RNA–Protein interactions for RNA: ENST00000527817.1

SRPRA-202, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2

Gene SRPRA, Length 687 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-202ENST00000527817 ZNF658Q5TYW1 1059 aaPredicted RBP12.53□□□□□ -0.4
SRPRA-202ENST00000527817 C22orf39Q6P5X5 142 aa12.53□□□□□ -0.4
SRPRA-202ENST00000527817 LVRNQ6Q4G3 990 aa12.53□□□□□ -0.4
SRPRA-202ENST00000527817 PLPP6Q8IY26 295 aa12.53□□□□□ -0.4
SRPRA-202ENST00000527817 ZNF683Q8IZ20 524 aa12.53□□□□□ -0.4
SRPRA-202ENST00000527817 PHACTR4Q8IZ21 702 aa12.53□□□□□ -0.4
SRPRA-202ENST00000527817 PCDH20Q8N6Y1 951 aaKnown RBP12.53□□□□□ -0.4
SRPRA-202ENST00000527817 RAB7BQ96AH8 199 aa12.53□□□□□ -0.4
SRPRA-202ENST00000527817 CENPTQ96BT3 561 aa12.53□□□□□ -0.4
SRPRA-202ENST00000527817 CCDC34Q96HJ3 373 aa12.53□□□□□ -0.4
SRPRA-202ENST00000527817 SLC13A1Q9BZW2 595 aa12.53□□□□□ -0.4
SRPRA-202ENST00000527817 CEP44Q9C0F1 390 aa12.53□□□□□ -0.4
SRPRA-202ENST00000527817 STRADBQ9C0K7 418 aa12.53□□□□□ -0.4
SRPRA-202ENST00000527817 CLPBQ9H078 707 aa12.53□□□□□ -0.4
SRPRA-202ENST00000527817 TNKS2Q9H2K2 1166 aa12.53□□□□□ -0.4
SRPRA-202ENST00000527817 TCEAL2Q9H3H9 227 aaPredicted RBP12.53□□□□□ -0.4
SRPRA-202ENST00000527817 RMND1Q9NWS8 449 aa12.53□□□□□ -0.4
SRPRA-202ENST00000527817 SEPT10Q9P0V9 454 aa12.53□□□□□ -0.4
SRPRA-202ENST00000527817 ANKMY1Q9P2S6 941 aa12.53□□□□□ -0.4
SRPRA-202ENST00000527817 APOBEC3BQ9UH17 382 aaKnown RBP12.53□□□□□ -0.4
SRPRA-202ENST00000527817 TOR1BO14657 336 aa12.52□□□□□ -0.41
SRPRA-202ENST00000527817 HSF2BPO75031 334 aa12.52□□□□□ -0.41
SRPRA-202ENST00000527817 LETM1O95202 739 aaPredicted RBP12.52□□□□□ -0.41
SRPRA-202ENST00000527817 FAM87AP0C7U9 286 aa12.52□□□□□ -0.41
SRPRA-202ENST00000527817 LIPCP11150 499 aa12.52□□□□□ -0.41
SRPRA-202ENST00000527817 CCKBRP32239 447 aa12.52□□□□□ -0.41
SRPRA-202ENST00000527817 NOS2P35228 1153 aa12.52□□□□□ -0.41
SRPRA-202ENST00000527817 THOP1P52888 689 aa12.52□□□□□ -0.41
SRPRA-202ENST00000527817 PDCLQ13371 301 aa12.52□□□□□ -0.41
SRPRA-202ENST00000527817 CARD16Q5EG05 197 aa12.52□□□□□ -0.41
SRPRA-202ENST00000527817 ACBD5Q5T8D3 534 aaPredicted RBP12.52□□□□□ -0.41
SRPRA-202ENST00000527817 FAXCQ5TGI0 409 aa12.52□□□□□ -0.41
SRPRA-202ENST00000527817 RETSATQ6NUM9 610 aa12.52□□□□□ -0.41
SRPRA-202ENST00000527817 LINGO4Q6UY18 593 aa12.52□□□□□ -0.41
SRPRA-202ENST00000527817 B3GNT8Q7Z7M8 397 aa12.52□□□□□ -0.41
SRPRA-202ENST00000527817 JAMLQ86YT9 394 aa12.52□□□□□ -0.41
SRPRA-202ENST00000527817 RBFAQ8N0V3 343 aa12.52□□□□□ -0.41
SRPRA-202ENST00000527817 SDR16C5Q8N3Y7 309 aa12.52□□□□□ -0.41
SRPRA-202ENST00000527817 WDTC1Q8N5D0 677 aa12.52□□□□□ -0.41
SRPRA-202ENST00000527817 ZSCAN1Q8NBB4 408 aa12.52□□□□□ -0.41
SRPRA-202ENST00000527817 C1orf74Q96LT6 269 aa12.52□□□□□ -0.41
SRPRA-202ENST00000527817 CEP63Q96MT8 703 aa12.52□□□□□ -0.41
SRPRA-202ENST00000527817 TMEM74Q96NL1 305 aa12.52□□□□□ -0.41
SRPRA-202ENST00000527817 GSDMAQ96QA5 445 aa12.52□□□□□ -0.41
SRPRA-202ENST00000527817 GFM1Q96RP9 751 aaKnown RBP12.52□□□□□ -0.41
SRPRA-202ENST00000527817 LRRC61Q9BV99 259 aa12.52□□□□□ -0.41
SRPRA-202ENST00000527817 GTPBP4Q9BZE4 634 aaKnown RBP12.52□□□□□ -0.41
SRPRA-202ENST00000527817 GOLPH3LQ9H4A5 285 aa12.52□□□□□ -0.41
SRPRA-202ENST00000527817 EPB41L5Q9HCM4 733 aa12.52□□□□□ -0.41
SRPRA-202ENST00000527817 WDR70Q9NW82 654 aa12.52□□□□□ -0.41
SRPRA-202ENST00000527817 GEMIN8Q9NWZ8 242 aaKnown RBP12.52□□□□□ -0.41
SRPRA-202ENST00000527817 ARHGEF38Q9NXL2 777 aa12.52□□□□□ -0.41
SRPRA-202ENST00000527817 SEPT3Q9UH03 358 aa12.52□□□□□ -0.41
SRPRA-202ENST00000527817 PNMA8BQ9ULN7 279 aaPredicted RBP12.52□□□□□ -0.41
SRPRA-202ENST00000527817 USP9YO00507 2555 aaPredicted RBP12.51□□□□□ -0.41
SRPRA-202ENST00000527817 ILVBLA1L0T0 632 aa12.51□□□□□ -0.41
SRPRA-202ENST00000527817 TRIM49BA6NDI0 452 aa12.51□□□□□ -0.41
SRPRA-202ENST00000527817 C16orf96A6NNT2 1141 aa12.51□□□□□ -0.41
SRPRA-202ENST00000527817 M0QYT0 321 aa12.51□□□□□ -0.41
SRPRA-202ENST00000527817 PPFIA2O75334 1257 aa12.51□□□□□ -0.41
SRPRA-202ENST00000527817 ZMPSTE24O75844 475 aa12.51□□□□□ -0.41
SRPRA-202ENST00000527817 ENDOD1O94919 500 aa12.51□□□□□ -0.41
SRPRA-202ENST00000527817 ADCY5O95622 1261 aa12.51□□□□□ -0.41
SRPRA-202ENST00000527817 KRT5P13647 590 aa12.51□□□□□ -0.41
SRPRA-202ENST00000527817 TSHRP16473 764 aa12.51□□□□□ -0.41
SRPRA-202ENST00000527817 GGCXP38435 758 aa12.51□□□□□ -0.41
SRPRA-202ENST00000527817 CXCR3P49682 368 aa12.51□□□□□ -0.41
SRPRA-202ENST00000527817 KRT85P78386 507 aa12.51□□□□□ -0.41
SRPRA-202ENST00000527817 CCL7P80098 99 aa12.51□□□□□ -0.41
SRPRA-202ENST00000527817 NME3Q13232 169 aa12.51□□□□□ -0.41
SRPRA-202ENST00000527817 SRSF6Q13247 344 aaKnown RBP12.51□□□□□ -0.41
SRPRA-202ENST00000527817 PNOCQ13519 176 aa12.51□□□□□ -0.41
SRPRA-202ENST00000527817 UBAP2LQ14157 1087 aaKnown RBP12.51□□□□□ -0.41
SRPRA-202ENST00000527817 BRMS1LQ5PSV4 323 aa12.51□□□□□ -0.41
SRPRA-202ENST00000527817 LRRC31Q6UY01 552 aa12.51□□□□□ -0.41
SRPRA-202ENST00000527817 ZNF783Q6ZMS7 281 aa12.51□□□□□ -0.41
SRPRA-202ENST00000527817 FSTL5Q8N475 847 aaPredicted RBP12.51□□□□□ -0.41
SRPRA-202ENST00000527817 OR6C4Q8NGE1 309 aa12.51□□□□□ -0.41
SRPRA-202ENST00000527817 SCG3Q8WXD2 468 aaKnown RBP12.51□□□□□ -0.41
SRPRA-202ENST00000527817 ISG20Q96AZ6 181 aaKnown RBP12.51□□□□□ -0.41
SRPRA-202ENST00000527817 PPP1R13BQ96KQ4 1090 aa12.51□□□□□ -0.41
SRPRA-202ENST00000527817 CPXM1Q96SM3 734 aa12.51□□□□□ -0.41
SRPRA-202ENST00000527817 SLC25A18Q9H1K4 315 aa12.51□□□□□ -0.41
SRPRA-202ENST00000527817 WDCPQ9H6R7 721 aa12.51□□□□□ -0.41
SRPRA-202ENST00000527817 TMEM51Q9NW97 253 aa12.51□□□□□ -0.41
SRPRA-202ENST00000527817 RRN3Q9NYV6 651 aa12.51□□□□□ -0.41
SRPRA-202ENST00000527817 GULP1Q9UBP9 304 aa12.51□□□□□ -0.41
SRPRA-202ENST00000527817 RABGEF1Q9UJ41 708 aa12.51□□□□□ -0.41
SRPRA-202ENST00000527817 NOTCH2Q04721 2471 aa12.51□□□□□ -0.41
SRPRA-202ENST00000527817 SPTAN1Q13813 2472 aaKnown RBP12.51□□□□□ -0.41
SRPRA-202ENST00000527817 RELNP78509 3460 aa12.51□□□□□ -0.41
SRPRA-202ENST00000527817 USP9XQ93008 2570 aaPredicted RBP12.51□□□□□ -0.41
SRPRA-202ENST00000527817 IGLV3-10A0A075B6K4 115 aa12.5□□□□□ -0.41
SRPRA-202ENST00000527817 NBPF19A0A087WUL8 3843 aa12.5□□□□□ -0.41
SRPRA-202ENST00000527817 CXorf51AA0A1B0GTR3 108 aa12.5□□□□□ -0.41
SRPRA-202ENST00000527817 D6RAR5 112 aa12.5□□□□□ -0.41
SRPRA-202ENST00000527817 THAP12O43422 761 aa12.5□□□□□ -0.41
SRPRA-202ENST00000527817 GRAP2O75791 330 aa12.5□□□□□ -0.41
SRPRA-202ENST00000527817 GP1BBP13224 206 aa12.5□□□□□ -0.41
SRPRA-202ENST00000527817 GNA15P30679 374 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms