RNA–Protein interactions for RNA: ENST00000524895.5

TSPAN4-213, Transcript of tetraspanin 4, humanhuman

TSL 4

Gene TSPAN4, Length 401 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-213ENST00000524895 MYRIPQ8NFW9 859 aa16.06■□□□□ 0.16
TSPAN4-213ENST00000524895 OR2AP1Q8NGE2 309 aa16.06■□□□□ 0.16
TSPAN4-213ENST00000524895 RUBCNQ92622 972 aa16.06■□□□□ 0.16
TSPAN4-213ENST00000524895 IMP4Q96G21 291 aaKnown RBP16.06■□□□□ 0.16
TSPAN4-213ENST00000524895 MYO19Q96H55 970 aa16.06■□□□□ 0.16
TSPAN4-213ENST00000524895 NUDCD1Q96RS6 583 aa16.06■□□□□ 0.16
TSPAN4-213ENST00000524895 RBM15Q96T37 977 aaKnown RBP eCLIP16.06■□□□□ 0.16
TSPAN4-213ENST00000524895 EPC1Q9H2F5 836 aa16.06■□□□□ 0.16
TSPAN4-213ENST00000524895 ANKZF1Q9H8Y5 726 aa16.06■□□□□ 0.16
TSPAN4-213ENST00000524895 FAM114A2Q9NRY5 505 aa16.06■□□□□ 0.16
TSPAN4-213ENST00000524895 WHRNQ9P202 907 aa16.06■□□□□ 0.16
TSPAN4-213ENST00000524895 THAP10Q9P2Z0 257 aaPredicted RBP16.06■□□□□ 0.16
TSPAN4-213ENST00000524895 WNT16Q9UBV4 365 aa16.06■□□□□ 0.16
TSPAN4-213ENST00000524895 AAR2Q9Y312 384 aaKnown RBP16.06■□□□□ 0.16
TSPAN4-213ENST00000524895 TTC24A2A3L6 582 aaPredicted RBP16.05■□□□□ 0.16
TSPAN4-213ENST00000524895 NPC1O15118 1278 aa16.05■□□□□ 0.16
TSPAN4-213ENST00000524895 INSIG1O15503 277 aa16.05■□□□□ 0.16
TSPAN4-213ENST00000524895 ZNF821O75541 412 aaPredicted RBP16.05■□□□□ 0.16
TSPAN4-213ENST00000524895 GJB3O75712 270 aa16.05■□□□□ 0.16
TSPAN4-213ENST00000524895 APRTP07741 180 aa16.05■□□□□ 0.16
TSPAN4-213ENST00000524895 SERPINF2P08697 491 aa16.05■□□□□ 0.16
TSPAN4-213ENST00000524895 ITIH2P19823 946 aa16.05■□□□□ 0.16
TSPAN4-213ENST00000524895 IVDP26440 423 aa16.05■□□□□ 0.16
TSPAN4-213ENST00000524895 MAPK8P45983 427 aa16.05■□□□□ 0.16
TSPAN4-213ENST00000524895 DRG2P55039 364 aaKnown RBP16.05■□□□□ 0.16
TSPAN4-213ENST00000524895 GEMP55040 296 aa16.05■□□□□ 0.16
TSPAN4-213ENST00000524895 AP1S1P61966 158 aa16.05■□□□□ 0.16
TSPAN4-213ENST00000524895 NIPAL4Q0D2K0 466 aa16.05■□□□□ 0.16
TSPAN4-213ENST00000524895 CARD16Q5EG05 197 aa16.05■□□□□ 0.16
TSPAN4-213ENST00000524895 RALGPS1Q5JS13 557 aa16.05■□□□□ 0.16
TSPAN4-213ENST00000524895 SYCP2LQ5T4T6 812 aa16.05■□□□□ 0.16
TSPAN4-213ENST00000524895 SRLQ86TD4 932 aa16.05■□□□□ 0.16
TSPAN4-213ENST00000524895 PPIL6Q8IXY8 311 aa16.05■□□□□ 0.16
TSPAN4-213ENST00000524895 CHPFQ8IZ52 775 aa16.05■□□□□ 0.16
TSPAN4-213ENST00000524895 SPATA22Q8NHS9 363 aa16.05■□□□□ 0.16
TSPAN4-213ENST00000524895 ARRDC2Q8TBH0 407 aa16.05■□□□□ 0.16
TSPAN4-213ENST00000524895 FRS2Q8WU20 508 aa16.05■□□□□ 0.16
TSPAN4-213ENST00000524895 IFT81Q8WYA0 676 aa16.05■□□□□ 0.16
TSPAN4-213ENST00000524895 SEC14L1Q92503 715 aa16.05■□□□□ 0.16
TSPAN4-213ENST00000524895 CPT1BQ92523 772 aa16.05■□□□□ 0.16
TSPAN4-213ENST00000524895 EZH1Q92800 747 aaPredicted RBP16.05■□□□□ 0.16
TSPAN4-213ENST00000524895 OXNAD1Q96HP4 312 aaPredicted RBP16.05■□□□□ 0.16
TSPAN4-213ENST00000524895 SHDQ96IW2 340 aa16.05■□□□□ 0.16
TSPAN4-213ENST00000524895 GORASP1Q9BQQ3 440 aa16.05■□□□□ 0.16
TSPAN4-213ENST00000524895 NOD2Q9HC29 1040 aa16.05■□□□□ 0.16
TSPAN4-213ENST00000524895 ZDHHC4Q9NPG8 344 aa16.05■□□□□ 0.16
TSPAN4-213ENST00000524895 UBP1Q9NZI7 540 aa16.05■□□□□ 0.16
TSPAN4-213ENST00000524895 MUTYHQ9UIF7 546 aa16.05■□□□□ 0.16
TSPAN4-213ENST00000524895 ANAPC5Q9UJX4 755 aa16.05■□□□□ 0.16
TSPAN4-213ENST00000524895 NDRG2Q9UN36 371 aaKnown RBP16.05■□□□□ 0.16
TSPAN4-213ENST00000524895 MYO10Q9HD67 2058 aa16.04■□□□□ 0.16
TSPAN4-213ENST00000524895 EDDM13A0A1B0GTR0 161 aa16.04■□□□□ 0.16
TSPAN4-213ENST00000524895 ERI2A8K979 691 aaKnown RBP16.04■□□□□ 0.16
TSPAN4-213ENST00000524895 BHMG1C9JSJ3 638 aaPredicted RBP16.04■□□□□ 0.16
TSPAN4-213ENST00000524895 PMPCBO75439 489 aa16.04■□□□□ 0.16
TSPAN4-213ENST00000524895 MT-CYBP00156 380 aaPredicted RBP16.04■□□□□ 0.16
TSPAN4-213ENST00000524895 HLA-EP13747 358 aa16.04■□□□□ 0.16
TSPAN4-213ENST00000524895 HNRNPLP14866 589 aaKnown RBP eCLIP16.04■□□□□ 0.165e-7■□□□□ 11.2
TSPAN4-213ENST00000524895 CR2P20023 1033 aa16.04■□□□□ 0.16
TSPAN4-213ENST00000524895 TPSB2P20231 275 aa16.04■□□□□ 0.16
TSPAN4-213ENST00000524895 CD72P21854 359 aa16.04■□□□□ 0.16
TSPAN4-213ENST00000524895 TIE1P35590 1138 aa16.04■□□□□ 0.16
TSPAN4-213ENST00000524895 IL12RB1P42701 662 aa16.04■□□□□ 0.16
TSPAN4-213ENST00000524895 KIR2DL1P43626 348 aaPredicted RBP16.04■□□□□ 0.16
TSPAN4-213ENST00000524895 CSNK1DP48730 415 aa16.04■□□□□ 0.16
TSPAN4-213ENST00000524895 CCNHP51946 323 aaPredicted RBP16.04■□□□□ 0.16
TSPAN4-213ENST00000524895 ITGA8P53708 1063 aa16.04■□□□□ 0.16
TSPAN4-213ENST00000524895 MPP3Q13368 585 aa16.04■□□□□ 0.16
TSPAN4-213ENST00000524895 CUL1Q13616 776 aa16.04■□□□□ 0.16
TSPAN4-213ENST00000524895 HLTFQ14527 1009 aaKnown RBP eCLIP16.04■□□□□ 0.16
TSPAN4-213ENST00000524895 KCNJ11Q14654 390 aa16.04■□□□□ 0.16
TSPAN4-213ENST00000524895 MORF4L2Q15014 288 aa16.04■□□□□ 0.16
TSPAN4-213ENST00000524895 TPSAB1Q15661 275 aa16.04■□□□□ 0.16
TSPAN4-213ENST00000524895 ELF2Q15723 593 aa16.04■□□□□ 0.16
TSPAN4-213ENST00000524895 HNRNPA1L2Q32P51 320 aaKnown RBP16.04■□□□□ 0.16
TSPAN4-213ENST00000524895 FBXO43Q4G163 708 aa16.04■□□□□ 0.16
TSPAN4-213ENST00000524895 RNASEH2BQ5TBB1 312 aaKnown RBP16.04■□□□□ 0.16
TSPAN4-213ENST00000524895 EMC10Q5UCC4 262 aa16.04■□□□□ 0.16
TSPAN4-213ENST00000524895 TRMT11Q7Z4G4 463 aaKnown RBP16.04■□□□□ 0.16
TSPAN4-213ENST00000524895 PRPF39Q86UA1 669 aaKnown RBP16.04■□□□□ 0.16
TSPAN4-213ENST00000524895 HOOK3Q86VS8 718 aa16.04■□□□□ 0.16
TSPAN4-213ENST00000524895 GPR161Q8N6U8 529 aaKnown RBP16.04■□□□□ 0.16
TSPAN4-213ENST00000524895 ZNF366Q8N895 744 aa16.04■□□□□ 0.16
TSPAN4-213ENST00000524895 PDCD7Q8N8D1 485 aaKnown RBP16.04■□□□□ 0.16
TSPAN4-213ENST00000524895 IPMKQ8NFU5 416 aa16.04■□□□□ 0.16
TSPAN4-213ENST00000524895 OR6K2Q8NGY2 324 aa16.04■□□□□ 0.16
TSPAN4-213ENST00000524895 KCNV2Q8TDN2 545 aa16.04■□□□□ 0.16
TSPAN4-213ENST00000524895 MLPHQ9BV36 600 aaPredicted RBP16.04■□□□□ 0.16
TSPAN4-213ENST00000524895 FSD1LQ9BXM9 530 aa16.04■□□□□ 0.16
TSPAN4-213ENST00000524895 TMEM245Q9H330 911 aa16.04■□□□□ 0.16
TSPAN4-213ENST00000524895 LRRC40Q9H9A6 602 aa16.04■□□□□ 0.16
TSPAN4-213ENST00000524895 GDF3Q9NR23 364 aa16.04■□□□□ 0.16
TSPAN4-213ENST00000524895 EIF2B3Q9NR50 452 aaKnown RBP16.04■□□□□ 0.16
TSPAN4-213ENST00000524895 VPS45Q9NRW7 570 aa16.04■□□□□ 0.16
TSPAN4-213ENST00000524895 CACNA2D2Q9NY47 1150 aa16.04■□□□□ 0.16
TSPAN4-213ENST00000524895 GRHL1Q9NZI5 618 aa16.04■□□□□ 0.16
TSPAN4-213ENST00000524895 HECAQ9UBI9 543 aaPredicted RBP16.04■□□□□ 0.16
TSPAN4-213ENST00000524895 FAM153AQ9UHL3 310 aa16.04■□□□□ 0.16
TSPAN4-213ENST00000524895 HCN2Q9UL51 889 aa16.04■□□□□ 0.16
TSPAN4-213ENST00000524895 SHOC2Q9UQ13 582 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms