RNA–Protein interactions for RNA: ENST00000523190.5

PVT1-217, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 443 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-217ENST00000523190 ZFYVE19Q96K21 471 aa6.82□□□□□ -1.32
PVT1-217ENST00000523190 LMLNQ96KR4 655 aa6.82□□□□□ -1.32
PVT1-217ENST00000523190 MRGPRX2Q96LB1 330 aa6.82□□□□□ -1.32
PVT1-217ENST00000523190 FAM161BQ96MY7 647 aa6.82□□□□□ -1.32
PVT1-217ENST00000523190 SH3GL2Q99962 352 aa6.82□□□□□ -1.32
PVT1-217ENST00000523190 SEMA3CQ99985 751 aa6.82□□□□□ -1.32
PVT1-217ENST00000523190 MGME1Q9BQP7 344 aa6.82□□□□□ -1.32
PVT1-217ENST00000523190 TRIM56Q9BRZ2 755 aaKnown RBP6.82□□□□□ -1.32
PVT1-217ENST00000523190 FEM1AQ9BSK4 669 aa6.82□□□□□ -1.32
PVT1-217ENST00000523190 POLR1EQ9GZS1 481 aaKnown RBP6.82□□□□□ -1.32
PVT1-217ENST00000523190 S1PR5Q9H228 398 aa6.82□□□□□ -1.32
PVT1-217ENST00000523190 CENPHQ9H3R5 247 aa6.82□□□□□ -1.32
PVT1-217ENST00000523190 ABCB8Q9NUT2 735 aa6.82□□□□□ -1.32
PVT1-217ENST00000523190 DUS2Q9NX74 493 aaKnown RBP6.82□□□□□ -1.32
PVT1-217ENST00000523190 GDE1Q9NZC3 331 aa6.82□□□□□ -1.32
PVT1-217ENST00000523190 MARK1Q9P0L2 795 aa6.82□□□□□ -1.32
PVT1-217ENST00000523190 LHX3Q9UBR4 397 aa6.82□□□□□ -1.32
PVT1-217ENST00000523190 ZC3H7BQ9UGR2 993 aaKnown RBP6.82□□□□□ -1.32
PVT1-217ENST00000523190 SEPT3Q9UH03 358 aa6.82□□□□□ -1.32
PVT1-217ENST00000523190 INTS6Q9UL03 887 aaKnown RBP6.82□□□□□ -1.32
PVT1-217ENST00000523190 CDH7Q9ULB5 785 aa6.82□□□□□ -1.32
PVT1-217ENST00000523190 COLQQ9Y215 455 aaPredicted RBP6.82□□□□□ -1.32
PVT1-217ENST00000523190 AAR2Q9Y312 384 aaKnown RBP6.82□□□□□ -1.32
PVT1-217ENST00000523190 FCF1Q9Y324 198 aaKnown RBP6.82□□□□□ -1.32
PVT1-217ENST00000523190 PCDHGA10Q9Y5H3 936 aa6.82□□□□□ -1.32
PVT1-217ENST00000523190 MAD1L1Q9Y6D9 718 aa6.82□□□□□ -1.32
PVT1-217ENST00000523190 CHD5Q8TDI0 1954 aa6.82□□□□□ -1.32
PVT1-217ENST00000523190 A0A1W2PPC1 479 aa6.81□□□□□ -1.32
PVT1-217ENST00000523190 TLDC2A0PJX2 215 aa6.81□□□□□ -1.32
PVT1-217ENST00000523190 SDR42E2A6NKP2 422 aa6.81□□□□□ -1.32
PVT1-217ENST00000523190 POC1B-GALNT4F8VUJ3 575 aa6.81□□□□□ -1.32
PVT1-217ENST00000523190 K7ERQ8 282 aa6.81□□□□□ -1.32
PVT1-217ENST00000523190 SOX1O00570 391 aaPredicted RBP6.81□□□□□ -1.32
PVT1-217ENST00000523190 TRIM24O15164 1050 aa6.81□□□□□ -1.32
PVT1-217ENST00000523190 ATP9BO43861 1147 aa6.81□□□□□ -1.32
PVT1-217ENST00000523190 MT-CO1P00395 513 aa6.81□□□□□ -1.32
PVT1-217ENST00000523190 AGTP01019 485 aa6.81□□□□□ -1.32
PVT1-217ENST00000523190 ADH5P11766 374 aa6.81□□□□□ -1.32
PVT1-217ENST00000523190 PABPC1P11940 636 aaKnown RBP6.81□□□□□ -1.32
PVT1-217ENST00000523190 TSHRP16473 764 aa6.81□□□□□ -1.32
PVT1-217ENST00000523190 TPH1P17752 444 aa6.81□□□□□ -1.32
PVT1-217ENST00000523190 PHBP35232 272 aa6.81□□□□□ -1.32
PVT1-217ENST00000523190 ADRA1AP35348 466 aa6.81□□□□□ -1.32
PVT1-217ENST00000523190 LTBRP36941 435 aa6.81□□□□□ -1.32
PVT1-217ENST00000523190 MTHFRP42898 656 aa6.81□□□□□ -1.32
PVT1-217ENST00000523190 CTSOP43234 321 aaPredicted RBP6.81□□□□□ -1.32
PVT1-217ENST00000523190 SLCO1A2P46721 670 aa6.81□□□□□ -1.32
PVT1-217ENST00000523190 STK19P49842 368 aaPredicted RBP6.81□□□□□ -1.32
PVT1-217ENST00000523190 EIF3BP55884 814 aaKnown RBP6.81□□□□□ -1.32
PVT1-217ENST00000523190 CDH17Q12864 832 aa6.81□□□□□ -1.32
PVT1-217ENST00000523190 CBLBQ13191 982 aa6.81□□□□□ -1.32
PVT1-217ENST00000523190 GRM2Q14416 872 aa6.81□□□□□ -1.32
PVT1-217ENST00000523190 RFTN1Q14699 578 aaPredicted RBP6.81□□□□□ -1.32
PVT1-217ENST00000523190 STAT4Q14765 748 aa6.81□□□□□ -1.32
PVT1-217ENST00000523190 DHCR24Q15392 516 aa6.81□□□□□ -1.32
PVT1-217ENST00000523190 SMAD1Q15797 465 aaKnown RBP6.81□□□□□ -1.32
PVT1-217ENST00000523190 SKIDA1Q1XH10 827 aa6.81□□□□□ -1.32
PVT1-217ENST00000523190 CTC1Q2NKJ3 1217 aa6.81□□□□□ -1.32
PVT1-217ENST00000523190 HSP90B2PQ58FF3 399 aa6.81□□□□□ -1.32
PVT1-217ENST00000523190 TTMPQ5BVD1 217 aa6.81□□□□□ -1.32
PVT1-217ENST00000523190 CERCAMQ5T4B2 595 aa6.81□□□□□ -1.32
PVT1-217ENST00000523190 ATXN7L2Q5T6C5 722 aaPredicted RBP6.81□□□□□ -1.32
PVT1-217ENST00000523190 ALG1LQ6GMV1 187 aa6.81□□□□□ -1.32
PVT1-217ENST00000523190 TANGO2Q6ICL3 276 aa6.81□□□□□ -1.32
PVT1-217ENST00000523190 DENND5AQ6IQ26 1287 aa6.81□□□□□ -1.32
PVT1-217ENST00000523190 CASC4Q6P4E1 433 aa6.81□□□□□ -1.32
PVT1-217ENST00000523190 VITQ6UXI7 678 aa6.81□□□□□ -1.32
PVT1-217ENST00000523190 UNC5AQ6ZN44 842 aa6.81□□□□□ -1.32
PVT1-217ENST00000523190 C3orf62Q6ZUJ4 267 aa6.81□□□□□ -1.32
PVT1-217ENST00000523190 KDELC2Q7Z4H8 507 aa6.81□□□□□ -1.32
PVT1-217ENST00000523190 LINC00523Q86TU6 105 aa6.81□□□□□ -1.32
PVT1-217ENST00000523190 C12orf40Q86WS4 652 aa6.81□□□□□ -1.32
PVT1-217ENST00000523190 ADGRG2Q8IZP9 1017 aa6.81□□□□□ -1.32
PVT1-217ENST00000523190 KRT222Q8N1A0 295 aa6.81□□□□□ -1.32
PVT1-217ENST00000523190 SLC25A41Q8N5S1 370 aa6.81□□□□□ -1.32
PVT1-217ENST00000523190 GOLGA6L1Q8N7Z2 621 aa6.81□□□□□ -1.32
PVT1-217ENST00000523190 FBF1Q8TES7 1133 aa6.81□□□□□ -1.32
PVT1-217ENST00000523190 TADA1Q96BN2 335 aa6.81□□□□□ -1.32
PVT1-217ENST00000523190 LRRC39Q96DD0 335 aa6.81□□□□□ -1.32
PVT1-217ENST00000523190 STAMBPL1Q96FJ0 436 aa6.81□□□□□ -1.32
PVT1-217ENST00000523190 MSLNLQ96KJ4 702 aa6.81□□□□□ -1.32
PVT1-217ENST00000523190 NSMCE3Q96MG7 304 aa6.81□□□□□ -1.32
PVT1-217ENST00000523190 RIPOR3Q96MK2 946 aa6.81□□□□□ -1.32
PVT1-217ENST00000523190 PPP1R2P1Q96PQ5 205 aa6.81□□□□□ -1.32
PVT1-217ENST00000523190 PSKH2Q96QS6 385 aa6.81□□□□□ -1.32
PVT1-217ENST00000523190 EBNA1BP2Q99848 306 aaKnown RBP6.81□□□□□ -1.32
PVT1-217ENST00000523190 KXD1Q9BQD3 176 aa6.81□□□□□ -1.32
PVT1-217ENST00000523190 C2orf49Q9BVC5 232 aaPredicted RBP6.81□□□□□ -1.32
PVT1-217ENST00000523190 FSD1LQ9BXM9 530 aa6.81□□□□□ -1.32
PVT1-217ENST00000523190 PLA2G2FQ9BZM2 168 aa6.81□□□□□ -1.32
PVT1-217ENST00000523190 EBF3Q9H4W6 596 aa6.81□□□□□ -1.32
PVT1-217ENST00000523190 POMKQ9H5K3 350 aa6.81□□□□□ -1.32
PVT1-217ENST00000523190 TRPV4Q9HBA0 871 aa6.81□□□□□ -1.32
PVT1-217ENST00000523190 PLAC1Q9HBJ0 212 aa6.81□□□□□ -1.32
PVT1-217ENST00000523190 TMBIM4Q9HC24 238 aa6.81□□□□□ -1.32
PVT1-217ENST00000523190 ZFP14Q9HCL3 533 aa6.81□□□□□ -1.32
PVT1-217ENST00000523190 MED4Q9NPJ6 270 aa6.81□□□□□ -1.32
PVT1-217ENST00000523190 SCUBE2Q9NQ36 999 aa6.81□□□□□ -1.32
PVT1-217ENST00000523190 HAUS2Q9NVX0 235 aa6.81□□□□□ -1.32
PVT1-217ENST00000523190 OBP2AQ9NY56 170 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms