RNA–Protein interactions for RNA: ENST00000523685.5

CTNNA1-239, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-239ENST00000523685 CNOT6LQ96LI5 555 aaKnown RBP5.56□□□□□ -1.52
CTNNA1-239ENST00000523685 MMS19Q96T76 1030 aa5.56□□□□□ -1.52
CTNNA1-239ENST00000523685 PKMYT1Q99640 499 aa5.56□□□□□ -1.52
CTNNA1-239ENST00000523685 CBWD1Q9BRT8 395 aa5.56□□□□□ -1.52
CTNNA1-239ENST00000523685 PANK2Q9BZ23 570 aa5.56□□□□□ -1.52
CTNNA1-239ENST00000523685 SLC32A1Q9H598 525 aa5.56□□□□□ -1.52
CTNNA1-239ENST00000523685 METTL14Q9HCE5 456 aaKnown RBP5.56□□□□□ -1.52
CTNNA1-239ENST00000523685 CFAP97Q9P2B7 532 aa5.56□□□□□ -1.52
CTNNA1-239ENST00000523685 ITGA11Q9UKX5 1188 aa5.56□□□□□ -1.52
CTNNA1-239ENST00000523685 MMP17Q9ULZ9 603 aa5.56□□□□□ -1.52
CTNNA1-239ENST00000523685 ARHGAP26Q9UNA1 814 aa5.56□□□□□ -1.52
CTNNA1-239ENST00000523685 SMC3Q9UQE7 1217 aa5.56□□□□□ -1.52
CTNNA1-239ENST00000523685 CPQQ9Y646 472 aa5.56□□□□□ -1.52
CTNNA1-239ENST00000523685 GREB1Q4ZG55 1949 aa5.56□□□□□ -1.52
CTNNA1-239ENST00000523685 TSC2P49815 1807 aa5.55□□□□□ -1.52
CTNNA1-239ENST00000523685 IGF2RP11717 2491 aa5.55□□□□□ -1.52
CTNNA1-239ENST00000523685 SCN1AP35498 2009 aa5.55□□□□□ -1.52
CTNNA1-239ENST00000523685 MYH11P35749 1972 aa5.55□□□□□ -1.52
CTNNA1-239ENST00000523685 SH3D21A4FU49 640 aa5.55□□□□□ -1.52
CTNNA1-239ENST00000523685 VPS37CA5D8V6 355 aaPredicted RBP5.55□□□□□ -1.52
CTNNA1-239ENST00000523685 TBC1D3BA6NDS4 549 aa5.55□□□□□ -1.52
CTNNA1-239ENST00000523685 SRRM3A6NNA2 597 aaPredicted RBP5.55□□□□□ -1.52
CTNNA1-239ENST00000523685 F8VP50 259 aa5.55□□□□□ -1.52
CTNNA1-239ENST00000523685 DDX3XO00571 662 aaKnown RBP eCLIP5.55□□□□□ -1.52
CTNNA1-239ENST00000523685 KAT7O95251 611 aa5.55□□□□□ -1.52
CTNNA1-239ENST00000523685 BMP15O95972 392 aa5.55□□□□□ -1.52
CTNNA1-239ENST00000523685 LDHAP00338 332 aaKnown RBP5.55□□□□□ -1.52
CTNNA1-239ENST00000523685 TNNC2P02585 160 aa5.55□□□□□ -1.52
CTNNA1-239ENST00000523685 MYBL2P10244 700 aa5.55□□□□□ -1.52
CTNNA1-239ENST00000523685 IRF1P10914 325 aa5.55□□□□□ -1.52
CTNNA1-239ENST00000523685 GAP43P17677 238 aa5.55□□□□□ -1.52
CTNNA1-239ENST00000523685 ENGP17813 658 aa5.55□□□□□ -1.52
CTNNA1-239ENST00000523685 CSRP1P21291 193 aaKnown RBP5.55□□□□□ -1.52
CTNNA1-239ENST00000523685 ENPP1P22413 925 aa5.55□□□□□ -1.52
CTNNA1-239ENST00000523685 MAGEA11P43364 429 aa5.55□□□□□ -1.52
CTNNA1-239ENST00000523685 PDE6CP51160 858 aa5.55□□□□□ -1.52
CTNNA1-239ENST00000523685 CASP5P51878 434 aa5.55□□□□□ -1.52
CTNNA1-239ENST00000523685 MRPS21P82921 87 aaKnown RBP5.55□□□□□ -1.52
CTNNA1-239ENST00000523685 ZXDBP98169 803 aa5.55□□□□□ -1.52
CTNNA1-239ENST00000523685 CEBPZQ03701 1054 aaKnown RBP5.55□□□□□ -1.52
CTNNA1-239ENST00000523685 LMAN2Q12907 356 aa5.55□□□□□ -1.52
CTNNA1-239ENST00000523685 UGT8Q16880 541 aa5.55□□□□□ -1.52
CTNNA1-239ENST00000523685 CFAP221Q4G0U5 840 aa5.55□□□□□ -1.52
CTNNA1-239ENST00000523685 VWA3BQ502W6 1294 aa5.55□□□□□ -1.52
CTNNA1-239ENST00000523685 EOGTQ5NDL2 527 aa5.55□□□□□ -1.52
CTNNA1-239ENST00000523685 RRAGBQ5VZM2 374 aa5.55□□□□□ -1.52
CTNNA1-239ENST00000523685 LYSMD4Q5XG99 296 aa5.55□□□□□ -1.52
CTNNA1-239ENST00000523685 GRAMD4Q6IC98 578 aa5.55□□□□□ -1.52
CTNNA1-239ENST00000523685 FAM171BQ6P995 826 aa5.55□□□□□ -1.52
CTNNA1-239ENST00000523685 DENND5BQ6ZUT9 1274 aa5.55□□□□□ -1.52
CTNNA1-239ENST00000523685 SYT12Q8IV01 421 aa5.55□□□□□ -1.52
CTNNA1-239ENST00000523685 ADGRG2Q8IZP9 1017 aa5.55□□□□□ -1.52
CTNNA1-239ENST00000523685 HDDC3Q8N4P3 179 aa5.55□□□□□ -1.52
CTNNA1-239ENST00000523685 LRRC52Q8N7C0 313 aa5.55□□□□□ -1.52
CTNNA1-239ENST00000523685 IL17RCQ8NAC3 791 aa5.55□□□□□ -1.52
CTNNA1-239ENST00000523685 OR5B17Q8NGF7 314 aa5.55□□□□□ -1.52
CTNNA1-239ENST00000523685 OR2I1PQ8NGU4 316 aa5.55□□□□□ -1.52
CTNNA1-239ENST00000523685 OR6B3Q8NGW1 331 aa5.55□□□□□ -1.52
CTNNA1-239ENST00000523685 HVCN1Q96D96 273 aa5.55□□□□□ -1.52
CTNNA1-239ENST00000523685 FUBP3Q96I24 572 aaKnown RBP eCLIP5.55□□□□□ -1.52
CTNNA1-239ENST00000523685 FAXDC2Q96IV6 333 aa5.55□□□□□ -1.52
CTNNA1-239ENST00000523685 FNBP1Q96RU3 617 aa5.55□□□□□ -1.52
CTNNA1-239ENST00000523685 PNKPQ96T60 521 aa5.55□□□□□ -1.52
CTNNA1-239ENST00000523685 FGFBP2Q9BYJ0 223 aa5.55□□□□□ -1.52
CTNNA1-239ENST00000523685 SNX25Q9H3E2 840 aa5.55□□□□□ -1.52
CTNNA1-239ENST00000523685 ST6GALNAC4Q9H4F1 302 aa5.55□□□□□ -1.52
CTNNA1-239ENST00000523685 MTG2Q9H4K7 406 aa5.55□□□□□ -1.52
CTNNA1-239ENST00000523685 L2HGDHQ9H9P8 463 aa5.55□□□□□ -1.52
CTNNA1-239ENST00000523685 TMEM74BQ9NUR3 256 aa5.55□□□□□ -1.52
CTNNA1-239ENST00000523685 MKS1Q9NXB0 559 aa5.55□□□□□ -1.52
CTNNA1-239ENST00000523685 GDAP2Q9NXN4 497 aa5.55□□□□□ -1.52
CTNNA1-239ENST00000523685 KCMF1Q9P0J7 381 aa5.55□□□□□ -1.52
CTNNA1-239ENST00000523685 NTMQ9P121 344 aa5.55□□□□□ -1.52
CTNNA1-239ENST00000523685 FTSJ1Q9UET6 329 aa5.55□□□□□ -1.52
CTNNA1-239ENST00000523685 SIX4Q9UIU6 781 aa5.55□□□□□ -1.52
CTNNA1-239ENST00000523685 FBXO10Q9UK96 956 aa5.55□□□□□ -1.52
CTNNA1-239ENST00000523685 KLK13Q9UKR3 277 aa5.55□□□□□ -1.52
CTNNA1-239ENST00000523685 CDH9Q9ULB4 789 aa5.55□□□□□ -1.52
CTNNA1-239ENST00000523685 CLIC4Q9Y696 253 aa5.55□□□□□ -1.52
CTNNA1-239ENST00000523685 ATRXP46100 2492 aa5.55□□□□□ -1.52
CTNNA1-239ENST00000523685 SPAG17Q6Q759 2223 aa5.55□□□□□ -1.52
CTNNA1-239ENST00000523685 FAM208BQ5VWN6 2430 aa5.55□□□□□ -1.52
CTNNA1-239ENST00000523685 PTPRJQ12913 1337 aa5.54□□□□□ -1.52
CTNNA1-239ENST00000523685 FRYQ5TBA9 3013 aa5.54□□□□□ -1.52
CTNNA1-239ENST00000523685 TMEM8BA6NDV4 472 aa5.54□□□□□ -1.52
CTNNA1-239ENST00000523685 ZNF840PA6NDX5 716 aa5.54□□□□□ -1.52
CTNNA1-239ENST00000523685 CLDN5O00501 218 aa5.54□□□□□ -1.52
CTNNA1-239ENST00000523685 SLC9A3R1O14745 358 aaPredicted RBP5.54□□□□□ -1.52
CTNNA1-239ENST00000523685 PCDH8O95206 1070 aa5.54□□□□□ -1.52
CTNNA1-239ENST00000523685 MT-CO1P00395 513 aa5.54□□□□□ -1.52
CTNNA1-239ENST00000523685 DLATP10515 647 aaKnown RBP5.54□□□□□ -1.52
CTNNA1-239ENST00000523685 ZNF28P17035 718 aa5.54□□□□□ -1.52
CTNNA1-239ENST00000523685 GNL1P36915 607 aaPredicted RBP5.54□□□□□ -1.52
CTNNA1-239ENST00000523685 P2RY2P41231 377 aa5.54□□□□□ -1.52
CTNNA1-239ENST00000523685 STAT6P42226 847 aa5.54□□□□□ -1.52
CTNNA1-239ENST00000523685 AFF3P51826 1226 aaKnown RBP5.54□□□□□ -1.52
CTNNA1-239ENST00000523685 NEK2P51955 445 aa5.54□□□□□ -1.52
CTNNA1-239ENST00000523685 CACNA2D1P54289 1103 aa5.54□□□□□ -1.52
CTNNA1-239ENST00000523685 SLC7A9P82251 487 aa5.54□□□□□ -1.52
CTNNA1-239ENST00000523685 POU5F1Q01860 360 aaKnown RBP5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms