RNA–Protein interactions for RNA: ENST00000523237.1

CLN8-206, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 3

Gene CLN8, Length 835 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-206ENST00000523237 RXRGP48443 463 aa16.5■□□□□ 0.23
CLN8-206ENST00000523237 UBASH3AP57075 661 aa16.5■□□□□ 0.23
CLN8-206ENST00000523237 TPI1P60174 286 aa16.5■□□□□ 0.23
CLN8-206ENST00000523237 SHBQ15464 509 aa16.5■□□□□ 0.23
CLN8-206ENST00000523237 ZNF284Q2VY69 593 aa16.5■□□□□ 0.23
CLN8-206ENST00000523237 PARP15Q460N3 678 aa16.5■□□□□ 0.23
CLN8-206ENST00000523237 LEKR1Q6ZMV7 388 aa16.5■□□□□ 0.23
CLN8-206ENST00000523237 GATAD2AQ86YP4 633 aa16.5■□□□□ 0.23
CLN8-206ENST00000523237 UMODL1-AS1Q8N2C9 162 aa16.5■□□□□ 0.23
CLN8-206ENST00000523237 OR6K2Q8NGY2 324 aa16.5■□□□□ 0.23
CLN8-206ENST00000523237 FNIP1Q8TF40 1166 aa16.5■□□□□ 0.23
CLN8-206ENST00000523237 KLK6Q92876 244 aa16.5■□□□□ 0.23
CLN8-206ENST00000523237 ZNF653Q96CK0 615 aa16.5■□□□□ 0.23
CLN8-206ENST00000523237 KLHDC7BQ96G42 594 aa16.5■□□□□ 0.23
CLN8-206ENST00000523237 EIF3CQ99613 913 aaKnown RBP16.5■□□□□ 0.23
CLN8-206ENST00000523237 OSBPL1AQ9BXW6 950 aa16.5■□□□□ 0.23
CLN8-206ENST00000523237 TOR4AQ9NXH8 423 aa16.5■□□□□ 0.23
CLN8-206ENST00000523237 FTSJ1Q9UET6 329 aa16.5■□□□□ 0.23
CLN8-206ENST00000523237 A0A1W2PQJ5 194 aa16.49■□□□□ 0.23
CLN8-206ENST00000523237 GOLGA8CPA6NN73 597 aa16.49■□□□□ 0.23
CLN8-206ENST00000523237 RASA4BC9J798 803 aa16.49■□□□□ 0.23
CLN8-206ENST00000523237 RASA4O43374 803 aa16.49■□□□□ 0.23
CLN8-206ENST00000523237 AP1G1O43747 822 aa16.49■□□□□ 0.23
CLN8-206ENST00000523237 TMCC1O94876 653 aa16.49■□□□□ 0.23
CLN8-206ENST00000523237 MYBL1P10243 752 aa16.49■□□□□ 0.23
CLN8-206ENST00000523237 EPHA8P29322 1005 aaPredicted RBP16.49■□□□□ 0.23
CLN8-206ENST00000523237 RPS21P63220 83 aaKnown RBP16.49■□□□□ 0.23
CLN8-206ENST00000523237 RAD51Q06609 339 aa16.49■□□□□ 0.23
CLN8-206ENST00000523237 SERINC3Q13530 473 aa16.49■□□□□ 0.23
CLN8-206ENST00000523237 TMEM259Q4ZIN3 620 aa16.49■□□□□ 0.23
CLN8-206ENST00000523237 INO80DQ53TQ3 878 aaPredicted RBP16.49■□□□□ 0.23
CLN8-206ENST00000523237 TDRD12Q587J7 1177 aaKnown RBP16.49■□□□□ 0.23
CLN8-206ENST00000523237 ZNF805Q5CZA5 627 aa16.49■□□□□ 0.23
CLN8-206ENST00000523237 ERMARDQ5T6L9 678 aa16.49■□□□□ 0.23
CLN8-206ENST00000523237 KIAA1161Q6NSJ0 714 aa16.49■□□□□ 0.23
CLN8-206ENST00000523237 PARS2Q7L3T8 475 aaKnown RBP16.49■□□□□ 0.23
CLN8-206ENST00000523237 ZSCAN30Q86W11 494 aa16.49■□□□□ 0.23
CLN8-206ENST00000523237 SPATS2Q86XZ4 545 aaKnown RBP16.49■□□□□ 0.23
CLN8-206ENST00000523237 DNAAF5Q86Y56 855 aa16.49■□□□□ 0.23
CLN8-206ENST00000523237 TMEM145Q8NBT3 493 aa16.49■□□□□ 0.23
CLN8-206ENST00000523237 SAP25Q8TEE9 199 aa16.49■□□□□ 0.23
CLN8-206ENST00000523237 RAB7BQ96AH8 199 aa16.49■□□□□ 0.23
CLN8-206ENST00000523237 HMCESQ96FZ2 354 aa16.49■□□□□ 0.23
CLN8-206ENST00000523237 FEM1CQ96JP0 617 aa16.49■□□□□ 0.23
CLN8-206ENST00000523237 GDAP1L1Q96MZ0 367 aa16.49■□□□□ 0.23
CLN8-206ENST00000523237 MYOCQ99972 504 aa16.49■□□□□ 0.23
CLN8-206ENST00000523237 DHX35Q9H5Z1 703 aaKnown RBP16.49■□□□□ 0.23
CLN8-206ENST00000523237 MRPL47Q9HD33 250 aaKnown RBP16.49■□□□□ 0.23
CLN8-206ENST00000523237 PCSK1NQ9UHG2 260 aa16.49■□□□□ 0.23
CLN8-206ENST00000523237 ZFR2Q9UPR6 939 aaKnown RBP16.49■□□□□ 0.23
CLN8-206ENST00000523237 CA5BQ9Y2D0 317 aa16.49■□□□□ 0.23
CLN8-206ENST00000523237 FADS3Q9Y5Q0 445 aa16.49■□□□□ 0.23
CLN8-206ENST00000523237 BZW2Q9Y6E2 419 aaKnown RBP16.49■□□□□ 0.23
CLN8-206ENST00000523237 AKAP13Q12802 2813 aa16.49■□□□□ 0.23
CLN8-206ENST00000523237 PRPSAP2O60256 369 aa16.48■□□□□ 0.23
CLN8-206ENST00000523237 IGSF6O95976 241 aa16.48■□□□□ 0.23
CLN8-206ENST00000523237 THEGLP0DJG4 465 aa16.48■□□□□ 0.23
CLN8-206ENST00000523237 GKP32189 559 aa16.48■□□□□ 0.23
CLN8-206ENST00000523237 PBX1P40424 430 aa16.48■□□□□ 0.23
CLN8-206ENST00000523237 RHOAP61586 193 aa16.48■□□□□ 0.23
CLN8-206ENST00000523237 MYLK3Q32MK0 819 aa16.48■□□□□ 0.23
CLN8-206ENST00000523237 ATXN7L2Q5T6C5 722 aaPredicted RBP16.48■□□□□ 0.23
CLN8-206ENST00000523237 SEL1L3Q68CR1 1132 aa16.48■□□□□ 0.23
CLN8-206ENST00000523237 VPS36Q86VN1 386 aa16.48■□□□□ 0.23
CLN8-206ENST00000523237 KDF1Q8NAX2 398 aaPredicted RBP16.48■□□□□ 0.23
CLN8-206ENST00000523237 FAM174AQ8TBP5 190 aa16.48■□□□□ 0.23
CLN8-206ENST00000523237 SYN2Q92777 582 aaPredicted RBP16.48■□□□□ 0.23
CLN8-206ENST00000523237 IQCDQ96DY2 449 aa16.48■□□□□ 0.23
CLN8-206ENST00000523237 NCAPGQ9BPX3 1015 aa16.48■□□□□ 0.23
CLN8-206ENST00000523237 SNRNP25Q9BV90 132 aaKnown RBP16.48■□□□□ 0.23
CLN8-206ENST00000523237 KLC2Q9H0B6 622 aa16.48■□□□□ 0.23
CLN8-206ENST00000523237 ISCUQ9H1K1 167 aa16.48■□□□□ 0.23
CLN8-206ENST00000523237 GPATCH2LQ9NWQ4 482 aa16.48■□□□□ 0.23
CLN8-206ENST00000523237 MYO1AQ9UBC5 1043 aa16.48■□□□□ 0.23
CLN8-206ENST00000523237 CACNA1BQ00975 2339 aa16.47■□□□□ 0.23
CLN8-206ENST00000523237 PLXNB3Q9ULL4 1909 aa16.47■□□□□ 0.23
CLN8-206ENST00000523237 USP24Q9UPU5 2620 aa16.47■□□□□ 0.23
CLN8-206ENST00000523237 C16orf96A6NNT2 1141 aa16.47■□□□□ 0.23
CLN8-206ENST00000523237 EEF2KO00418 725 aaKnown RBP16.47■□□□□ 0.23
CLN8-206ENST00000523237 DAPK3O43293 454 aa16.47■□□□□ 0.23
CLN8-206ENST00000523237 TSPAN6O43657 245 aa16.47■□□□□ 0.23
CLN8-206ENST00000523237 DKK1O94907 266 aa16.47■□□□□ 0.23
CLN8-206ENST00000523237 LDOC1O95751 146 aaPredicted RBP16.47■□□□□ 0.23
CLN8-206ENST00000523237 UGT2B4P06133 528 aa16.47■□□□□ 0.23
CLN8-206ENST00000523237 NDST2P52849 883 aa16.47■□□□□ 0.23
CLN8-206ENST00000523237 BNIP3Q12983 259 aa16.47■□□□□ 0.23
CLN8-206ENST00000523237 MAPK8IP2Q13387 824 aaPredicted RBP16.47■□□□□ 0.23
CLN8-206ENST00000523237 PSTKQ8IV42 348 aaKnown RBP16.47■□□□□ 0.23
CLN8-206ENST00000523237 ARFGAP1Q8N6T3 406 aa16.47■□□□□ 0.23
CLN8-206ENST00000523237 ARHGEF26Q96DR7 871 aa16.47■□□□□ 0.23
CLN8-206ENST00000523237 KLHL32Q96NJ5 620 aa16.47■□□□□ 0.23
CLN8-206ENST00000523237 PEBP4Q96S96 227 aa16.47■□□□□ 0.23
CLN8-206ENST00000523237 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.47■□□□□ 0.23
CLN8-206ENST00000523237 SLC17A9Q9BYT1 436 aa16.47■□□□□ 0.23
CLN8-206ENST00000523237 TRIM7Q9C029 511 aa16.47■□□□□ 0.23
CLN8-206ENST00000523237 FZD3Q9NPG1 666 aa16.47■□□□□ 0.23
CLN8-206ENST00000523237 A6NNZ2 444 aa16.46■□□□□ 0.23
CLN8-206ENST00000523237 NEMP1O14524 444 aa16.46■□□□□ 0.23
CLN8-206ENST00000523237 SERPING1P05155 500 aa16.46■□□□□ 0.23
CLN8-206ENST00000523237 MIPP30301 263 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms