RNA–Protein interactions for RNA: ENST00000523873.5

VEGFA-224, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 784 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-224ENST00000523873 PGBD5Q8N414 524 aa13.02□□□□□ -0.33
VEGFA-224ENST00000523873 CASKIN2Q8WXE0 1202 aa13.02□□□□□ -0.33
VEGFA-224ENST00000523873 NSMCE3Q96MG7 304 aa13.02□□□□□ -0.33
VEGFA-224ENST00000523873 GDAP1L1Q96MZ0 367 aa13.02□□□□□ -0.33
VEGFA-224ENST00000523873 LGMNQ99538 433 aa13.02□□□□□ -0.33
VEGFA-224ENST00000523873 OMDQ99983 421 aa13.02□□□□□ -0.33
VEGFA-224ENST00000523873 RAB23Q9ULC3 237 aa13.02□□□□□ -0.33
VEGFA-224ENST00000523873 PYCARDQ9ULZ3 195 aa13.02□□□□□ -0.33
VEGFA-224ENST00000523873 FARP1Q9Y4F1 1045 aaPredicted RBP13.02□□□□□ -0.33
VEGFA-224ENST00000523873 ATXN2Q99700 1313 aaKnown RBP13.02□□□□□ -0.33
VEGFA-224ENST00000523873 USP34Q70CQ2 3546 aa13.01□□□□□ -0.33
VEGFA-224ENST00000523873 PRR23AA6NEV1 266 aa13.01□□□□□ -0.33
VEGFA-224ENST00000523873 FAM47DPA6NHR8 397 aa13.01□□□□□ -0.33
VEGFA-224ENST00000523873 NDUFS2O75306 463 aa13.01□□□□□ -0.33
VEGFA-224ENST00000523873 IGLV3-19P01714 112 aa13.01□□□□□ -0.33
VEGFA-224ENST00000523873 PRNPP04156 253 aa13.01□□□□□ -0.33
VEGFA-224ENST00000523873 UGT2B4P06133 528 aa13.01□□□□□ -0.33
VEGFA-224ENST00000523873 PTGER3P43115 390 aa13.01□□□□□ -0.33
VEGFA-224ENST00000523873 MAXP61244 160 aa13.01□□□□□ -0.33
VEGFA-224ENST00000523873 ZBTB16Q05516 673 aa13.01□□□□□ -0.33
VEGFA-224ENST00000523873 CCDC173Q0VFZ6 552 aa13.01□□□□□ -0.33
VEGFA-224ENST00000523873 CCDC6Q16204 474 aa13.01□□□□□ -0.33
VEGFA-224ENST00000523873 PPP2R5EQ16537 467 aa13.01□□□□□ -0.33
VEGFA-224ENST00000523873 FAM46CQ5VWP2 391 aa13.01□□□□□ -0.33
VEGFA-224ENST00000523873 SLC36A4Q6YBV0 504 aa13.01□□□□□ -0.33
VEGFA-224ENST00000523873 LPCAT2Q7L5N7 544 aa13.01□□□□□ -0.33
VEGFA-224ENST00000523873 REXO1L1PQ8IX06 675 aa13.01□□□□□ -0.33
VEGFA-224ENST00000523873 DCLK2Q8N568 766 aa13.01□□□□□ -0.33
VEGFA-224ENST00000523873 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.01□□□□□ -0.33
VEGFA-224ENST00000523873 CCNYQ8ND76 341 aa13.01□□□□□ -0.33
VEGFA-224ENST00000523873 TMIEQ8NEW7 156 aa13.01□□□□□ -0.33
VEGFA-224ENST00000523873 HES6Q96HZ4 224 aa13.01□□□□□ -0.33
VEGFA-224ENST00000523873 ZC3H10Q96K80 434 aaKnown RBP13.01□□□□□ -0.33
VEGFA-224ENST00000523873 FAM118BQ9BPY3 351 aa13.01□□□□□ -0.33
VEGFA-224ENST00000523873 CEP41Q9BYV8 373 aa13.01□□□□□ -0.33
VEGFA-224ENST00000523873 C6orf106Q9H6K1 298 aaPredicted RBP13.01□□□□□ -0.33
VEGFA-224ENST00000523873 TRMT1Q9NXH9 659 aaKnown RBP13.01□□□□□ -0.33
VEGFA-224ENST00000523873 NCKAP1Q9Y2A7 1128 aa13.01□□□□□ -0.33
VEGFA-224ENST00000523873 USP27XA6NNY8 438 aa13□□□□□ -0.33
VEGFA-224ENST00000523873 RHOBTB1O94844 696 aa13□□□□□ -0.33
VEGFA-224ENST00000523873 POP4O95707 220 aaKnown RBP13□□□□□ -0.33
VEGFA-224ENST00000523873 SEMA4FO95754 770 aa13□□□□□ -0.33
VEGFA-224ENST00000523873 ZFXP17010 805 aaPredicted RBP13□□□□□ -0.33
VEGFA-224ENST00000523873 OXTRP30559 389 aa13□□□□□ -0.33
VEGFA-224ENST00000523873 MMP13P45452 471 aa13□□□□□ -0.33
VEGFA-224ENST00000523873 AP1B1Q10567 949 aa13□□□□□ -0.33
VEGFA-224ENST00000523873 TFDP2Q14188 446 aa13□□□□□ -0.33
VEGFA-224ENST00000523873 ZNF235Q14590 738 aa13□□□□□ -0.33
VEGFA-224ENST00000523873 RFTN1Q14699 578 aaPredicted RBP13□□□□□ -0.33
VEGFA-224ENST00000523873 ELF2Q15723 593 aa13□□□□□ -0.33
VEGFA-224ENST00000523873 LRRC73Q5JTD7 316 aa13□□□□□ -0.33
VEGFA-224ENST00000523873 AGBL4Q5VU57 503 aa13□□□□□ -0.33
VEGFA-224ENST00000523873 USP30Q70CQ3 517 aa13□□□□□ -0.33
VEGFA-224ENST00000523873 PARS2Q7L3T8 475 aaKnown RBP13□□□□□ -0.33
VEGFA-224ENST00000523873 SRLQ86TD4 932 aa13□□□□□ -0.33
VEGFA-224ENST00000523873 PLPP6Q8IY26 295 aa13□□□□□ -0.33
VEGFA-224ENST00000523873 CCDC13Q8IYE1 715 aa13□□□□□ -0.33
VEGFA-224ENST00000523873 UBL4BQ8N7F7 174 aa13□□□□□ -0.33
VEGFA-224ENST00000523873 HDAC11Q96DB2 347 aa13□□□□□ -0.33
VEGFA-224ENST00000523873 FAM122AQ96E09 287 aa13□□□□□ -0.33
VEGFA-224ENST00000523873 HSPA12BQ96MM6 686 aa13□□□□□ -0.33
VEGFA-224ENST00000523873 KLHL32Q96NJ5 620 aa13□□□□□ -0.33
VEGFA-224ENST00000523873 ZNF599Q96NL3 588 aa13□□□□□ -0.33
VEGFA-224ENST00000523873 OLFM3Q96PB7 478 aa13□□□□□ -0.33
VEGFA-224ENST00000523873 OSBPL8Q9BZF1 889 aa13□□□□□ -0.33
VEGFA-224ENST00000523873 BTBD1Q9H0C5 482 aa13□□□□□ -0.33
VEGFA-224ENST00000523873 ARRDC1-AS1Q9H2J1 176 aa13□□□□□ -0.33
VEGFA-224ENST00000523873 SEMA4AQ9H3S1 761 aa13□□□□□ -0.33
VEGFA-224ENST00000523873 SMOC1Q9H4F8 434 aa13□□□□□ -0.33
VEGFA-224ENST00000523873 NT5MQ9NPB1 228 aa13□□□□□ -0.33
VEGFA-224ENST00000523873 SEPT3Q9UH03 358 aa13□□□□□ -0.33
VEGFA-224ENST00000523873 SCML1Q9UN30 329 aa13□□□□□ -0.33
VEGFA-224ENST00000523873 MIF4GDA9UHW6 222 aaKnown RBP12.99□□□□□ -0.33
VEGFA-224ENST00000523873 KCNK1O00180 336 aa12.99□□□□□ -0.33
VEGFA-224ENST00000523873 GFRA3O60609 400 aa12.99□□□□□ -0.33
VEGFA-224ENST00000523873 EPN2O95208 641 aa12.99□□□□□ -0.33
VEGFA-224ENST00000523873 HLA-DQB2P05538 268 aa12.99□□□□□ -0.33
VEGFA-224ENST00000523873 MX2P20592 715 aa12.99□□□□□ -0.33
VEGFA-224ENST00000523873 TGM2P21980 687 aa12.99□□□□□ -0.33
VEGFA-224ENST00000523873 ITPKAP23677 461 aa12.99□□□□□ -0.33
VEGFA-224ENST00000523873 CCNCP24863 283 aa12.99□□□□□ -0.33
VEGFA-224ENST00000523873 MAOBP27338 520 aa12.99□□□□□ -0.33
VEGFA-224ENST00000523873 PLA2G5P39877 138 aa12.99□□□□□ -0.33
VEGFA-224ENST00000523873 ABL2P42684 1182 aa12.99□□□□□ -0.33
VEGFA-224ENST00000523873 SCNN1BP51168 640 aa12.99□□□□□ -0.33
VEGFA-224ENST00000523873 ADPRHP54922 357 aa12.99□□□□□ -0.33
VEGFA-224ENST00000523873 TAS2R38P59533 333 aa12.99□□□□□ -0.33
VEGFA-224ENST00000523873 CREB5Q02930 508 aa12.99□□□□□ -0.33
VEGFA-224ENST00000523873 ZNF33AQ06730 810 aa12.99□□□□□ -0.33
VEGFA-224ENST00000523873 PPIDQ08752 370 aaKnown RBP12.99□□□□□ -0.33
VEGFA-224ENST00000523873 ZBTB17Q13105 803 aa12.99□□□□□ -0.33
VEGFA-224ENST00000523873 PIP5KL1Q5T9C9 394 aa12.99□□□□□ -0.33
VEGFA-224ENST00000523873 MEI1Q5TIA1 1274 aa12.99□□□□□ -0.33
VEGFA-224ENST00000523873 MARC1Q5VT66 337 aa12.99□□□□□ -0.33
VEGFA-224ENST00000523873 LAIR1Q6GTX8 287 aa12.99□□□□□ -0.33
VEGFA-224ENST00000523873 TIGD7Q6NT04 549 aaPredicted RBP12.99□□□□□ -0.33
VEGFA-224ENST00000523873 NCEH1Q6PIU2 408 aa12.99□□□□□ -0.33
VEGFA-224ENST00000523873 BBS12Q6ZW61 710 aa12.99□□□□□ -0.33
VEGFA-224ENST00000523873 C11orf74Q86VG3 221 aa12.99□□□□□ -0.33
VEGFA-224ENST00000523873 ZC3H18Q86VM9 953 aaKnown RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms