RNA–Protein interactions for RNA: ENST00000528280.1

CHD7-208, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-208ENST00000528280 SPAARA0A1B0GVQ0 90 aa9.77□□□□□ -0.85
CHD7-208ENST00000528280 A0A1W2PR77 199 aa9.77□□□□□ -0.85
CHD7-208ENST00000528280 FAM221BA6H8Z2 402 aa9.77□□□□□ -0.85
CHD7-208ENST00000528280 CBFA2T2O43439 604 aa9.77□□□□□ -0.85
CHD7-208ENST00000528280 TSPAN6O43657 245 aa9.77□□□□□ -0.85
CHD7-208ENST00000528280 AP1G1O43747 822 aa9.77□□□□□ -0.85
CHD7-208ENST00000528280 CBFA2T3O75081 653 aa9.77□□□□□ -0.85
CHD7-208ENST00000528280 ZNF821O75541 412 aaPredicted RBP9.77□□□□□ -0.85
CHD7-208ENST00000528280 LEFTY1O75610 366 aa9.77□□□□□ -0.85
CHD7-208ENST00000528280 PCDH8O95206 1070 aa9.77□□□□□ -0.85
CHD7-208ENST00000528280 TOP3BO95985 862 aaKnown RBP9.77□□□□□ -0.85
CHD7-208ENST00000528280 ITGAVP06756 1048 aa9.77□□□□□ -0.85
CHD7-208ENST00000528280 GLDCP23378 1020 aa9.77□□□□□ -0.85
CHD7-208ENST00000528280 AKT2P31751 481 aa9.77□□□□□ -0.85
CHD7-208ENST00000528280 PCK1P35558 622 aa9.77□□□□□ -0.85
CHD7-208ENST00000528280 ACVRL1P37023 503 aa9.77□□□□□ -0.85
CHD7-208ENST00000528280 RXRGP48443 463 aa9.77□□□□□ -0.85
CHD7-208ENST00000528280 NUMBP49757 651 aa9.77□□□□□ -0.85
CHD7-208ENST00000528280 CCNHP51946 323 aaPredicted RBP9.77□□□□□ -0.85
CHD7-208ENST00000528280 NEK3P51956 506 aa9.77□□□□□ -0.85
CHD7-208ENST00000528280 TPI1P60174 286 aa9.77□□□□□ -0.85
CHD7-208ENST00000528280 SGCGQ13326 291 aa9.77□□□□□ -0.85
CHD7-208ENST00000528280 PIGHQ14442 188 aaPredicted RBP9.77□□□□□ -0.85
CHD7-208ENST00000528280 TSR1Q2NL82 804 aaKnown RBP9.77□□□□□ -0.85
CHD7-208ENST00000528280 ZSCAN23Q3MJ62 389 aa9.77□□□□□ -0.85
CHD7-208ENST00000528280 ZNF805Q5CZA5 627 aa9.77□□□□□ -0.85
CHD7-208ENST00000528280 TMCO4Q5TGY1 634 aa9.77□□□□□ -0.85
CHD7-208ENST00000528280 KIAA1161Q6NSJ0 714 aa9.77□□□□□ -0.85
CHD7-208ENST00000528280 HORMAD1Q86X24 394 aa9.77□□□□□ -0.85
CHD7-208ENST00000528280 LZTR1Q8N653 840 aa9.77□□□□□ -0.85
CHD7-208ENST00000528280 OR2AP1Q8NGE2 309 aa9.77□□□□□ -0.85
CHD7-208ENST00000528280 ASB12Q8WXK4 309 aa9.77□□□□□ -0.85
CHD7-208ENST00000528280 KLHDC7BQ96G42 594 aa9.77□□□□□ -0.85
CHD7-208ENST00000528280 SLC6A18Q96N87 628 aa9.77□□□□□ -0.85
CHD7-208ENST00000528280 IL21RQ9HBE5 538 aa9.77□□□□□ -0.85
CHD7-208ENST00000528280 TAS2R14Q9NYV8 317 aa9.77□□□□□ -0.85
CHD7-208ENST00000528280 LCMT1Q9UIC8 334 aa9.77□□□□□ -0.85
CHD7-208ENST00000528280 FNDC3AQ9Y2H6 1198 aaKnown RBP9.77□□□□□ -0.85
CHD7-208ENST00000528280 MFHAS1Q9Y4C4 1052 aa9.77□□□□□ -0.85
CHD7-208ENST00000528280 NEUROG3Q9Y4Z2 214 aa9.77□□□□□ -0.85
CHD7-208ENST00000528280 HS3ST3A1Q9Y663 406 aa9.77□□□□□ -0.85
CHD7-208ENST00000528280 ADAMTS9Q9P2N4 1935 aa9.77□□□□□ -0.85
CHD7-208ENST00000528280 LAMA5O15230 3695 aa9.77□□□□□ -0.85
CHD7-208ENST00000528280 A0A1W2PQU0 124 aa9.76□□□□□ -0.85
CHD7-208ENST00000528280 ARHGAP42A6NI28 874 aa9.76□□□□□ -0.85
CHD7-208ENST00000528280 RASA4BC9J798 803 aa9.76□□□□□ -0.85
CHD7-208ENST00000528280 H0Y8X5 98 aa9.76□□□□□ -0.85
CHD7-208ENST00000528280 KRIT1O00522 736 aa9.76□□□□□ -0.85
CHD7-208ENST00000528280 DDX3XO00571 662 aaKnown RBP eCLIP9.76□□□□□ -0.85
CHD7-208ENST00000528280 RASA4O43374 803 aa9.76□□□□□ -0.85
CHD7-208ENST00000528280 TNFSF14O43557 240 aa9.76□□□□□ -0.85
CHD7-208ENST00000528280 IGSF6O95976 241 aa9.76□□□□□ -0.85
CHD7-208ENST00000528280 CTSLP07711 333 aa9.76□□□□□ -0.85
CHD7-208ENST00000528280 TPM1P09493 284 aa9.76□□□□□ -0.85
CHD7-208ENST00000528280 C1SP09871 688 aa9.76□□□□□ -0.85
CHD7-208ENST00000528280 SKILP12757 684 aa9.76□□□□□ -0.85
CHD7-208ENST00000528280 HNRNPA2B1P22626 353 aaKnown RBP9.76□□□□□ -0.85
CHD7-208ENST00000528280 PBX1P40424 430 aa9.76□□□□□ -0.85
CHD7-208ENST00000528280 NXPH1P58417 271 aa9.76□□□□□ -0.85
CHD7-208ENST00000528280 TAS2R38P59533 333 aa9.76□□□□□ -0.85
CHD7-208ENST00000528280 SERINC3Q13530 473 aa9.76□□□□□ -0.85
CHD7-208ENST00000528280 POM121L1PQ3SYA9 428 aa9.76□□□□□ -0.85
CHD7-208ENST00000528280 RAB6CQ53S08 254 aa9.76□□□□□ -0.85
CHD7-208ENST00000528280 TDRD12Q587J7 1177 aaKnown RBP9.76□□□□□ -0.85
CHD7-208ENST00000528280 PIP5KL1Q5T9C9 394 aa9.76□□□□□ -0.85
CHD7-208ENST00000528280 GDPD4Q6W3E5 623 aa9.76□□□□□ -0.85
CHD7-208ENST00000528280 TTC7BQ86TV6 843 aa9.76□□□□□ -0.85
CHD7-208ENST00000528280 CHST14Q8NCH0 376 aa9.76□□□□□ -0.85
CHD7-208ENST00000528280 GRIN3AQ8TCU5 1115 aa9.76□□□□□ -0.85
CHD7-208ENST00000528280 CPLX3Q8WVH0 158 aa9.76□□□□□ -0.85
CHD7-208ENST00000528280 ADAMTS14Q8WXS8 1223 aa9.76□□□□□ -0.85
CHD7-208ENST00000528280 ZNF653Q96CK0 615 aa9.76□□□□□ -0.85
CHD7-208ENST00000528280 IFT43Q96FT9 208 aa9.76□□□□□ -0.85
CHD7-208ENST00000528280 GDAP1L1Q96MZ0 367 aa9.76□□□□□ -0.85
CHD7-208ENST00000528280 CAMK1GQ96NX5 476 aa9.76□□□□□ -0.85
CHD7-208ENST00000528280 SCNM1Q9BWG6 230 aa9.76□□□□□ -0.85
CHD7-208ENST00000528280 CPEB1Q9BZB8 566 aaKnown RBP9.76□□□□□ -0.85
CHD7-208ENST00000528280 RAB6CQ9H0N0 254 aa9.76□□□□□ -0.85
CHD7-208ENST00000528280 DHX35Q9H5Z1 703 aaKnown RBP9.76□□□□□ -0.85
CHD7-208ENST00000528280 ZWILCHQ9H900 591 aa9.76□□□□□ -0.85
CHD7-208ENST00000528280 EBF2Q9HAK2 575 aa9.76□□□□□ -0.85
CHD7-208ENST00000528280 NDFIP2Q9NV92 336 aa9.76□□□□□ -0.85
CHD7-208ENST00000528280 ZNHIT6Q9NWK9 470 aaKnown RBP9.76□□□□□ -0.85
CHD7-208ENST00000528280 IP6K2Q9UHH9 426 aa9.76□□□□□ -0.85
CHD7-208ENST00000528280 AP4E1Q9UPM8 1137 aa9.76□□□□□ -0.85
CHD7-208ENST00000528280 FCF1Q9Y324 198 aaKnown RBP9.76□□□□□ -0.85
CHD7-208ENST00000528280 MSRB2Q9Y3D2 182 aa9.76□□□□□ -0.85
CHD7-208ENST00000528280 WASF2Q9Y6W5 498 aa9.76□□□□□ -0.85
CHD7-208ENST00000528280 NUMA1Q14980 2115 aa9.76□□□□□ -0.85
CHD7-208ENST00000528280 CYSRT1A8MQ03 144 aa9.75□□□□□ -0.85
CHD7-208ENST00000528280 EEF2KO00418 725 aaKnown RBP9.75□□□□□ -0.85
CHD7-208ENST00000528280 PLK4O00444 970 aa9.75□□□□□ -0.85
CHD7-208ENST00000528280 NEMP1O14524 444 aa9.75□□□□□ -0.85
CHD7-208ENST00000528280 KCNK3O14649 394 aa9.75□□□□□ -0.85
CHD7-208ENST00000528280 TOR1BO14657 336 aa9.75□□□□□ -0.85
CHD7-208ENST00000528280 SLC31A1O15431 190 aa9.75□□□□□ -0.85
CHD7-208ENST00000528280 CD160O95971 181 aa9.75□□□□□ -0.85
CHD7-208ENST00000528280 ADRB3P13945 408 aa9.75□□□□□ -0.85
CHD7-208ENST00000528280 MIPP30301 263 aa9.75□□□□□ -0.85
CHD7-208ENST00000528280 MAT2AP31153 395 aaKnown RBP9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms