RNA–Protein interactions for RNA: ENST00000528362.1

PSMC3-205, Transcript of proteasome 26S subunit, ATPase 3, human

TSL 2

Gene PSMC3, Length 546 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC3-205	ENST00000528362	GDAP1L1	Q96MZ0	367 aa		11.95	□□□□□ -0.5
PSMC3-205	ENST00000528362	SLC39A8	Q9C0K1	460 aa		11.95	□□□□□ -0.5
PSMC3-205	ENST00000528362	DONSON	Q9NYP3	566 aa		11.95	□□□□□ -0.5
PSMC3-205	ENST00000528362	CWC15	Q9P013	229 aa	Known RBP	11.95	□□□□□ -0.5
PSMC3-205	ENST00000528362	LHX3	Q9UBR4	397 aa		11.95	□□□□□ -0.5
PSMC3-205	ENST00000528362	ANAPC7	Q9UJX3	599 aa		11.95	□□□□□ -0.5
PSMC3-205	ENST00000528362	ZFR2	Q9UPR6	939 aa	Known RBP	11.95	□□□□□ -0.5
PSMC3-205	ENST00000528362	DMTF1	Q9Y222	760 aa		11.95	□□□□□ -0.5
PSMC3-205	ENST00000528362	ACACB	O00763	2458 aa		11.95	□□□□□ -0.5
PSMC3-205	ENST00000528362	ASCC3	Q8N3C0	2202 aa	Known RBP	11.94	□□□□□ -0.5
PSMC3-205	ENST00000528362		A0A1W2PQU0	124 aa		11.94	□□□□□ -0.5
PSMC3-205	ENST00000528362		J3KR12	359 aa		11.94	□□□□□ -0.5
PSMC3-205	ENST00000528362	DAPK3	O43293	454 aa		11.94	□□□□□ -0.5
PSMC3-205	ENST00000528362	PRAMEF11	O60813	436 aa		11.94	□□□□□ -0.5
PSMC3-205	ENST00000528362	CBFA2T3	O75081	653 aa		11.94	□□□□□ -0.5
PSMC3-205	ENST00000528362	MFAP3L	O75121	409 aa		11.94	□□□□□ -0.5
PSMC3-205	ENST00000528362	POP4	O95707	220 aa	Known RBP	11.94	□□□□□ -0.5
PSMC3-205	ENST00000528362	UGT2B4	P06133	528 aa		11.94	□□□□□ -0.5
PSMC3-205	ENST00000528362	PRLR	P16471	622 aa		11.94	□□□□□ -0.5
PSMC3-205	ENST00000528362	CD38	P28907	300 aa		11.94	□□□□□ -0.5
PSMC3-205	ENST00000528362	HCAR3	P49019	387 aa		11.94	□□□□□ -0.5
PSMC3-205	ENST00000528362	CCT8	P50990	548 aa		11.94	□□□□□ -0.5
PSMC3-205	ENST00000528362	PAPOLA	P51003	745 aa	Known RBP	11.94	□□□□□ -0.5
PSMC3-205	ENST00000528362	ZNF135	P52742	658 aa	Predicted RBP	11.94	□□□□□ -0.5
PSMC3-205	ENST00000528362	NXPH1	P58417	271 aa		11.94	□□□□□ -0.5
PSMC3-205	ENST00000528362	RHOA	P61586	193 aa		11.94	□□□□□ -0.5
PSMC3-205	ENST00000528362	SNRPD1	P62314	119 aa	Known RBP	11.94	□□□□□ -0.5
PSMC3-205	ENST00000528362	SIM1	P81133	766 aa	Predicted RBP	11.94	□□□□□ -0.5
PSMC3-205	ENST00000528362	SHC2	P98077	582 aa		11.94	□□□□□ -0.5
PSMC3-205	ENST00000528362	SLC25A11	Q02978	314 aa	Known RBP	11.94	□□□□□ -0.5
PSMC3-205	ENST00000528362	MAPK8IP2	Q13387	824 aa	Predicted RBP	11.94	□□□□□ -0.5
PSMC3-205	ENST00000528362	CYTH1	Q15438	398 aa		11.94	□□□□□ -0.5
PSMC3-205	ENST00000528362	SLC18A3	Q16572	532 aa		11.94	□□□□□ -0.5
PSMC3-205	ENST00000528362	TMEM259	Q4ZIN3	620 aa		11.94	□□□□□ -0.5
PSMC3-205	ENST00000528362	ZNF805	Q5CZA5	627 aa		11.94	□□□□□ -0.5
PSMC3-205	ENST00000528362	SEL1L3	Q68CR1	1132 aa		11.94	□□□□□ -0.5
PSMC3-205	ENST00000528362	NEK5	Q6P3R8	708 aa		11.94	□□□□□ -0.5
PSMC3-205	ENST00000528362	DBX2	Q6ZNG2	339 aa		11.94	□□□□□ -0.5
PSMC3-205	ENST00000528362	TMEM145	Q8NBT3	493 aa		11.94	□□□□□ -0.5
PSMC3-205	ENST00000528362	HSPH1	Q92598	858 aa		11.94	□□□□□ -0.5
PSMC3-205	ENST00000528362	KLK6	Q92876	244 aa		11.94	□□□□□ -0.5
PSMC3-205	ENST00000528362	LRIG1	Q96JA1	1093 aa		11.94	□□□□□ -0.5
PSMC3-205	ENST00000528362	CNTNAP3B	Q96NU0	1288 aa		11.94	□□□□□ -0.5
PSMC3-205	ENST00000528362	PACSIN1	Q9BY11	444 aa		11.94	□□□□□ -0.5
PSMC3-205	ENST00000528362	CNTNAP3	Q9BZ76	1288 aa		11.94	□□□□□ -0.5
PSMC3-205	ENST00000528362	ZWILCH	Q9H900	591 aa		11.94	□□□□□ -0.5
PSMC3-205	ENST00000528362	STAU2	Q9NUL3	570 aa	Known RBP eCLIP	11.94	□□□□□ -0.5
PSMC3-205	ENST00000528362	UBA2	Q9UBT2	640 aa	Predicted RBP	11.94	□□□□□ -0.5
PSMC3-205	ENST00000528362	IP6K2	Q9UHH9	426 aa		11.94	□□□□□ -0.5
PSMC3-205	ENST00000528362	PCOLCE2	Q9UKZ9	415 aa		11.94	□□□□□ -0.5
PSMC3-205	ENST00000528362	WASF3	Q9UPY6	502 aa		11.94	□□□□□ -0.5
PSMC3-205	ENST00000528362	CA5B	Q9Y2D0	317 aa		11.94	□□□□□ -0.5
PSMC3-205	ENST00000528362	MFHAS1	Q9Y4C4	1052 aa		11.94	□□□□□ -0.5
PSMC3-205	ENST00000528362	PCDHGB2	Q9Y5G2	931 aa		11.94	□□□□□ -0.5
PSMC3-205	ENST00000528362	FADS3	Q9Y5Q0	445 aa		11.94	□□□□□ -0.5
PSMC3-205	ENST00000528362	SSU72P8	A0A1W2PR75	194 aa		11.93	□□□□□ -0.5
PSMC3-205	ENST00000528362	ARHGAP42	A6NI28	874 aa		11.93	□□□□□ -0.5
PSMC3-205	ENST00000528362	C16orf96	A6NNT2	1141 aa		11.93	□□□□□ -0.5
PSMC3-205	ENST00000528362	PRAMEF26	H0Y7S4	382 aa		11.93	□□□□□ -0.5
PSMC3-205	ENST00000528362		H3BRJ5	948 aa		11.93	□□□□□ -0.5
PSMC3-205	ENST00000528362	TLR4	O00206	839 aa		11.93	□□□□□ -0.5
PSMC3-205	ENST00000528362	SLC31A1	O15431	190 aa		11.93	□□□□□ -0.5
PSMC3-205	ENST00000528362	INSIG1	O15503	277 aa		11.93	□□□□□ -0.5
PSMC3-205	ENST00000528362	SPINT1	O43278	529 aa		11.93	□□□□□ -0.5
PSMC3-205	ENST00000528362	AP1G1	O43747	822 aa		11.93	□□□□□ -0.5
PSMC3-205	ENST00000528362	PCDHGA12	O60330	932 aa		11.93	□□□□□ -0.5
PSMC3-205	ENST00000528362	PCDH8	O95206	1070 aa		11.93	□□□□□ -0.5
PSMC3-205	ENST00000528362	IGSF6	O95976	241 aa		11.93	□□□□□ -0.5
PSMC3-205	ENST00000528362	RARA	P10276	462 aa		11.93	□□□□□ -0.5
PSMC3-205	ENST00000528362	ABL2	P42684	1182 aa		11.93	□□□□□ -0.5
PSMC3-205	ENST00000528362	IL9R	Q01113	521 aa		11.93	□□□□□ -0.5
PSMC3-205	ENST00000528362	HNRNPD	Q14103	355 aa	Known RBP	11.93	□□□□□ -0.5
PSMC3-205	ENST00000528362	FGL2	Q14314	439 aa		11.93	□□□□□ -0.5
PSMC3-205	ENST00000528362	SHB	Q15464	509 aa		11.93	□□□□□ -0.5
PSMC3-205	ENST00000528362	SETMAR	Q53H47	684 aa	Predicted RBP	11.93	□□□□□ -0.5
PSMC3-205	ENST00000528362	BOLA3	Q53S33	107 aa		11.93	□□□□□ -0.5
PSMC3-205	ENST00000528362	PRAMEF14	Q5SWL7	426 aa		11.93	□□□□□ -0.5
PSMC3-205	ENST00000528362	FBXL19	Q6PCT2	694 aa		11.93	□□□□□ -0.5
PSMC3-205	ENST00000528362	ARHGAP36	Q6ZRI8	547 aa		11.93	□□□□□ -0.5
PSMC3-205	ENST00000528362	POLN	Q7Z5Q5	900 aa		11.93	□□□□□ -0.5
PSMC3-205	ENST00000528362	SPATS2	Q86XZ4	545 aa	Known RBP	11.93	□□□□□ -0.5
PSMC3-205	ENST00000528362	CPNE8	Q86YQ8	564 aa		11.93	□□□□□ -0.5
PSMC3-205	ENST00000528362	TP53INP2	Q8IXH6	220 aa		11.93	□□□□□ -0.5
PSMC3-205	ENST00000528362	MFSD2A	Q8NA29	543 aa		11.93	□□□□□ -0.5
PSMC3-205	ENST00000528362	ZNF564	Q8TBZ8	553 aa	Predicted RBP	11.93	□□□□□ -0.5
PSMC3-205	ENST00000528362	TEKT4	Q8WW24	435 aa		11.93	□□□□□ -0.5
PSMC3-205	ENST00000528362	SKA1	Q96BD8	255 aa		11.93	□□□□□ -0.5
PSMC3-205	ENST00000528362	EXOC2	Q96KP1	924 aa		11.93	□□□□□ -0.5
PSMC3-205	ENST00000528362	CSPG4P5	Q96PW8	444 aa		11.93	□□□□□ -0.5
PSMC3-205	ENST00000528362	ELF4	Q99607	663 aa	Predicted RBP	11.93	□□□□□ -0.5
PSMC3-205	ENST00000528362	MYOC	Q99972	504 aa		11.93	□□□□□ -0.5
PSMC3-205	ENST00000528362	OSBPL1A	Q9BXW6	950 aa		11.93	□□□□□ -0.5
PSMC3-205	ENST00000528362	FZD3	Q9NPG1	666 aa		11.93	□□□□□ -0.5
PSMC3-205	ENST00000528362	ABHD10	Q9NUJ1	306 aa		11.93	□□□□□ -0.5
PSMC3-205	ENST00000528362	ANGPTL2	Q9UKU9	493 aa		11.93	□□□□□ -0.5
PSMC3-205	ENST00000528362	ITM2B	Q9Y287	266 aa		11.93	□□□□□ -0.5
PSMC3-205	ENST00000528362	BTBD3	Q9Y2F9	522 aa		11.93	□□□□□ -0.5
PSMC3-205	ENST00000528362	TPR	P12270	2363 aa	Known RBP	11.93	□□□□□ -0.5
PSMC3-205	ENST00000528362	PI4KA	P42356	2102 aa		11.92	□□□□□ -0.5
PSMC3-205	ENST00000528362		A0A1B0GTQ1	180 aa		11.92	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms