RNA–Protein interactions for RNA: ENST00000522222.5

SPIDR-218, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 4

Gene SPIDR, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-218ENST00000522222 PPP1R15BQ5SWA1 713 aa6.96□□□□□ -1.3
SPIDR-218ENST00000522222 ARTNQ5T4W7 220 aa6.96□□□□□ -1.3
SPIDR-218ENST00000522222 SH3PXD2AQ5TCZ1 1133 aa6.96□□□□□ -1.3
SPIDR-218ENST00000522222 DCAF12L1Q5VU92 463 aa6.96□□□□□ -1.3
SPIDR-218ENST00000522222 PMS2CLQ68D20 193 aa6.96□□□□□ -1.3
SPIDR-218ENST00000522222 SDE2Q6IQ49 451 aa6.96□□□□□ -1.3
SPIDR-218ENST00000522222 STRADAQ7RTN6 431 aa6.96□□□□□ -1.3
SPIDR-218ENST00000522222 CCDC117Q8IWD4 279 aaPredicted RBP6.96□□□□□ -1.3
SPIDR-218ENST00000522222 APCDD1Q8J025 514 aa6.96□□□□□ -1.3
SPIDR-218ENST00000522222 PGBD3Q8N328 593 aa6.96□□□□□ -1.3
SPIDR-218ENST00000522222 OR52K2Q8NGK3 314 aa6.96□□□□□ -1.3
SPIDR-218ENST00000522222 FAM172AQ8WUF8 416 aa6.96□□□□□ -1.3
SPIDR-218ENST00000522222 RLN3Q8WXF3 142 aa6.96□□□□□ -1.3
SPIDR-218ENST00000522222 RAPGEF5Q92565 580 aa6.96□□□□□ -1.3
SPIDR-218ENST00000522222 ART4Q93070 314 aa6.96□□□□□ -1.3
SPIDR-218ENST00000522222 ARHGEF26Q96DR7 871 aa6.96□□□□□ -1.3
SPIDR-218ENST00000522222 SNF8Q96H20 258 aa6.96□□□□□ -1.3
SPIDR-218ENST00000522222 SPACA7Q96KW9 195 aa6.96□□□□□ -1.3
SPIDR-218ENST00000522222 MRGPRX1Q96LB2 322 aa6.96□□□□□ -1.3
SPIDR-218ENST00000522222 CCDC114Q96M63 670 aa6.96□□□□□ -1.3
SPIDR-218ENST00000522222 TRIM51Q9BSJ1 452 aa6.96□□□□□ -1.3
SPIDR-218ENST00000522222 NUP85Q9BW27 656 aa6.96□□□□□ -1.3
SPIDR-218ENST00000522222 NEUROG2Q9H2A3 272 aa6.96□□□□□ -1.3
SPIDR-218ENST00000522222 TMEM245Q9H330 911 aa6.96□□□□□ -1.3
SPIDR-218ENST00000522222 GOLPH3Q9H4A6 298 aa6.96□□□□□ -1.3
SPIDR-218ENST00000522222 WDCPQ9H6R7 721 aa6.96□□□□□ -1.3
SPIDR-218ENST00000522222 PARD6AQ9NPB6 346 aa6.96□□□□□ -1.3
SPIDR-218ENST00000522222 CD93Q9NPY3 652 aa6.96□□□□□ -1.3
SPIDR-218ENST00000522222 INTS9Q9NV88 658 aaKnown RBP6.96□□□□□ -1.3
SPIDR-218ENST00000522222 NEU3Q9UQ49 428 aa6.96□□□□□ -1.3
SPIDR-218ENST00000522222 ACTL7BQ9Y614 415 aa6.96□□□□□ -1.3
SPIDR-218ENST00000522222 DMDP11532 3685 aa6.96□□□□□ -1.3
SPIDR-218ENST00000522222 IGLV3-10A0A075B6K4 115 aa6.95□□□□□ -1.3
SPIDR-218ENST00000522222 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.95□□□□□ -1.3
SPIDR-218ENST00000522222 IGHV1OR15-9A0A0B4J2B8 117 aa6.95□□□□□ -1.3
SPIDR-218ENST00000522222 SIGLEC16A6NMB1 481 aa6.95□□□□□ -1.3
SPIDR-218ENST00000522222 E9PAM4 449 aa6.95□□□□□ -1.3
SPIDR-218ENST00000522222 RIPK2O43353 540 aa6.95□□□□□ -1.3
SPIDR-218ENST00000522222 SYNCRIPO60506 623 aaKnown RBP6.95□□□□□ -1.3
SPIDR-218ENST00000522222 CLDN11O75508 207 aa6.95□□□□□ -1.3
SPIDR-218ENST00000522222 ENDOD1O94919 500 aa6.95□□□□□ -1.3
SPIDR-218ENST00000522222 EPN2O95208 641 aa6.95□□□□□ -1.3
SPIDR-218ENST00000522222 ASLP04424 464 aa6.95□□□□□ -1.3
SPIDR-218ENST00000522222 ATP5BP06576 529 aaKnown RBP6.95□□□□□ -1.3
SPIDR-218ENST00000522222 EPHX1P07099 455 aa6.95□□□□□ -1.3
SPIDR-218ENST00000522222 RETP07949 1114 aa6.95□□□□□ -1.3
SPIDR-218ENST00000522222 POLR2EP19388 210 aaKnown RBP6.95□□□□□ -1.3
SPIDR-218ENST00000522222 MZF1P28698 734 aaPredicted RBP6.95□□□□□ -1.3
SPIDR-218ENST00000522222 HNRNPH1P31943 449 aaKnown RBP6.95□□□□□ -1.3
SPIDR-218ENST00000522222 STK19P49842 368 aaPredicted RBP6.95□□□□□ -1.3
SPIDR-218ENST00000522222 MNAT1P51948 309 aa6.95□□□□□ -1.3
SPIDR-218ENST00000522222 ZNF143P52747 638 aaPredicted RBP6.95□□□□□ -1.3
SPIDR-218ENST00000522222 COPAP53621 1224 aa6.95□□□□□ -1.3
SPIDR-218ENST00000522222 CDH4P55283 916 aa6.95□□□□□ -1.3
SPIDR-218ENST00000522222 ZNF252P-AS1Q0IIN9 211 aa6.95□□□□□ -1.3
SPIDR-218ENST00000522222 IFT88Q13099 833 aa6.95□□□□□ -1.3
SPIDR-218ENST00000522222 ZNF177Q13360 481 aaPredicted RBP6.95□□□□□ -1.3
SPIDR-218ENST00000522222 MAMLD1Q13495 774 aa6.95□□□□□ -1.3
SPIDR-218ENST00000522222 CAMK2GQ13555 558 aaPredicted RBP6.95□□□□□ -1.3
SPIDR-218ENST00000522222 PTK6Q13882 451 aa6.95□□□□□ -1.3
SPIDR-218ENST00000522222 MESDQ14696 234 aa6.95□□□□□ -1.3
SPIDR-218ENST00000522222 E2F5Q15329 346 aa6.95□□□□□ -1.3
SPIDR-218ENST00000522222 C5orf22Q49AR2 442 aa6.95□□□□□ -1.3
SPIDR-218ENST00000522222 USP39Q53GS9 565 aaKnown RBP6.95□□□□□ -1.3
SPIDR-218ENST00000522222 MANEALQ5VSG8 457 aa6.95□□□□□ -1.3
SPIDR-218ENST00000522222 TTC19Q6DKK2 380 aaPredicted RBP6.95□□□□□ -1.3
SPIDR-218ENST00000522222 PLEKHA7Q6IQ23 1121 aa6.95□□□□□ -1.3
SPIDR-218ENST00000522222 DCUN1D2Q6PH85 259 aa6.95□□□□□ -1.3
SPIDR-218ENST00000522222 ZDHHC24Q6UX98 284 aa6.95□□□□□ -1.3
SPIDR-218ENST00000522222 TFAP2DQ7Z6R9 452 aa6.95□□□□□ -1.3
SPIDR-218ENST00000522222 RELL1Q8IUW5 271 aa6.95□□□□□ -1.3
SPIDR-218ENST00000522222 CCDC13Q8IYE1 715 aa6.95□□□□□ -1.3
SPIDR-218ENST00000522222 CCDC185Q8N715 623 aa6.95□□□□□ -1.3
SPIDR-218ENST00000522222 FRMD1Q8N878 549 aa6.95□□□□□ -1.3
SPIDR-218ENST00000522222 PRELID2Q8N945 189 aa6.95□□□□□ -1.3
SPIDR-218ENST00000522222 CCDC89Q8N998 374 aa6.95□□□□□ -1.3
SPIDR-218ENST00000522222 OR2T3Q8NH03 318 aa6.95□□□□□ -1.3
SPIDR-218ENST00000522222 FBXO25Q8TCJ0 367 aa6.95□□□□□ -1.3
SPIDR-218ENST00000522222 CENPIQ92674 756 aaPredicted RBP6.95□□□□□ -1.3
SPIDR-218ENST00000522222 ALG3Q92685 438 aa6.95□□□□□ -1.3
SPIDR-218ENST00000522222 TTC17Q96AE7 1141 aa6.95□□□□□ -1.3
SPIDR-218ENST00000522222 GRAMD1AQ96CP6 724 aa6.95□□□□□ -1.3
SPIDR-218ENST00000522222 MYO19Q96H55 970 aa6.95□□□□□ -1.3
SPIDR-218ENST00000522222 SEC16BQ96JE7 1060 aa6.95□□□□□ -1.3
SPIDR-218ENST00000522222 MRGPRX3Q96LB0 322 aa6.95□□□□□ -1.3
SPIDR-218ENST00000522222 TTC25Q96NG3 672 aa6.95□□□□□ -1.3
SPIDR-218ENST00000522222 HAPLN3Q96S86 360 aa6.95□□□□□ -1.3
SPIDR-218ENST00000522222 CNPY3Q9BT09 278 aa6.95□□□□□ -1.3
SPIDR-218ENST00000522222 TRIM7Q9C029 511 aa6.95□□□□□ -1.3
SPIDR-218ENST00000522222 PHACTR1Q9C0D0 580 aa6.95□□□□□ -1.3
SPIDR-218ENST00000522222 MKRN2Q9H000 416 aaKnown RBP6.95□□□□□ -1.3
SPIDR-218ENST00000522222 DUSP15Q9H1R2 295 aaPredicted RBP6.95□□□□□ -1.3
SPIDR-218ENST00000522222 MTG2Q9H4K7 406 aa6.95□□□□□ -1.3
SPIDR-218ENST00000522222 GRHL1Q9NZI5 618 aa6.95□□□□□ -1.3
SPIDR-218ENST00000522222 MPP6Q9NZW5 540 aa6.95□□□□□ -1.3
SPIDR-218ENST00000522222 SENP1Q9P0U3 644 aa6.95□□□□□ -1.3
SPIDR-218ENST00000522222 KIAA1522Q9P206 1035 aaPredicted RBP6.95□□□□□ -1.3
SPIDR-218ENST00000522222 MBD1Q9UIS9 605 aaPredicted RBP6.95□□□□□ -1.3
SPIDR-218ENST00000522222 USP18Q9UMW8 372 aa6.95□□□□□ -1.3
SPIDR-218ENST00000522222 CYP8B1Q9UNU6 501 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms