1.34
CAPRIN1-208ENST00000530008 TBC1D9BQ66K14 1250 aa6.7□□□□□ -1.34
CAPRIN1-208ENST00000530008 CEP85Q6P2H3 762 aa6.7□□□□□ -1.34
CAPRIN1-208ENST00000530008 TUBA3EQ6PEY2 450 aa6.7□□□□□ -1.34
CAPRIN1-208ENST00000530008 GLDNQ6ZMI3 551 aaPredicted RBP6.7□□□□□ -1.34
CAPRIN1-208ENST00000530008 DNAAF5Q86Y56 855 aa6.7□□□□□ -1.34
CAPRIN1-208ENST00000530008 TTC30BQ8N4P2 665 aa6.7□□□□□ -1.34
CAPRIN1-208ENST00000530008 FAM47BQ8NA70 645 aa6.7□□□□□ -1.34
CAPRIN1-208ENST00000530008 POMGNT2Q8NAT1 580 aa6.7□□□□□ -1.34
CAPRIN1-208ENST00000530008 AVL9Q8NBF6 648 aa6.7□□□□□ -1.34
CAPRIN1-208ENST00000530008 PRPF31Q8WWY3 499 aaKnown RBP6.7□□□□□ -1.34
CAPRIN1-208ENST00000530008 DVL3Q92997 716 aaPredicted RBP6.7□□□□□ -1.34
CAPRIN1-208ENST00000530008 PABPC5Q96DU9 382 aaKnown RBP6.7□□□□□ -1.34
CAPRIN1-208ENST00000530008 GCNAQ96QF7 691 aa6.7□□□□□ -1.34
CAPRIN1-208ENST00000530008 ADPGKQ9BRR6 497 aa6.7□□□□□ -1.34
CAPRIN1-208ENST00000530008 NUF2Q9BZD4 464 aa6.7□□□□□ -1.34
CAPRIN1-208ENST00000530008 KLHL4Q9C0H6 718 aa6.7□□□□□ -1.34
CAPRIN1-208ENST00000530008 KIF9Q9HAQ2 790 aa6.7□□□□□ -1.34
CAPRIN1-208ENST00000530008 SMPD4Q9NXE4 827 aa6.7□□□□□ -1.34
CAPRIN1-208ENST00000530008 FOXJ2Q9P0K8 574 aa6.7□□□□□ -1.34
CAPRIN1-208ENST00000530008 CPSF2Q9P2I0 782 aaKnown RBP6.7□□□□□ -1.34
CAPRIN1-208ENST00000530008 CNOT11Q9UKZ1 510 aaKnown RBP6.7□□□□□ -1.34
CAPRIN1-208ENST00000530008 NPIPB11E5RHQ5 1161 aa6.69□□□□□ -1.34
CAPRIN1-208ENST00000530008 TBX10O75333 385 aa6.69□□□□□ -1.34
CAPRIN1-208ENST00000530008 CHRNA5P30532 468 aa6.69□□□□□ -1.34
CAPRIN1-208ENST00000530008 MFAP4P55083 255 aa6.69□□□□□ -1.34
CAPRIN1-208ENST00000530008 PLP2Q04941 152 aa6.69□□□□□ -1.34
CAPRIN1-208ENST00000530008 GALNT3Q14435 633 aa6.69□□□□□ -1.34
CAPRIN1-208ENST00000530008 CPLX2Q6PUV4 134 aaKnown RBP6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms