RNA–Protein interactions for RNA: ENST00000528336.1

PCF11-202, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 5

Gene PCF11, Length 1,041 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-202ENST00000528336 POLBP06746 335 aa6.22□□□□□ -1.41
PCF11-202ENST00000528336 HNF1BP35680 557 aa6.22□□□□□ -1.41
PCF11-202ENST00000528336 MTNR1AP48039 350 aa6.22□□□□□ -1.41
PCF11-202ENST00000528336 UBE3AQ05086 875 aa6.22□□□□□ -1.41
PCF11-202ENST00000528336 PRKG2Q13237 762 aa6.22□□□□□ -1.41
PCF11-202ENST00000528336 LRRTM4Q86VH4 590 aa6.22□□□□□ -1.41
PCF11-202ENST00000528336 FAM217AQ8IXS0 508 aa6.22□□□□□ -1.41
PCF11-202ENST00000528336 USP38Q8NB14 1042 aa6.22□□□□□ -1.41
PCF11-202ENST00000528336 FAR1Q8WVX9 515 aa6.22□□□□□ -1.41
PCF11-202ENST00000528336 MAELQ96JY0 434 aaKnown RBP6.22□□□□□ -1.41
PCF11-202ENST00000528336 FZD3Q9NPG1 666 aa6.22□□□□□ -1.41
PCF11-202ENST00000528336 SH3GLB2Q9NR46 395 aa6.22□□□□□ -1.41
PCF11-202ENST00000528336 SMYD2Q9NRG4 433 aa6.22□□□□□ -1.41
PCF11-202ENST00000528336 ZDHHC7Q9NXF8 308 aa6.22□□□□□ -1.41
PCF11-202ENST00000528336 RAP2CQ9Y3L5 183 aa6.22□□□□□ -1.41
PCF11-202ENST00000528336 TTLL3Q9Y4R7 772 aa6.22□□□□□ -1.41
PCF11-202ENST00000528336 KDM5BQ9UGL1 1544 aa6.21□□□□□ -1.42
PCF11-202ENST00000528336 TSPAN3O60637 253 aa6.21□□□□□ -1.42
PCF11-202ENST00000528336 BMP15O95972 392 aa6.21□□□□□ -1.42
PCF11-202ENST00000528336 TNFRSF1BP20333 461 aa6.21□□□□□ -1.42
PCF11-202ENST00000528336 SCP2P22307 547 aa6.21□□□□□ -1.42
PCF11-202ENST00000528336 PRKCHP24723 683 aa6.21□□□□□ -1.42
PCF11-202ENST00000528336 TNFSF8P32971 234 aa6.21□□□□□ -1.42
PCF11-202ENST00000528336 PPATQ06203 517 aa6.21□□□□□ -1.42
PCF11-202ENST00000528336 ZNF260Q3ZCT1 412 aa6.21□□□□□ -1.42
PCF11-202ENST00000528336 FBXO43Q4G163 708 aa6.21□□□□□ -1.42
PCF11-202ENST00000528336 ATG16L1Q676U5 607 aa6.21□□□□□ -1.42
PCF11-202ENST00000528336 TRAPPC11Q7Z392 1133 aa6.21□□□□□ -1.42
PCF11-202ENST00000528336 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.21□□□□□ -1.42
PCF11-202ENST00000528336 FAM185AQ8N0U4 392 aa6.21□□□□□ -1.42
PCF11-202ENST00000528336 CHCHD4Q8N4Q1 142 aa6.21□□□□□ -1.42
PCF11-202ENST00000528336 HERVK_113Q902F9 699 aa6.21□□□□□ -1.42
PCF11-202ENST00000528336 EIF2AK1Q9BQI3 630 aaKnown RBP6.21□□□□□ -1.42
PCF11-202ENST00000528336 NPLQ9BXD5 320 aaPredicted RBP6.21□□□□□ -1.42
PCF11-202ENST00000528336 SEZ6LQ9BYH1 1024 aa6.21□□□□□ -1.42
PCF11-202ENST00000528336 MROH8Q9H579 483 aa6.21□□□□□ -1.42
PCF11-202ENST00000528336 TASP1Q9H6P5 420 aa6.21□□□□□ -1.42
PCF11-202ENST00000528336 MAP6D1Q9H9H5 199 aa6.21□□□□□ -1.42
PCF11-202ENST00000528336 TBC1D14Q9P2M4 693 aa6.21□□□□□ -1.42
PCF11-202ENST00000528336 NLKQ9UBE8 527 aa6.21□□□□□ -1.42
PCF11-202ENST00000528336 HDAC6Q9UBN7 1215 aa6.21□□□□□ -1.42
PCF11-202ENST00000528336 MAPKBP1O60336 1514 aa6.2□□□□□ -1.42
PCF11-202ENST00000528336 FAM170AA1A519 330 aa6.2□□□□□ -1.42
PCF11-202ENST00000528336 OR6C68A6NDL8 312 aa6.2□□□□□ -1.42
PCF11-202ENST00000528336 DDTLA6NHG4 134 aaPredicted RBP6.2□□□□□ -1.42
PCF11-202ENST00000528336 RRN3P2A6NIE6 340 aa6.2□□□□□ -1.42
PCF11-202ENST00000528336 H0YGN5 161 aa6.2□□□□□ -1.42
PCF11-202ENST00000528336 HBP1O60381 514 aa6.2□□□□□ -1.42
PCF11-202ENST00000528336 TMCC2O75069 709 aa6.2□□□□□ -1.42
PCF11-202ENST00000528336 IFNA2P01563 188 aa6.2□□□□□ -1.42
PCF11-202ENST00000528336 IGKV2-30P06310 120 aa6.2□□□□□ -1.42
PCF11-202ENST00000528336 PYGLP06737 847 aa6.2□□□□□ -1.42
PCF11-202ENST00000528336 FGF2P09038 288 aa6.2□□□□□ -1.42
PCF11-202ENST00000528336 GJC1P36383 396 aa6.2□□□□□ -1.42
PCF11-202ENST00000528336 LAMB3Q13751 1172 aa6.2□□□□□ -1.42
PCF11-202ENST00000528336 ODF3L2Q3SX64 289 aa6.2□□□□□ -1.42
PCF11-202ENST00000528336 SYTL3Q4VX76 610 aa6.2□□□□□ -1.42
PCF11-202ENST00000528336 MAP3K21Q5TCX8 1036 aa6.2□□□□□ -1.42
PCF11-202ENST00000528336 NAPEPLDQ6IQ20 393 aa6.2□□□□□ -1.42
PCF11-202ENST00000528336 WDR5BQ86VZ2 330 aa6.2□□□□□ -1.42
PCF11-202ENST00000528336 GHDCQ8N2G8 530 aa6.2□□□□□ -1.42
PCF11-202ENST00000528336 SETD9Q8NE22 299 aa6.2□□□□□ -1.42
PCF11-202ENST00000528336 INPP5DQ92835 1189 aa6.2□□□□□ -1.42
PCF11-202ENST00000528336 VCPIP1Q96JH7 1222 aa6.2□□□□□ -1.42
PCF11-202ENST00000528336 CDHR1Q96JP9 859 aa6.2□□□□□ -1.42
PCF11-202ENST00000528336 TEFMQ96QE5 360 aaKnown RBP6.2□□□□□ -1.42
PCF11-202ENST00000528336 FRG2BQ96QU4 278 aa6.2□□□□□ -1.42
PCF11-202ENST00000528336 B3GNT4Q9C0J1 378 aa6.2□□□□□ -1.42
PCF11-202ENST00000528336 UNC45AQ9H3U1 944 aa6.2□□□□□ -1.42
PCF11-202ENST00000528336 TTC12Q9H892 705 aaPredicted RBP6.2□□□□□ -1.42
PCF11-202ENST00000528336 RNF146Q9NTX7 359 aa6.2□□□□□ -1.42
PCF11-202ENST00000528336 BLOC1S4Q9NUP1 217 aa6.2□□□□□ -1.42
PCF11-202ENST00000528336 OSGIN2Q9Y236 505 aa6.2□□□□□ -1.42
PCF11-202ENST00000528336 RAPGEF6Q8TEU7 1601 aa6.2□□□□□ -1.42
PCF11-202ENST00000528336 NUP153P49790 1475 aaKnown RBP6.2□□□□□ -1.42
PCF11-202ENST00000528336 MST1RQ04912 1400 aa6.19□□□□□ -1.42
PCF11-202ENST00000528336 CASKIN1Q8WXD9 1431 aa6.19□□□□□ -1.42
PCF11-202ENST00000528336 SH2D7A6NKC9 451 aaPredicted RBP6.19□□□□□ -1.42
PCF11-202ENST00000528336 B4DGG1 531 aa6.19□□□□□ -1.42
PCF11-202ENST00000528336 MDM4O15151 490 aa6.19□□□□□ -1.42
PCF11-202ENST00000528336 NCAM2O15394 837 aa6.19□□□□□ -1.42
PCF11-202ENST00000528336 IL1AP01583 271 aa6.19□□□□□ -1.42
PCF11-202ENST00000528336 CCR5P51681 352 aa6.19□□□□□ -1.42
PCF11-202ENST00000528336 MPP1Q00013 466 aa6.19□□□□□ -1.42
PCF11-202ENST00000528336 ROR1Q01973 937 aa6.19□□□□□ -1.42
PCF11-202ENST00000528336 CHRNDQ07001 517 aa6.19□□□□□ -1.42
PCF11-202ENST00000528336 NAA25Q14CX7 972 aa6.19□□□□□ -1.42
PCF11-202ENST00000528336 LEXMQ3ZCV2 418 aa6.19□□□□□ -1.42
PCF11-202ENST00000528336 WASHC2DQ5SRD0 308 aa6.19□□□□□ -1.42
PCF11-202ENST00000528336 FAM180BQ6P0A1 224 aa6.19□□□□□ -1.42
PCF11-202ENST00000528336 SLC16A12Q6ZSM3 486 aa6.19□□□□□ -1.42
PCF11-202ENST00000528336 TBC1D1Q86TI0 1168 aaPredicted RBP6.19□□□□□ -1.42
PCF11-202ENST00000528336 TRIM74Q86UV6 250 aa6.19□□□□□ -1.42
PCF11-202ENST00000528336 TRIM73Q86UV7 250 aa6.19□□□□□ -1.42
PCF11-202ENST00000528336 NDUFAF2Q8N183 169 aa6.19□□□□□ -1.42
PCF11-202ENST00000528336 HORMAD2Q8N7B1 307 aa6.19□□□□□ -1.42
PCF11-202ENST00000528336 LPAR1Q92633 364 aa6.19□□□□□ -1.42
PCF11-202ENST00000528336 FAM234AQ9H0X4 552 aa6.19□□□□□ -1.42
PCF11-202ENST00000528336 TAOK3Q9H2K8 898 aa6.19□□□□□ -1.42
PCF11-202ENST00000528336 CXorf56Q9H5V9 222 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms