RNA–Protein interactions for RNA: ENST00000522353.2

PCDHA3-201, Transcript of protocadherin alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA3, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-201ENST00000522353 TSHZ1Q6ZSZ6 1077 aa16.42■□□□□ 0.22
PCDHA3-201ENST00000522353 BBS12Q6ZW61 710 aa16.42■□□□□ 0.22
PCDHA3-201ENST00000522353 ACTRT2Q8TDY3 377 aa16.42■□□□□ 0.22
PCDHA3-201ENST00000522353 FIG4Q92562 907 aa16.42■□□□□ 0.22
PCDHA3-201ENST00000522353 SLC25A23Q9BV35 468 aa16.42■□□□□ 0.22
PCDHA3-201ENST00000522353 ST3GAL1Q11201 340 aa16.41■□□□□ 0.22
PCDHA3-201ENST00000522353 PTPRNQ16849 979 aa16.41■□□□□ 0.22
PCDHA3-201ENST00000522353 BHLHB9Q6PI77 547 aa16.41■□□□□ 0.22
PCDHA3-201ENST00000522353 ZNF621Q6ZSS3 439 aa16.41■□□□□ 0.22
PCDHA3-201ENST00000522353 TMPRSS6Q8IU80 811 aa16.41■□□□□ 0.22
PCDHA3-201ENST00000522353 GLIS3Q8NEA6 775 aa16.41■□□□□ 0.22
PCDHA3-201ENST00000522353 RIPOR3Q96MK2 946 aa16.41■□□□□ 0.22
PCDHA3-201ENST00000522353 ANKZF1Q9H8Y5 726 aa16.41■□□□□ 0.22
PCDHA3-201ENST00000522353 ATP6V1HQ9UI12 483 aa16.41■□□□□ 0.22
PCDHA3-201ENST00000522353 A0A1W2PQ67 120 aa16.41■□□□□ 0.22
PCDHA3-201ENST00000522353 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.41■□□□□ 0.22
PCDHA3-201ENST00000522353 ZBTB22O15209 634 aa16.41■□□□□ 0.22
PCDHA3-201ENST00000522353 SNHG28P0DPA3 235 aa16.41■□□□□ 0.22
PCDHA3-201ENST00000522353 SOX6P35712 828 aa16.41■□□□□ 0.22
PCDHA3-201ENST00000522353 ZCWPW2Q504Y3 356 aa16.41■□□□□ 0.22
PCDHA3-201ENST00000522353 PRR23CQ6ZRP0 262 aa16.41■□□□□ 0.22
PCDHA3-201ENST00000522353 DET1Q7L5Y6 550 aa16.41■□□□□ 0.22
PCDHA3-201ENST00000522353 TERB1Q8NA31 727 aa16.41■□□□□ 0.22
PCDHA3-201ENST00000522353 CERS2Q96G23 380 aa16.41■□□□□ 0.22
PCDHA3-201ENST00000522353 RPRD1BQ9NQG5 326 aaKnown RBP16.41■□□□□ 0.22
PCDHA3-201ENST00000522353 RIPK3Q9Y572 518 aa16.41■□□□□ 0.22
PCDHA3-201ENST00000522353 SYN3O14994 580 aa16.41■□□□□ 0.22
PCDHA3-201ENST00000522353 FASP25445 335 aa16.41■□□□□ 0.22
PCDHA3-201ENST00000522353 HNRNPH1P31943 449 aaKnown RBP16.41■□□□□ 0.22
PCDHA3-201ENST00000522353 FAM187BQ17R55 369 aa16.41■□□□□ 0.22
PCDHA3-201ENST00000522353 HYIQ5T013 277 aa16.41■□□□□ 0.22
PCDHA3-201ENST00000522353 INTS11Q5TA45 600 aaKnown RBP16.41■□□□□ 0.22
PCDHA3-201ENST00000522353 ZDHHC20Q5W0Z9 365 aa16.41■□□□□ 0.22
PCDHA3-201ENST00000522353 STRADAQ7RTN6 431 aa16.41■□□□□ 0.22
PCDHA3-201ENST00000522353 DEPDC7Q96QD5 511 aa16.41■□□□□ 0.22
PCDHA3-201ENST00000522353 NIFKQ9BYG3 293 aaKnown RBP16.41■□□□□ 0.22
PCDHA3-201ENST00000522353 PHPT1Q9NRX4 125 aaPredicted RBP16.41■□□□□ 0.22
PCDHA3-201ENST00000522353 ZNF232Q9UNY5 417 aa16.41■□□□□ 0.22
PCDHA3-201ENST00000522353 LRRC14BA6NHZ5 514 aa16.41■□□□□ 0.22
PCDHA3-201ENST00000522353 MRASO14807 208 aa16.41■□□□□ 0.22
PCDHA3-201ENST00000522353 LGR5O75473 907 aa16.41■□□□□ 0.22
PCDHA3-201ENST00000522353 EPN2O95208 641 aa16.41■□□□□ 0.22
PCDHA3-201ENST00000522353 SPATA31D3P0C874 917 aa16.41■□□□□ 0.22
PCDHA3-201ENST00000522353 CYP3A5P20815 502 aa16.41■□□□□ 0.22
PCDHA3-201ENST00000522353 RGS1Q08116 209 aa16.41■□□□□ 0.22
PCDHA3-201ENST00000522353 TOMM20Q15388 145 aa16.41■□□□□ 0.22
PCDHA3-201ENST00000522353 SPATA31D4Q6ZUB0 917 aa16.41■□□□□ 0.22
PCDHA3-201ENST00000522353 C12orf29Q8N999 325 aa16.41■□□□□ 0.22
PCDHA3-201ENST00000522353 USP6NLQ92738 828 aa16.41■□□□□ 0.22
PCDHA3-201ENST00000522353 PPP1R14AQ96A00 147 aa16.41■□□□□ 0.22
PCDHA3-201ENST00000522353 BDH2Q9BUT1 245 aa16.41■□□□□ 0.22
PCDHA3-201ENST00000522353 PCDHB9Q9Y5E1 797 aa16.41■□□□□ 0.22
PCDHA3-201ENST00000522353 ISM1B1AKI9 464 aa16.4■□□□□ 0.22
PCDHA3-201ENST00000522353 KLRC4O43908 158 aa16.4■□□□□ 0.22
PCDHA3-201ENST00000522353 SLC25A14O95258 325 aaPredicted RBP16.4■□□□□ 0.22
PCDHA3-201ENST00000522353 ETS1P14921 441 aa16.4■□□□□ 0.22
PCDHA3-201ENST00000522353 GOT1P17174 413 aa16.4■□□□□ 0.22
PCDHA3-201ENST00000522353 FMO1Q01740 532 aa16.4■□□□□ 0.22
PCDHA3-201ENST00000522353 FRG1Q14331 258 aaKnown RBP16.4■□□□□ 0.22
PCDHA3-201ENST00000522353 PFKFB4Q16877 469 aa16.4■□□□□ 0.22
PCDHA3-201ENST00000522353 SLC25A52Q3SY17 297 aa16.4■□□□□ 0.22
PCDHA3-201ENST00000522353 DEFB107AQ8IZN7 70 aa16.4■□□□□ 0.22
PCDHA3-201ENST00000522353 KLHL4Q9C0H6 718 aa16.4■□□□□ 0.22
PCDHA3-201ENST00000522353 MORF4L1Q9UBU8 362 aa16.4■□□□□ 0.22
PCDHA3-201ENST00000522353 VAV3Q9UKW4 847 aa16.4■□□□□ 0.22
PCDHA3-201ENST00000522353 TK2O00142 265 aa16.4■□□□□ 0.22
PCDHA3-201ENST00000522353 BUD23O43709 281 aaKnown RBP16.4■□□□□ 0.22
PCDHA3-201ENST00000522353 MLYCDO95822 493 aa16.4■□□□□ 0.22
PCDHA3-201ENST00000522353 PAICSP22234 425 aaKnown RBP16.4■□□□□ 0.22
PCDHA3-201ENST00000522353 ZNF280AP59817 542 aaPredicted RBP16.4■□□□□ 0.22
PCDHA3-201ENST00000522353 BIKQ13323 160 aa16.4■□□□□ 0.22
PCDHA3-201ENST00000522353 ANGPT1Q15389 498 aa16.4■□□□□ 0.22
PCDHA3-201ENST00000522353 TBCELQ5QJ74 424 aa16.4■□□□□ 0.22
PCDHA3-201ENST00000522353 CASP12Q6UXS9 341 aa16.4■□□□□ 0.22
PCDHA3-201ENST00000522353 EIF1ADQ8N9N8 165 aaKnown RBP16.4■□□□□ 0.22
PCDHA3-201ENST00000522353 MRPL45Q9BRJ2 306 aaKnown RBP16.4■□□□□ 0.22
PCDHA3-201ENST00000522353 ALG9Q9H6U8 611 aa16.4■□□□□ 0.22
PCDHA3-201ENST00000522353 KCNE2Q9Y6J6 123 aa16.4■□□□□ 0.22
PCDHA3-201ENST00000522353 UBOX5O94941 541 aa16.4■□□□□ 0.22
PCDHA3-201ENST00000522353 UMPSP11172 480 aa16.4■□□□□ 0.22
PCDHA3-201ENST00000522353 AGMOQ6ZNB7 445 aa16.4■□□□□ 0.22
PCDHA3-201ENST00000522353 UPF1Q92900 1129 aaKnown RBP eCLIP16.4■□□□□ 0.22
PCDHA3-201ENST00000522353 UGT2B28Q9BY64 529 aa16.4■□□□□ 0.22
PCDHA3-201ENST00000522353 LHX5Q9H2C1 402 aa16.4■□□□□ 0.22
PCDHA3-201ENST00000522353 RAB21Q9UL25 225 aa16.4■□□□□ 0.22
PCDHA3-201ENST00000522353 PCDHA11Q9Y5I1 949 aa16.4■□□□□ 0.22
PCDHA3-201ENST00000522353 ACSL4O60488 711 aa16.4■□□□□ 0.22
PCDHA3-201ENST00000522353 CCDC166P0CW27 439 aa16.4■□□□□ 0.22
PCDHA3-201ENST00000522353 TSHRP16473 764 aa16.4■□□□□ 0.22
PCDHA3-201ENST00000522353 TMEM26Q6ZUK4 368 aa16.4■□□□□ 0.22
PCDHA3-201ENST00000522353 FGD2Q7Z6J4 655 aa16.4■□□□□ 0.22
PCDHA3-201ENST00000522353 RBFAQ8N0V3 343 aa16.4■□□□□ 0.22
PCDHA3-201ENST00000522353 EFCAB3Q8N7B9 438 aa16.4■□□□□ 0.22
PCDHA3-201ENST00000522353 ATAD1Q8NBU5 361 aa16.4■□□□□ 0.22
PCDHA3-201ENST00000522353 PHC3Q8NDX5 983 aa16.4■□□□□ 0.22
PCDHA3-201ENST00000522353 ADI1Q9BV57 179 aa16.4■□□□□ 0.22
PCDHA3-201ENST00000522353 TRIT1Q9H3H1 467 aaKnown RBP16.4■□□□□ 0.22
PCDHA3-201ENST00000522353 ZFYVE1Q9HBF4 777 aa16.4■□□□□ 0.22
PCDHA3-201ENST00000522353 ACP6Q9NPH0 428 aa16.4■□□□□ 0.22
PCDHA3-201ENST00000522353 SEMA4BQ9NPR2 832 aaPredicted RBP16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms