RNA–Protein interactions for RNA: ENST00000525013.1

CAPN1-203, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-203ENST00000525013 IQCHQ86VS3 1027 aa18.87■□□□□ 0.61
CAPN1-203ENST00000525013 PLPP6Q8IY26 295 aa18.87■□□□□ 0.61
CAPN1-203ENST00000525013 OR2AP1Q8NGE2 309 aa18.87■□□□□ 0.61
CAPN1-203ENST00000525013 CPLX3Q8WVH0 158 aa18.87■□□□□ 0.61
CAPN1-203ENST00000525013 ADAMTS14Q8WXS8 1223 aa18.87■□□□□ 0.61
CAPN1-203ENST00000525013 HMCESQ96FZ2 354 aa18.87■□□□□ 0.61
CAPN1-203ENST00000525013 KLHDC7BQ96G42 594 aa18.87■□□□□ 0.61
CAPN1-203ENST00000525013 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.87■□□□□ 0.61
CAPN1-203ENST00000525013 TRIM7Q9C029 511 aa18.87■□□□□ 0.61
CAPN1-203ENST00000525013 FZD3Q9NPG1 666 aa18.87■□□□□ 0.61
CAPN1-203ENST00000525013 TMEM191CA6NGB0 347 aa18.86■□□□□ 0.61
CAPN1-203ENST00000525013 YKT6O15498 198 aa18.86■□□□□ 0.61
CAPN1-203ENST00000525013 FGF10O15520 208 aaPredicted RBP18.86■□□□□ 0.61
CAPN1-203ENST00000525013 TMCC1O94876 653 aa18.86■□□□□ 0.61
CAPN1-203ENST00000525013 POP4O95707 220 aaKnown RBP18.86■□□□□ 0.61
CAPN1-203ENST00000525013 PROS1P07225 676 aa18.86■□□□□ 0.61
CAPN1-203ENST00000525013 ADRB3P13945 408 aa18.86■□□□□ 0.61
CAPN1-203ENST00000525013 AKT2P31751 481 aa18.86■□□□□ 0.61
CAPN1-203ENST00000525013 OVGP1Q12889 678 aa18.86■□□□□ 0.61
CAPN1-203ENST00000525013 MAPK8IP2Q13387 824 aaPredicted RBP18.86■□□□□ 0.61
CAPN1-203ENST00000525013 MYLK3Q32MK0 819 aa18.86■□□□□ 0.61
CAPN1-203ENST00000525013 PARP15Q460N3 678 aa18.86■□□□□ 0.61
CAPN1-203ENST00000525013 SEL1L3Q68CR1 1132 aa18.86■□□□□ 0.61
CAPN1-203ENST00000525013 SPATS2Q86XZ4 545 aaKnown RBP18.86■□□□□ 0.61
CAPN1-203ENST00000525013 OXR1Q8N573 874 aa18.86■□□□□ 0.61
CAPN1-203ENST00000525013 NETO2Q8NC67 525 aa18.86■□□□□ 0.61
CAPN1-203ENST00000525013 TRIM11Q96F44 468 aa18.86■□□□□ 0.61
CAPN1-203ENST00000525013 KLC2Q9H0B6 622 aa18.86■□□□□ 0.61
CAPN1-203ENST00000525013 ERVMER34-1Q9H9K5 563 aa18.86■□□□□ 0.61
CAPN1-203ENST00000525013 DONSONQ9NYP3 566 aa18.86■□□□□ 0.61
CAPN1-203ENST00000525013 FTSJ1Q9UET6 329 aa18.86■□□□□ 0.61
CAPN1-203ENST00000525013 MSRB2Q9Y3D2 182 aa18.86■□□□□ 0.61
CAPN1-203ENST00000525013 SCINQ9Y6U3 715 aa18.86■□□□□ 0.61
CAPN1-203ENST00000525013 C16orf96A6NNT2 1141 aa18.85■□□□□ 0.61
CAPN1-203ENST00000525013 WASH4PA8MWX3 477 aa18.85■□□□□ 0.61
CAPN1-203ENST00000525013 EEF2KO00418 725 aaKnown RBP18.85■□□□□ 0.61
CAPN1-203ENST00000525013 NEMP1O14524 444 aa18.85■□□□□ 0.61
CAPN1-203ENST00000525013 DAPK3O43293 454 aa18.85■□□□□ 0.61
CAPN1-203ENST00000525013 TNFSF14O43557 240 aa18.85■□□□□ 0.61
CAPN1-203ENST00000525013 PRPSAP2O60256 369 aa18.85■□□□□ 0.61
CAPN1-203ENST00000525013 UGT2B4P06133 528 aa18.85■□□□□ 0.61
CAPN1-203ENST00000525013 MYBL1P10243 752 aa18.85■□□□□ 0.61
CAPN1-203ENST00000525013 HTR7P34969 479 aa18.85■□□□□ 0.61
CAPN1-203ENST00000525013 RAD51Q06609 339 aa18.85■□□□□ 0.61
CAPN1-203ENST00000525013 SERINC3Q13530 473 aa18.85■□□□□ 0.61
CAPN1-203ENST00000525013 SHBQ15464 509 aa18.85■□□□□ 0.61
CAPN1-203ENST00000525013 CA9Q16790 459 aa18.85■□□□□ 0.61
CAPN1-203ENST00000525013 ZSCAN23Q3MJ62 389 aa18.85■□□□□ 0.61
CAPN1-203ENST00000525013 ZNF805Q5CZA5 627 aa18.85■□□□□ 0.61
CAPN1-203ENST00000525013 ERMARDQ5T6L9 678 aa18.85■□□□□ 0.61
CAPN1-203ENST00000525013 PARS2Q7L3T8 475 aaKnown RBP18.85■□□□□ 0.61
CAPN1-203ENST00000525013 UMODL1-AS1Q8N2C9 162 aa18.85■□□□□ 0.61
CAPN1-203ENST00000525013 ARFGAP1Q8N6T3 406 aa18.85■□□□□ 0.61
CAPN1-203ENST00000525013 SAP25Q8TEE9 199 aa18.85■□□□□ 0.61
CAPN1-203ENST00000525013 GATA6Q92908 595 aa18.85■□□□□ 0.61
CAPN1-203ENST00000525013 LRIG1Q96JA1 1093 aa18.85■□□□□ 0.61
CAPN1-203ENST00000525013 FEM1CQ96JP0 617 aa18.85■□□□□ 0.61
CAPN1-203ENST00000525013 GDAP1L1Q96MZ0 367 aa18.85■□□□□ 0.61
CAPN1-203ENST00000525013 MRPL47Q9HD33 250 aaKnown RBP18.85■□□□□ 0.61
CAPN1-203ENST00000525013 ZFR2Q9UPR6 939 aaKnown RBP18.85■□□□□ 0.61
CAPN1-203ENST00000525013 FADS3Q9Y5Q0 445 aa18.85■□□□□ 0.61
CAPN1-203ENST00000525013 BZW2Q9Y6E2 419 aaKnown RBP18.85■□□□□ 0.61
CAPN1-203ENST00000525013 SPEGQ15772 3267 aa18.84■□□□□ 0.61
CAPN1-203ENST00000525013 A0A1W2PQJ5 194 aa18.84■□□□□ 0.61
CAPN1-203ENST00000525013 THEGLP0DJG4 465 aa18.84■□□□□ 0.61
CAPN1-203ENST00000525013 HNRNPA2B1P22626 353 aaKnown RBP18.84■□□□□ 0.61
CAPN1-203ENST00000525013 EPHA8P29322 1005 aaPredicted RBP18.84■□□□□ 0.61
CAPN1-203ENST00000525013 MIPP30301 263 aa18.84■□□□□ 0.61
CAPN1-203ENST00000525013 PBX1P40424 430 aa18.84■□□□□ 0.61
CAPN1-203ENST00000525013 RHOAP61586 193 aa18.84■□□□□ 0.61
CAPN1-203ENST00000525013 RPS21P63220 83 aaKnown RBP18.84■□□□□ 0.61
CAPN1-203ENST00000525013 BNIP3Q12983 259 aa18.84■□□□□ 0.61
CAPN1-203ENST00000525013 INO80DQ53TQ3 878 aaPredicted RBP18.84■□□□□ 0.61
CAPN1-203ENST00000525013 PPP6R3Q5H9R7 873 aaPredicted RBP18.84■□□□□ 0.61
CAPN1-203ENST00000525013 KIAA1161Q6NSJ0 714 aa18.84■□□□□ 0.61
CAPN1-203ENST00000525013 VPS36Q86VN1 386 aa18.84■□□□□ 0.61
CAPN1-203ENST00000525013 EID2Q8N6I1 236 aa18.84■□□□□ 0.61
CAPN1-203ENST00000525013 TMEM145Q8NBT3 493 aa18.84■□□□□ 0.61
CAPN1-203ENST00000525013 FNIP1Q8TF40 1166 aa18.84■□□□□ 0.61
CAPN1-203ENST00000525013 CASKIN2Q8WXE0 1202 aa18.84■□□□□ 0.61
CAPN1-203ENST00000525013 CELF6Q96J87 481 aaKnown RBP18.84■□□□□ 0.61
CAPN1-203ENST00000525013 KLHL32Q96NJ5 620 aa18.84■□□□□ 0.61
CAPN1-203ENST00000525013 PEBP4Q96S96 227 aa18.84■□□□□ 0.61
CAPN1-203ENST00000525013 SNRNP25Q9BV90 132 aaKnown RBP18.84■□□□□ 0.61
CAPN1-203ENST00000525013 OSBPL1AQ9BXW6 950 aa18.84■□□□□ 0.61
CAPN1-203ENST00000525013 IFNKQ9P0W0 207 aa18.84■□□□□ 0.61
CAPN1-203ENST00000525013 PLXNB3Q9ULL4 1909 aa18.84■□□□□ 0.61
CAPN1-203ENST00000525013 EIF3CLB5ME19 914 aaKnown RBP18.83■□□□□ 0.6
CAPN1-203ENST00000525013 AP1G1O43747 822 aa18.83■□□□□ 0.6
CAPN1-203ENST00000525013 IGSF6O95976 241 aa18.83■□□□□ 0.6
CAPN1-203ENST00000525013 RXRGP48443 463 aa18.83■□□□□ 0.6
CAPN1-203ENST00000525013 CLDN2P57739 230 aa18.83■□□□□ 0.6
CAPN1-203ENST00000525013 ZBED6P86452 979 aa18.83■□□□□ 0.6
CAPN1-203ENST00000525013 TMEM259Q4ZIN3 620 aa18.83■□□□□ 0.6
CAPN1-203ENST00000525013 HGSNATQ68CP4 663 aa18.83■□□□□ 0.6
CAPN1-203ENST00000525013 GDPD4Q6W3E5 623 aa18.83■□□□□ 0.6
CAPN1-203ENST00000525013 SYN2Q92777 582 aaPredicted RBP18.83■□□□□ 0.6
CAPN1-203ENST00000525013 RAB7BQ96AH8 199 aa18.83■□□□□ 0.6
CAPN1-203ENST00000525013 KCTD15Q96SI1 283 aaPredicted RBP18.83■□□□□ 0.6
CAPN1-203ENST00000525013 EIF3CQ99613 913 aaKnown RBP18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms