RNA–Protein interactions for RNA: ENST00000525276.1

CTTN-209, Transcript of cortactin, humanhuman

TSL 3

Gene CTTN, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-209ENST00000525276 FAM46CQ5VWP2 391 aa11.66□□□□□ -0.54
CTTN-209ENST00000525276 C22orf39Q6P5X5 142 aa11.66□□□□□ -0.54
CTTN-209ENST00000525276 USP30Q70CQ3 517 aa11.66□□□□□ -0.54
CTTN-209ENST00000525276 FAM124AQ86V42 546 aa11.66□□□□□ -0.54
CTTN-209ENST00000525276 ZNF354CQ86Y25 554 aa11.66□□□□□ -0.54
CTTN-209ENST00000525276 RHOT2Q8IXI1 618 aa11.66□□□□□ -0.54
CTTN-209ENST00000525276 CCDC170Q8IYT3 715 aa11.66□□□□□ -0.54
CTTN-209ENST00000525276 RGL4Q8IZJ4 473 aa11.66□□□□□ -0.54
CTTN-209ENST00000525276 ZCCHC9Q8N567 271 aaKnown RBP11.66□□□□□ -0.54
CTTN-209ENST00000525276 CADM4Q8NFZ8 388 aa11.66□□□□□ -0.54
CTTN-209ENST00000525276 HSPH1Q92598 858 aa11.66□□□□□ -0.54
CTTN-209ENST00000525276 FOXJ1Q92949 421 aa11.66□□□□□ -0.54
CTTN-209ENST00000525276 GPR174Q9BXC1 333 aa11.66□□□□□ -0.54
CTTN-209ENST00000525276 PCED1AQ9H1Q7 454 aa11.66□□□□□ -0.54
CTTN-209ENST00000525276 NOL6Q9H6R4 1146 aaKnown RBP11.66□□□□□ -0.54
CTTN-209ENST00000525276 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.66□□□□□ -0.54
CTTN-209ENST00000525276 FBXL12Q9NXK8 326 aa11.66□□□□□ -0.54
CTTN-209ENST00000525276 BTBD3Q9Y2F9 522 aa11.66□□□□□ -0.54
CTTN-209ENST00000525276 PCDHB9Q9Y5E1 797 aa11.66□□□□□ -0.54
CTTN-209ENST00000525276 SHROOM3Q8TF72 1996 aa11.65□□□□□ -0.54
CTTN-209ENST00000525276 A0A087WV48 116 aa11.65□□□□□ -0.54
CTTN-209ENST00000525276 A0A1B0GTW7 788 aa11.65□□□□□ -0.54
CTTN-209ENST00000525276 TMEM110-MUSTN1A8MSY1 372 aa11.65□□□□□ -0.54
CTTN-209ENST00000525276 RASA4BC9J798 803 aa11.65□□□□□ -0.54
CTTN-209ENST00000525276 C1QTNF3-AMACRE9PGA6 284 aa11.65□□□□□ -0.54
CTTN-209ENST00000525276 MCF2LO15068 1137 aa11.65□□□□□ -0.54
CTTN-209ENST00000525276 RASA4O43374 803 aa11.65□□□□□ -0.54
CTTN-209ENST00000525276 KDELR3O43731 214 aa11.65□□□□□ -0.54
CTTN-209ENST00000525276 MTA2O94776 668 aa11.65□□□□□ -0.54
CTTN-209ENST00000525276 PRB1P04280 392 aa11.65□□□□□ -0.54
CTTN-209ENST00000525276 ERCC2P18074 760 aa11.65□□□□□ -0.54
CTTN-209ENST00000525276 CDC25BP30305 580 aa11.65□□□□□ -0.54
CTTN-209ENST00000525276 MAN1A1P33908 653 aa11.65□□□□□ -0.54
CTTN-209ENST00000525276 CYLC1P35663 651 aaPredicted RBP11.65□□□□□ -0.54
CTTN-209ENST00000525276 RECQLP46063 649 aaPredicted RBP11.65□□□□□ -0.54
CTTN-209ENST00000525276 SLC25A11Q02978 314 aaKnown RBP11.65□□□□□ -0.54
CTTN-209ENST00000525276 SPA17Q15506 151 aa11.65□□□□□ -0.54
CTTN-209ENST00000525276 SYCP2LQ5T4T6 812 aa11.65□□□□□ -0.54
CTTN-209ENST00000525276 TMTC1Q8IUR5 882 aa11.65□□□□□ -0.54
CTTN-209ENST00000525276 PCDH20Q8N6Y1 951 aaKnown RBP11.65□□□□□ -0.54
CTTN-209ENST00000525276 SLC35G2Q8TBE7 412 aa11.65□□□□□ -0.54
CTTN-209ENST00000525276 RFFLQ8WZ73 363 aa11.65□□□□□ -0.54
CTTN-209ENST00000525276 HMCESQ96FZ2 354 aa11.65□□□□□ -0.54
CTTN-209ENST00000525276 OMDQ99983 421 aa11.65□□□□□ -0.54
CTTN-209ENST00000525276 ZDHHC5Q9C0B5 715 aa11.65□□□□□ -0.54
CTTN-209ENST00000525276 BTBD1Q9H0C5 482 aa11.65□□□□□ -0.54
CTTN-209ENST00000525276 TNKS2Q9H2K2 1166 aa11.65□□□□□ -0.54
CTTN-209ENST00000525276 GAREM1Q9H706 876 aa11.65□□□□□ -0.54
CTTN-209ENST00000525276 SGK2Q9HBY8 427 aa11.65□□□□□ -0.54
CTTN-209ENST00000525276 OSGEPQ9NPF4 335 aa11.65□□□□□ -0.54
CTTN-209ENST00000525276 LUC7LQ9NQ29 371 aaKnown RBP11.65□□□□□ -0.54
CTTN-209ENST00000525276 CWC15Q9P013 229 aaKnown RBP11.65□□□□□ -0.54
CTTN-209ENST00000525276 SUSD2Q9UGT4 822 aa11.65□□□□□ -0.54
CTTN-209ENST00000525276 PPM1HQ9ULR3 514 aa11.65□□□□□ -0.54
CTTN-209ENST00000525276 FZD4Q9ULV1 537 aa11.65□□□□□ -0.54
CTTN-209ENST00000525276 APOBEC2Q9Y235 224 aaKnown RBP11.65□□□□□ -0.54
CTTN-209ENST00000525276 A0A1W2PP55 124 aa11.64□□□□□ -0.55
CTTN-209ENST00000525276 ARHGAP42A6NI28 874 aa11.64□□□□□ -0.55
CTTN-209ENST00000525276 MEI4A8MW99 385 aa11.64□□□□□ -0.55
CTTN-209ENST00000525276 BUB1O43683 1085 aa11.64□□□□□ -0.55
CTTN-209ENST00000525276 RNASEH2AO75792 299 aaKnown RBP11.64□□□□□ -0.55
CTTN-209ENST00000525276 LCA5LO95447 670 aa11.64□□□□□ -0.55
CTTN-209ENST00000525276 SEMA4FO95754 770 aa11.64□□□□□ -0.55
CTTN-209ENST00000525276 CD160O95971 181 aa11.64□□□□□ -0.55
CTTN-209ENST00000525276 KRT7P08729 469 aa11.64□□□□□ -0.55
CTTN-209ENST00000525276 FECHP22830 423 aa11.64□□□□□ -0.55
CTTN-209ENST00000525276 CHRNA3P32297 505 aa11.64□□□□□ -0.55
CTTN-209ENST00000525276 ACSL1P33121 698 aa11.64□□□□□ -0.55
CTTN-209ENST00000525276 ARHGAP25P42331 645 aa11.64□□□□□ -0.55
CTTN-209ENST00000525276 MAGEA1P43355 309 aa11.64□□□□□ -0.55
CTTN-209ENST00000525276 DNA2P51530 1060 aa11.64□□□□□ -0.55
CTTN-209ENST00000525276 CYP4F3Q08477 520 aa11.64□□□□□ -0.55
CTTN-209ENST00000525276 SERINC3Q13530 473 aa11.64□□□□□ -0.55
CTTN-209ENST00000525276 DPYSQ14117 519 aa11.64□□□□□ -0.55
CTTN-209ENST00000525276 KRT81Q14533 505 aa11.64□□□□□ -0.55
CTTN-209ENST00000525276 MESDQ14696 234 aa11.64□□□□□ -0.55
CTTN-209ENST00000525276 HLA-BQ31612 363 aa11.64□□□□□ -0.55
CTTN-209ENST00000525276 WDR45BQ5MNZ6 344 aa11.64□□□□□ -0.55
CTTN-209ENST00000525276 TXNRD3NBQ6F5E7 133 aa11.64□□□□□ -0.55
CTTN-209ENST00000525276 POLNQ7Z5Q5 900 aa11.64□□□□□ -0.55
CTTN-209ENST00000525276 LZTR1Q8N653 840 aa11.64□□□□□ -0.55
CTTN-209ENST00000525276 OR2A12Q8NGT7 310 aa11.64□□□□□ -0.55
CTTN-209ENST00000525276 PIP4K2CQ8TBX8 421 aa11.64□□□□□ -0.55
CTTN-209ENST00000525276 CASKIN2Q8WXE0 1202 aa11.64□□□□□ -0.55
CTTN-209ENST00000525276 ISG20Q96AZ6 181 aaKnown RBP11.64□□□□□ -0.55
CTTN-209ENST00000525276 CSPG4P5Q96PW8 444 aa11.64□□□□□ -0.55
CTTN-209ENST00000525276 LRRC19Q9H756 370 aa11.64□□□□□ -0.55
CTTN-209ENST00000525276 PCDH18Q9HCL0 1135 aa11.64□□□□□ -0.55
CTTN-209ENST00000525276 TM7SF3Q9NS93 570 aa11.64□□□□□ -0.55
CTTN-209ENST00000525276 IMPACTQ9P2X3 320 aa11.64□□□□□ -0.55
CTTN-209ENST00000525276 FCF1Q9Y324 198 aaKnown RBP11.64□□□□□ -0.55
CTTN-209ENST00000525276 ACTL7AQ9Y615 435 aa11.64□□□□□ -0.55
CTTN-209ENST00000525276 FAM149AA5PLN7 773 aa11.63□□□□□ -0.55
CTTN-209ENST00000525276 TRABD2BA6NFA1 517 aa11.63□□□□□ -0.55
CTTN-209ENST00000525276 METTL12A8MUP2 240 aa11.63□□□□□ -0.55
CTTN-209ENST00000525276 GOLGA6L6A8MZA4 724 aa11.63□□□□□ -0.55
CTTN-209ENST00000525276 BCAT2O15382 392 aaPredicted RBP11.63□□□□□ -0.55
CTTN-209ENST00000525276 ZNF821O75541 412 aaPredicted RBP11.63□□□□□ -0.55
CTTN-209ENST00000525276 IPO7O95373 1038 aaKnown RBP11.63□□□□□ -0.55
CTTN-209ENST00000525276 PRNPP04156 253 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms