RNA–Protein interactions for RNA: ENST00000527720.5

USH1C-207, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-207ENST00000527720 RUVBL2Q9Y230 463 aaKnown RBP15.54■□□□□ 0.08
USH1C-207ENST00000527720 IGLV3-10A0A075B6K4 115 aa15.54■□□□□ 0.08
USH1C-207ENST00000527720 A0A087X1B8 175 aa15.54■□□□□ 0.08
USH1C-207ENST00000527720 FAM95CA0A1B0GW59 222 aa15.54■□□□□ 0.08
USH1C-207ENST00000527720 HEATR9A2RTY3 570 aa15.54■□□□□ 0.08
USH1C-207ENST00000527720 TARM1B6A8C7 271 aa15.54■□□□□ 0.08
USH1C-207ENST00000527720 SLCO1B7G3V0H7 640 aa15.54■□□□□ 0.08
USH1C-207ENST00000527720 LIN7AO14910 233 aaPredicted RBP15.54■□□□□ 0.08
USH1C-207ENST00000527720 PEX11BO96011 259 aa15.54■□□□□ 0.08
USH1C-207ENST00000527720 F7P08709 466 aaPredicted RBP15.54■□□□□ 0.08
USH1C-207ENST00000527720 ACADSP16219 412 aa15.54■□□□□ 0.08
USH1C-207ENST00000527720 OR1G1P47890 313 aa15.54■□□□□ 0.08
USH1C-207ENST00000527720 CD151P48509 253 aa15.54■□□□□ 0.08
USH1C-207ENST00000527720 NUMBP49757 651 aa15.54■□□□□ 0.08
USH1C-207ENST00000527720 PSEN1P49768 467 aa15.54■□□□□ 0.08
USH1C-207ENST00000527720 LRRC8EQ6NSJ5 796 aa15.54■□□□□ 0.08
USH1C-207ENST00000527720 TRAF7Q6Q0C0 670 aa15.54■□□□□ 0.08
USH1C-207ENST00000527720 PDCD6IPQ8WUM4 868 aaKnown RBP15.54■□□□□ 0.08
USH1C-207ENST00000527720 IMP4Q96G21 291 aaKnown RBP15.54■□□□□ 0.08
USH1C-207ENST00000527720 FAM193BQ96PV7 902 aaPredicted RBP15.54■□□□□ 0.08
USH1C-207ENST00000527720 GPAMQ9HCL2 828 aa15.54■□□□□ 0.08
USH1C-207ENST00000527720 CLIC5Q9NZA1 410 aa15.54■□□□□ 0.08
USH1C-207ENST00000527720 CPSF2Q9P2I0 782 aaKnown RBP15.54■□□□□ 0.08
USH1C-207ENST00000527720 SLC7A8Q9UHI5 535 aa15.54■□□□□ 0.08
USH1C-207ENST00000527720 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.53■□□□□ 0.08
USH1C-207ENST00000527720 CCDC78A2IDD5 438 aa15.53■□□□□ 0.08
USH1C-207ENST00000527720 TK2O00142 265 aa15.53■□□□□ 0.08
USH1C-207ENST00000527720 PHGDHO43175 533 aaKnown RBP15.53■□□□□ 0.08
USH1C-207ENST00000527720 SBK3P0C264 359 aa15.53■□□□□ 0.08
USH1C-207ENST00000527720 SLC1A2P43004 574 aa15.53■□□□□ 0.08
USH1C-207ENST00000527720 WNT3AP56704 352 aa15.53■□□□□ 0.08
USH1C-207ENST00000527720 POU4F1Q01851 419 aa15.53■□□□□ 0.08
USH1C-207ENST00000527720 USP4Q13107 963 aa15.53■□□□□ 0.08
USH1C-207ENST00000527720 PRKAA1Q13131 559 aa15.53■□□□□ 0.08
USH1C-207ENST00000527720 MS4A13Q5J8X5 152 aa15.53■□□□□ 0.08
USH1C-207ENST00000527720 VARS2Q5ST30 1063 aaKnown RBP15.53■□□□□ 0.08
USH1C-207ENST00000527720 VWA5B1Q5TIE3 1220 aa15.53■□□□□ 0.08
USH1C-207ENST00000527720 SLC41A1Q8IVJ1 513 aa15.53■□□□□ 0.08
USH1C-207ENST00000527720 DENND6AQ8IWF6 608 aa15.53■□□□□ 0.08
USH1C-207ENST00000527720 CENPLQ8N0S6 344 aaPredicted RBP15.53■□□□□ 0.08
USH1C-207ENST00000527720 LINC01599Q8WXQ3 324 aa15.53■□□□□ 0.08
USH1C-207ENST00000527720 SCYL1Q96KG9 808 aa15.53■□□□□ 0.08
USH1C-207ENST00000527720 BTN2A3PQ96KV6 586 aa15.53■□□□□ 0.08
USH1C-207ENST00000527720 FTHL17Q9BXU8 183 aa15.53■□□□□ 0.08
USH1C-207ENST00000527720 TRPV6Q9H1D0 765 aa15.53■□□□□ 0.08
USH1C-207ENST00000527720 VTI1BQ9UEU0 232 aa15.53■□□□□ 0.08
USH1C-207ENST00000527720 ANGPTL2Q9UKU9 493 aa15.53■□□□□ 0.08
USH1C-207ENST00000527720 MOXD2PA6NHM9 499 aa15.52■□□□□ 0.08
USH1C-207ENST00000527720 OR6C75A6NL08 312 aa15.52■□□□□ 0.08
USH1C-207ENST00000527720 MATN2O00339 956 aa15.52■□□□□ 0.08
USH1C-207ENST00000527720 NVLO15381 856 aaKnown RBP15.52■□□□□ 0.08
USH1C-207ENST00000527720 TBX10O75333 385 aa15.52■□□□□ 0.08
USH1C-207ENST00000527720 TADA2AO75478 443 aa15.52■□□□□ 0.08
USH1C-207ENST00000527720 RTN3O95197 1032 aaPredicted RBP15.52■□□□□ 0.08
USH1C-207ENST00000527720 PAPSS2O95340 614 aaPredicted RBP15.52■□□□□ 0.08
USH1C-207ENST00000527720 GRIA4P48058 902 aa15.52■□□□□ 0.08
USH1C-207ENST00000527720 RPL14P50914 215 aaKnown RBP15.52■□□□□ 0.08
USH1C-207ENST00000527720 MPP1Q00013 466 aa15.52■□□□□ 0.08
USH1C-207ENST00000527720 CTBP1Q13363 440 aa15.52■□□□□ 0.08
USH1C-207ENST00000527720 TRIP4Q15650 581 aaPredicted RBP15.52■□□□□ 0.08
USH1C-207ENST00000527720 CNGA3Q16281 694 aa15.52■□□□□ 0.08
USH1C-207ENST00000527720 DDR2Q16832 855 aa15.52■□□□□ 0.08
USH1C-207ENST00000527720 SNX30Q5VWJ9 437 aa15.52■□□□□ 0.08
USH1C-207ENST00000527720 GALNT7Q86SF2 657 aa15.52■□□□□ 0.08
USH1C-207ENST00000527720 FSTL5Q8N475 847 aaPredicted RBP15.52■□□□□ 0.08
USH1C-207ENST00000527720 KCTD4Q8WVF5 259 aa15.52■□□□□ 0.08
USH1C-207ENST00000527720 DNAJC9Q8WXX5 260 aa15.52■□□□□ 0.08
USH1C-207ENST00000527720 GLT1D1Q96MS3 346 aa15.52■□□□□ 0.08
USH1C-207ENST00000527720 PANX3Q96QZ0 392 aa15.52■□□□□ 0.08
USH1C-207ENST00000527720 OXCT2Q9BYC2 517 aaPredicted RBP15.52■□□□□ 0.08
USH1C-207ENST00000527720 CXorf56Q9H5V9 222 aa15.52■□□□□ 0.08
USH1C-207ENST00000527720 CHD5Q8TDI0 1954 aa15.52■□□□□ 0.08
USH1C-207ENST00000527720 A0A088AWK7 358 aa15.52■□□□□ 0.07
USH1C-207ENST00000527720 SLC22A2O15244 555 aa15.52■□□□□ 0.07
USH1C-207ENST00000527720 HDAC3O15379 428 aa15.52■□□□□ 0.07
USH1C-207ENST00000527720 NCF2P19878 526 aaPredicted RBP15.52■□□□□ 0.07
USH1C-207ENST00000527720 ILF2Q12905 390 aaKnown RBP15.52■□□□□ 0.07
USH1C-207ENST00000527720 MTA1Q13330 715 aa15.52■□□□□ 0.07
USH1C-207ENST00000527720 MRPL58Q14197 206 aaKnown RBP15.52■□□□□ 0.07
USH1C-207ENST00000527720 NAA25Q14CX7 972 aa15.52■□□□□ 0.07
USH1C-207ENST00000527720 MUM1Q2TAK8 710 aa15.52■□□□□ 0.07
USH1C-207ENST00000527720 MARC1Q5VT66 337 aa15.52■□□□□ 0.07
USH1C-207ENST00000527720 LRRC74BQ6ZQY2 392 aa15.52■□□□□ 0.07
USH1C-207ENST00000527720 RIPOR1Q6ZS17 1223 aa15.52■□□□□ 0.07
USH1C-207ENST00000527720 MYLK4Q86YV6 388 aaPredicted RBP15.52■□□□□ 0.07
USH1C-207ENST00000527720 TEX26Q8N6G2 289 aa15.52■□□□□ 0.07
USH1C-207ENST00000527720 ZNF333Q96JL9 665 aa15.52■□□□□ 0.07
USH1C-207ENST00000527720 GPR78Q96P69 363 aa15.52■□□□□ 0.07
USH1C-207ENST00000527720 ZIC5Q96T25 663 aa15.52■□□□□ 0.07
USH1C-207ENST00000527720 TCF7L2Q9NQB0 619 aa15.52■□□□□ 0.07
USH1C-207ENST00000527720 COMMD8Q9NX08 183 aa15.52■□□□□ 0.07
USH1C-207ENST00000527720 GMIPQ9P107 970 aa15.52■□□□□ 0.07
USH1C-207ENST00000527720 SLC2A6Q9UGQ3 507 aa15.52■□□□□ 0.07
USH1C-207ENST00000527720 FBXO5Q9UKT4 447 aa15.52■□□□□ 0.07
USH1C-207ENST00000527720 CCNT2O60583 730 aaKnown RBP15.51■□□□□ 0.07
USH1C-207ENST00000527720 FKBP6O75344 327 aa15.51■□□□□ 0.07
USH1C-207ENST00000527720 ELNP15502 786 aa15.51■□□□□ 0.07
USH1C-207ENST00000527720 SAT1P21673 171 aa15.51■□□□□ 0.07
USH1C-207ENST00000527720 GLDCP23378 1020 aa15.51■□□□□ 0.07
USH1C-207ENST00000527720 YWHAQP27348 245 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms