RNA–Protein interactions for RNA: ENST00000525878.5

CSDE1-210, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-210ENST00000525878 UHRF2Q96PU4 802 aa4.21□□□□□ -1.74
CSDE1-210ENST00000525878 MYD88Q99836 296 aa4.21□□□□□ -1.74
CSDE1-210ENST00000525878 TUBA1CQ9BQE3 449 aa4.21□□□□□ -1.74
CSDE1-210ENST00000525878 CLPBQ9H078 707 aa4.21□□□□□ -1.74
CSDE1-210ENST00000525878 PABPC3Q9H361 631 aaKnown RBP4.21□□□□□ -1.74
CSDE1-210ENST00000525878 MVB12BQ9H7P6 319 aa4.21□□□□□ -1.74
CSDE1-210ENST00000525878 ACAD9Q9H845 621 aa4.21□□□□□ -1.74
CSDE1-210ENST00000525878 OBP2BQ9NPH6 170 aa4.21□□□□□ -1.74
CSDE1-210ENST00000525878 TMEM51Q9NW97 253 aa4.21□□□□□ -1.74
CSDE1-210ENST00000525878 HERC5Q9UII4 1024 aaKnown RBP4.21□□□□□ -1.74
CSDE1-210ENST00000525878 A0A096LPK6 155 aa4.2□□□□□ -1.74
CSDE1-210ENST00000525878 FAM90A20PA6NIJ5 464 aa4.2□□□□□ -1.74
CSDE1-210ENST00000525878 LGALS16A8MUM7 142 aa4.2□□□□□ -1.74
CSDE1-210ENST00000525878 CLGNO14967 610 aa4.2□□□□□ -1.74
CSDE1-210ENST00000525878 XPNPEP2O43895 674 aa4.2□□□□□ -1.74
CSDE1-210ENST00000525878 ACTL6BO94805 426 aa4.2□□□□□ -1.74
CSDE1-210ENST00000525878 CH25HO95992 272 aa4.2□□□□□ -1.74
CSDE1-210ENST00000525878 ACP5P13686 325 aa4.2□□□□□ -1.74
CSDE1-210ENST00000525878 SERPINA4P29622 427 aa4.2□□□□□ -1.74
CSDE1-210ENST00000525878 TECP42680 631 aa4.2□□□□□ -1.74
CSDE1-210ENST00000525878 CYP4A11Q02928 519 aa4.2□□□□□ -1.74
CSDE1-210ENST00000525878 TROAPQ12815 778 aa4.2□□□□□ -1.74
CSDE1-210ENST00000525878 STARD3Q14849 445 aa4.2□□□□□ -1.74
CSDE1-210ENST00000525878 KRT71Q3SY84 523 aa4.2□□□□□ -1.74
CSDE1-210ENST00000525878 AADATQ8N5Z0 425 aa4.2□□□□□ -1.74
CSDE1-210ENST00000525878 MCPH1Q8NEM0 835 aa4.2□□□□□ -1.74
CSDE1-210ENST00000525878 C1QTNF5Q9BXJ0 243 aa4.2□□□□□ -1.74
CSDE1-210ENST00000525878 BRD8Q9H0E9 1235 aa4.2□□□□□ -1.74
CSDE1-210ENST00000525878 ELAC1Q9H777 363 aaKnown RBP4.2□□□□□ -1.74
CSDE1-210ENST00000525878 EBF2Q9HAK2 575 aa4.2□□□□□ -1.74
CSDE1-210ENST00000525878 TMLHEQ9NVH6 421 aa4.2□□□□□ -1.74
CSDE1-210ENST00000525878 NDUFAF4Q9P032 175 aa4.2□□□□□ -1.74
CSDE1-210ENST00000525878 BAG5Q9UL15 447 aa4.2□□□□□ -1.74
CSDE1-210ENST00000525878 FAM157AC9JC47 383 aa4.19□□□□□ -1.74
CSDE1-210ENST00000525878 J3KR12 359 aa4.19□□□□□ -1.74
CSDE1-210ENST00000525878 SYN3O14994 580 aa4.19□□□□□ -1.74
CSDE1-210ENST00000525878 FFAR2O15552 330 aa4.19□□□□□ -1.74
CSDE1-210ENST00000525878 PARNO95453 639 aaKnown RBP4.19□□□□□ -1.74
CSDE1-210ENST00000525878 VNN2O95498 520 aa4.19□□□□□ -1.74
CSDE1-210ENST00000525878 TFRCP02786 760 aaKnown RBP4.19□□□□□ -1.74
CSDE1-210ENST00000525878 SERPINB2P05120 415 aa4.19□□□□□ -1.74
CSDE1-210ENST00000525878 CFC1BP0CG36 223 aa4.19□□□□□ -1.74
CSDE1-210ENST00000525878 CFC1P0CG37 223 aa4.19□□□□□ -1.74
CSDE1-210ENST00000525878 GM2AP17900 193 aa4.19□□□□□ -1.74
CSDE1-210ENST00000525878 PPM1AP35813 382 aa4.19□□□□□ -1.74
CSDE1-210ENST00000525878 RPL3P39023 403 aaKnown RBP4.19□□□□□ -1.74
CSDE1-210ENST00000525878 SKIV2L2P42285 1042 aaKnown RBP4.19□□□□□ -1.74
CSDE1-210ENST00000525878 AP2B1P63010 937 aa4.19□□□□□ -1.74
CSDE1-210ENST00000525878 BTKQ06187 659 aa4.19□□□□□ -1.74
CSDE1-210ENST00000525878 RBBP5Q15291 538 aaKnown RBP4.19□□□□□ -1.74
CSDE1-210ENST00000525878 CCDC181Q5TID7 509 aa4.19□□□□□ -1.74
CSDE1-210ENST00000525878 UNQ6126/PRO20091Q6UXV3 157 aa4.19□□□□□ -1.74
CSDE1-210ENST00000525878 CCDC129Q6ZRS4 1044 aa4.19□□□□□ -1.74
CSDE1-210ENST00000525878 NEK10Q6ZWH5 1172 aa4.19□□□□□ -1.74
CSDE1-210ENST00000525878 MARK2Q7KZI7 788 aaKnown RBP4.19□□□□□ -1.74
CSDE1-210ENST00000525878 CD101Q93033 1021 aa4.19□□□□□ -1.74
CSDE1-210ENST00000525878 EPYCQ99645 322 aa4.19□□□□□ -1.74
CSDE1-210ENST00000525878 DDX23Q9BUQ8 820 aaKnown RBP4.19□□□□□ -1.74
CSDE1-210ENST00000525878 CXorf56Q9H5V9 222 aa4.19□□□□□ -1.74
CSDE1-210ENST00000525878 WDR6Q9NNW5 1121 aaKnown RBP4.19□□□□□ -1.74
CSDE1-210ENST00000525878 GAB2Q9UQC2 676 aa4.19□□□□□ -1.74
CSDE1-210ENST00000525878 MMP24Q9Y5R2 645 aa4.19□□□□□ -1.74
CSDE1-210ENST00000525878 IGHV4OR15-8A0A075B7B6 117 aa4.18□□□□□ -1.74
CSDE1-210ENST00000525878 CPED1A4D0V7 1026 aa4.18□□□□□ -1.74
CSDE1-210ENST00000525878 GAGE7O76087 117 aa4.18□□□□□ -1.74
CSDE1-210ENST00000525878 PMS2P2O95744 297 aa4.18□□□□□ -1.74
CSDE1-210ENST00000525878 GAGE12FP0CL80 117 aa4.18□□□□□ -1.74
CSDE1-210ENST00000525878 GAGE12GP0CL81 117 aa4.18□□□□□ -1.74
CSDE1-210ENST00000525878 GAGE12IP0CL82 117 aa4.18□□□□□ -1.74
CSDE1-210ENST00000525878 MYF6P23409 242 aa4.18□□□□□ -1.74
CSDE1-210ENST00000525878 GJC1P36383 396 aa4.18□□□□□ -1.74
CSDE1-210ENST00000525878 MTNR1AP48039 350 aa4.18□□□□□ -1.74
CSDE1-210ENST00000525878 VEGFCP49767 419 aa4.18□□□□□ -1.74
CSDE1-210ENST00000525878 MVDP53602 400 aa4.18□□□□□ -1.74
CSDE1-210ENST00000525878 GAGE1Q13065 139 aa4.18□□□□□ -1.74
CSDE1-210ENST00000525878 GAGE4Q13068 117 aa4.18□□□□□ -1.74
CSDE1-210ENST00000525878 LPIN1Q14693 890 aa4.18□□□□□ -1.74
CSDE1-210ENST00000525878 RPS6KA2Q15349 733 aa4.18□□□□□ -1.74
CSDE1-210ENST00000525878 RPE65Q16518 533 aa4.18□□□□□ -1.74
CSDE1-210ENST00000525878 LRRC24Q50LG9 513 aa4.18□□□□□ -1.74
CSDE1-210ENST00000525878 DCAF6Q58WW2 860 aa4.18□□□□□ -1.74
CSDE1-210ENST00000525878 LIN54Q6MZP7 749 aa4.18□□□□□ -1.74
CSDE1-210ENST00000525878 FOXL2NBQ6ZUU3 175 aa4.18□□□□□ -1.74
CSDE1-210ENST00000525878 OTUD7AQ8TE49 926 aaPredicted RBP4.18□□□□□ -1.74
CSDE1-210ENST00000525878 SECTM1Q8WVN6 248 aa4.18□□□□□ -1.74
CSDE1-210ENST00000525878 ATOH1Q92858 354 aaPredicted RBP4.18□□□□□ -1.74
CSDE1-210ENST00000525878 THAP1Q9NVV9 213 aa4.18□□□□□ -1.74
CSDE1-210ENST00000525878 LRFN1Q9P244 771 aa4.18□□□□□ -1.74
CSDE1-210ENST00000525878 CDC23Q9UJX2 597 aa4.18□□□□□ -1.74
CSDE1-210ENST00000525878 DHDHQ9UQ10 334 aa4.18□□□□□ -1.74
CSDE1-210ENST00000525878 CLDN16Q9Y5I7 305 aa4.18□□□□□ -1.74
CSDE1-210ENST00000525878 OR6C68A6NDL8 312 aa4.17□□□□□ -1.74
CSDE1-210ENST00000525878 SYT5O00445 386 aa4.17□□□□□ -1.74
CSDE1-210ENST00000525878 SSTR2P30874 369 aa4.17□□□□□ -1.74
CSDE1-210ENST00000525878 GNALP38405 381 aa4.17□□□□□ -1.74
CSDE1-210ENST00000525878 GALNT1Q10472 559 aaPredicted RBP4.17□□□□□ -1.74
CSDE1-210ENST00000525878 CALCRLQ16602 461 aa4.17□□□□□ -1.74
CSDE1-210ENST00000525878 IL31Q6EBC2 164 aa4.17□□□□□ -1.74
CSDE1-210ENST00000525878 KSR2Q6VAB6 950 aa4.17□□□□□ -1.74
CSDE1-210ENST00000525878 SRLQ86TD4 932 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms