RNA–Protein interactions for RNA: ENST00000523387.5

CSMD1-212, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 3,989 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-212ENST00000523387 PLD3Q8IV08 490 aa9.14□□□□□ -0.95
CSMD1-212ENST00000523387 PYROXD2Q8N2H3 581 aa9.14□□□□□ -0.95
CSMD1-212ENST00000523387 GIPC2Q8TF65 315 aa9.14□□□□□ -0.95
CSMD1-212ENST00000523387 TRAPPC12Q8WVT3 735 aa9.14□□□□□ -0.95
CSMD1-212ENST00000523387 SEPT8Q92599 483 aa9.14□□□□□ -0.95
CSMD1-212ENST00000523387 KCTD14Q9BQ13 255 aaPredicted RBP9.14□□□□□ -0.95
CSMD1-212ENST00000523387 BRD8Q9H0E9 1235 aa9.14□□□□□ -0.95
CSMD1-212ENST00000523387 NOL6Q9H6R4 1146 aaKnown RBP9.14□□□□□ -0.95
CSMD1-212ENST00000523387 PLEKHA5Q9HAU0 1116 aa9.14□□□□□ -0.95
CSMD1-212ENST00000523387 OXSMQ9NWU1 459 aa9.14□□□□□ -0.95
CSMD1-212ENST00000523387 MTF2Q9Y483 593 aaPredicted RBP9.14□□□□□ -0.95
CSMD1-212ENST00000523387 C9JVG2 144 aa9.13□□□□□ -0.95
CSMD1-212ENST00000523387 VWA5AO00534 786 aa9.13□□□□□ -0.95
CSMD1-212ENST00000523387 SNAP91O60641 907 aa9.13□□□□□ -0.95
CSMD1-212ENST00000523387 KRT8P05787 483 aa9.13□□□□□ -0.95
CSMD1-212ENST00000523387 ATICP31939 592 aa9.13□□□□□ -0.95
CSMD1-212ENST00000523387 MRPS15P82914 257 aaKnown RBP9.13□□□□□ -0.95
CSMD1-212ENST00000523387 PPIL2Q13356 520 aa9.13□□□□□ -0.95
CSMD1-212ENST00000523387 TUBB3Q13509 450 aa9.13□□□□□ -0.95
CSMD1-212ENST00000523387 HERC3Q15034 1050 aa9.13□□□□□ -0.95
CSMD1-212ENST00000523387 ANKDD1AQ495B1 522 aa9.13□□□□□ -0.95
CSMD1-212ENST00000523387 DCAF15Q66K64 600 aa9.13□□□□□ -0.95
CSMD1-212ENST00000523387 PMF1Q6P1K2 205 aa9.13□□□□□ -0.95
CSMD1-212ENST00000523387 CHSY3Q70JA7 882 aa9.13□□□□□ -0.95
CSMD1-212ENST00000523387 ILDR2Q71H61 639 aa9.13□□□□□ -0.95
CSMD1-212ENST00000523387 ARMCX2Q7L311 632 aa9.13□□□□□ -0.95
CSMD1-212ENST00000523387 CHST15Q7LFX5 561 aaPredicted RBP9.13□□□□□ -0.95
CSMD1-212ENST00000523387 FSTL5Q8N475 847 aaPredicted RBP9.13□□□□□ -0.95
CSMD1-212ENST00000523387 ANKRD52Q8NB46 1076 aa9.13□□□□□ -0.95
CSMD1-212ENST00000523387 CCDC126Q96EE4 140 aa9.13□□□□□ -0.95
CSMD1-212ENST00000523387 PIWIL1Q96J94 861 aaKnown RBP9.13□□□□□ -0.95
CSMD1-212ENST00000523387 PGLYRP2Q96PD5 576 aa9.13□□□□□ -0.95
CSMD1-212ENST00000523387 KCTD15Q96SI1 283 aaPredicted RBP9.13□□□□□ -0.95
CSMD1-212ENST00000523387 SLC29A1Q99808 456 aa9.13□□□□□ -0.95
CSMD1-212ENST00000523387 FANCEQ9HB96 536 aa9.13□□□□□ -0.95
CSMD1-212ENST00000523387 CDHR5Q9HBB8 845 aa9.13□□□□□ -0.95
CSMD1-212ENST00000523387 CHRAC1Q9NRG0 131 aa9.13□□□□□ -0.95
CSMD1-212ENST00000523387 SUCOQ9UBS9 1254 aaKnown RBP9.13□□□□□ -0.95
CSMD1-212ENST00000523387 NDUFAF1Q9Y375 327 aa9.13□□□□□ -0.95
CSMD1-212ENST00000523387 MAST2Q6P0Q8 1798 aa9.13□□□□□ -0.95
CSMD1-212ENST00000523387 MAGEB16A2A368 324 aa9.13□□□□□ -0.95
CSMD1-212ENST00000523387 FUOMA2VDF0 154 aa9.13□□□□□ -0.95
CSMD1-212ENST00000523387 ACKR2O00590 384 aa9.13□□□□□ -0.95
CSMD1-212ENST00000523387 CYP2C8P10632 490 aa9.13□□□□□ -0.95
CSMD1-212ENST00000523387 HDCP19113 662 aa9.13□□□□□ -0.95
CSMD1-212ENST00000523387 ATP5F1P24539 256 aaPredicted RBP9.13□□□□□ -0.95
CSMD1-212ENST00000523387 LSM3P62310 102 aaKnown RBP9.13□□□□□ -0.95
CSMD1-212ENST00000523387 PCSK7Q16549 785 aa9.13□□□□□ -0.95
CSMD1-212ENST00000523387 TMTC4Q5T4D3 741 aa9.13□□□□□ -0.95
CSMD1-212ENST00000523387 PPP1R26Q5T8A7 1209 aaPredicted RBP9.13□□□□□ -0.95
CSMD1-212ENST00000523387 SCARA3Q6AZY7 606 aa9.13□□□□□ -0.95
CSMD1-212ENST00000523387 ZNF470Q6ECI4 717 aa9.13□□□□□ -0.95
CSMD1-212ENST00000523387 UTS2BQ765I0 119 aa9.13□□□□□ -0.95
CSMD1-212ENST00000523387 DEFB106AQ8N104 65 aa9.13□□□□□ -0.95
CSMD1-212ENST00000523387 C1orf127Q8N9H9 656 aa9.13□□□□□ -0.95
CSMD1-212ENST00000523387 GRIN3AQ8TCU5 1115 aa9.13□□□□□ -0.95
CSMD1-212ENST00000523387 NXNL1Q96CM4 212 aa9.13□□□□□ -0.95
CSMD1-212ENST00000523387 CPB2Q96IY4 423 aa9.13□□□□□ -0.95
CSMD1-212ENST00000523387 MAGED4Q96JG8 741 aa9.13□□□□□ -0.95
CSMD1-212ENST00000523387 HAPLN2Q9GZV7 340 aa9.13□□□□□ -0.95
CSMD1-212ENST00000523387 PTPRHQ9HD43 1115 aa9.13□□□□□ -0.95
CSMD1-212ENST00000523387 PRMT7Q9NVM4 692 aaPredicted RBP9.13□□□□□ -0.95
CSMD1-212ENST00000523387 RIPK3Q9Y572 518 aa9.13□□□□□ -0.95
CSMD1-212ENST00000523387 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.13□□□□□ -0.95
CSMD1-212ENST00000523387 MYH9P35579 1960 aaKnown RBP9.13□□□□□ -0.95
CSMD1-212ENST00000523387 TMEM247A6NEH6 219 aa9.13□□□□□ -0.95
CSMD1-212ENST00000523387 H0Y626 953 aa9.13□□□□□ -0.95
CSMD1-212ENST00000523387 AP3B1O00203 1094 aa9.13□□□□□ -0.95
CSMD1-212ENST00000523387 MDM4O15151 490 aa9.13□□□□□ -0.95
CSMD1-212ENST00000523387 SLC22A2O15244 555 aa9.13□□□□□ -0.95
CSMD1-212ENST00000523387 MTSS1O43312 755 aa9.13□□□□□ -0.95
CSMD1-212ENST00000523387 TRIM16O95361 564 aa9.13□□□□□ -0.95
CSMD1-212ENST00000523387 GJB1P08034 283 aa9.13□□□□□ -0.95
CSMD1-212ENST00000523387 ARL2P36404 184 aa9.13□□□□□ -0.95
CSMD1-212ENST00000523387 CD151P48509 253 aa9.13□□□□□ -0.95
CSMD1-212ENST00000523387 ACADVLP49748 655 aa9.13□□□□□ -0.95
CSMD1-212ENST00000523387 CLCN2P51788 898 aa9.13□□□□□ -0.95
CSMD1-212ENST00000523387 CLDN10P78369 228 aa9.13□□□□□ -0.95
CSMD1-212ENST00000523387 PRKCQQ04759 706 aa9.13□□□□□ -0.95
CSMD1-212ENST00000523387 CDH17Q12864 832 aa9.13□□□□□ -0.95
CSMD1-212ENST00000523387 ZNF460Q14592 562 aa9.13□□□□□ -0.95
CSMD1-212ENST00000523387 BEST2Q8NFU1 509 aa9.13□□□□□ -0.95
CSMD1-212ENST00000523387 DNAJB14Q8TBM8 379 aa9.13□□□□□ -0.95
CSMD1-212ENST00000523387 OSCP1Q8WVF1 389 aa9.13□□□□□ -0.95
CSMD1-212ENST00000523387 BDH2Q9BUT1 245 aa9.13□□□□□ -0.95
CSMD1-212ENST00000523387 CDT1Q9H211 546 aa9.13□□□□□ -0.95
CSMD1-212ENST00000523387 TBC1D13Q9NVG8 400 aa9.13□□□□□ -0.95
CSMD1-212ENST00000523387 TUBGCP4Q9UGJ1 667 aa9.13□□□□□ -0.95
CSMD1-212ENST00000523387 ANAPC2Q9UJX6 822 aa9.13□□□□□ -0.95
CSMD1-212ENST00000523387 CPSF3Q9UKF6 684 aaKnown RBP9.13□□□□□ -0.95
CSMD1-212ENST00000523387 DSEQ9UL01 958 aa9.13□□□□□ -0.95
CSMD1-212ENST00000523387 BAG5Q9UL15 447 aa9.13□□□□□ -0.95
CSMD1-212ENST00000523387 KANSL1LA0AUZ9 987 aa9.12□□□□□ -0.95
CSMD1-212ENST00000523387 HMX2A2RU54 273 aa9.12□□□□□ -0.95
CSMD1-212ENST00000523387 EI24O14681 340 aa9.12□□□□□ -0.95
CSMD1-212ENST00000523387 KCNH1O95259 989 aa9.12□□□□□ -0.95
CSMD1-212ENST00000523387 NPY2RP49146 381 aa9.12□□□□□ -0.95
CSMD1-212ENST00000523387 NEK2P51955 445 aa9.12□□□□□ -0.95
CSMD1-212ENST00000523387 PGGT1BP53609 377 aa9.12□□□□□ -0.95
CSMD1-212ENST00000523387 CAPRIN1Q14444 709 aaKnown RBP9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms