RNA–Protein interactions for RNA: ENST00000522122.1

SYNPO-205, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNPO, Length 5,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-205ENST00000522122 TMEM26Q6ZUK4 368 aa13.97□□□□□ -0.17
SYNPO-205ENST00000522122 C18orf25Q96B23 403 aaPredicted RBP13.97□□□□□ -0.17
SYNPO-205ENST00000522122 ABHD8Q96I13 439 aa13.97□□□□□ -0.17
SYNPO-205ENST00000522122 CPXM1Q96SM3 734 aa13.97□□□□□ -0.17
SYNPO-205ENST00000522122 ROGDIQ9GZN7 287 aa13.97□□□□□ -0.17
SYNPO-205ENST00000522122 AAASQ9NRG9 546 aa13.97□□□□□ -0.17
SYNPO-205ENST00000522122 NRCAMQ92823 1304 aa13.96□□□□□ -0.17
SYNPO-205ENST00000522122 SNTNA6NMZ2 147 aa13.96□□□□□ -0.17
SYNPO-205ENST00000522122 YDJCA8MPS7 323 aa13.96□□□□□ -0.17
SYNPO-205ENST00000522122 GDF10P55107 478 aa13.96□□□□□ -0.17
SYNPO-205ENST00000522122 PPP1R26Q5T8A7 1209 aaPredicted RBP13.96□□□□□ -0.17
SYNPO-205ENST00000522122 GPSM1Q86YR5 675 aa13.96□□□□□ -0.17
SYNPO-205ENST00000522122 LGI2Q8N0V4 545 aa13.96□□□□□ -0.17
SYNPO-205ENST00000522122 ANAPC2Q9UJX6 822 aa13.96□□□□□ -0.17
SYNPO-205ENST00000522122 PEX1O43933 1283 aa13.96□□□□□ -0.17
SYNPO-205ENST00000522122 B4GALT4O60513 344 aa13.96□□□□□ -0.17
SYNPO-205ENST00000522122 PARNO95453 639 aaKnown RBP13.96□□□□□ -0.17
SYNPO-205ENST00000522122 EPHA3P29320 983 aa13.96□□□□□ -0.17
SYNPO-205ENST00000522122 ANXA11P50995 505 aaKnown RBP13.96□□□□□ -0.17
SYNPO-205ENST00000522122 CCDC142Q17RM4 750 aa13.96□□□□□ -0.17
SYNPO-205ENST00000522122 FAM171A1Q5VUB5 890 aa13.96□□□□□ -0.17
SYNPO-205ENST00000522122 C10orf107Q8IVU9 208 aa13.96□□□□□ -0.17
SYNPO-205ENST00000522122 NAT8LQ8N9F0 302 aa13.96□□□□□ -0.17
SYNPO-205ENST00000522122 TADA1Q96BN2 335 aa13.96□□□□□ -0.17
SYNPO-205ENST00000522122 MARK4Q96L34 752 aa13.96□□□□□ -0.17
SYNPO-205ENST00000522122 OMDQ99983 421 aa13.96□□□□□ -0.17
SYNPO-205ENST00000522122 UBA2Q9UBT2 640 aaPredicted RBP13.96□□□□□ -0.17
SYNPO-205ENST00000522122 LRRC42Q9Y546 428 aa13.96□□□□□ -0.17
SYNPO-205ENST00000522122 LYPLA1O75608 230 aaPredicted RBP13.96□□□□□ -0.17
SYNPO-205ENST00000522122 CABYRO75952 493 aa13.96□□□□□ -0.17
SYNPO-205ENST00000522122 GJB1P08034 283 aa13.96□□□□□ -0.17
SYNPO-205ENST00000522122 GRIA3P42263 894 aa13.96□□□□□ -0.17
SYNPO-205ENST00000522122 IL2P60568 153 aa13.96□□□□□ -0.17
SYNPO-205ENST00000522122 RAB10P61026 200 aa13.96□□□□□ -0.17
SYNPO-205ENST00000522122 LIPMQ5VYY2 423 aa13.96□□□□□ -0.17
SYNPO-205ENST00000522122 FAM45BPQ6NSW5 357 aa13.96□□□□□ -0.17
SYNPO-205ENST00000522122 ZCCHC7Q8N3Z6 543 aaKnown RBP13.96□□□□□ -0.17
SYNPO-205ENST00000522122 LRRC52Q8N7C0 313 aa13.96□□□□□ -0.17
SYNPO-205ENST00000522122 SLC35B2Q8TB61 432 aa13.96□□□□□ -0.17
SYNPO-205ENST00000522122 CRYGNQ8WXF5 182 aa13.96□□□□□ -0.17
SYNPO-205ENST00000522122 KLHL25Q9H0H3 589 aa13.96□□□□□ -0.17
SYNPO-205ENST00000522122 SEMA4BQ9NPR2 832 aaPredicted RBP13.96□□□□□ -0.17
SYNPO-205ENST00000522122 USE1Q9NZ43 259 aa13.96□□□□□ -0.17
SYNPO-205ENST00000522122 SLC25A13Q9UJS0 675 aa13.96□□□□□ -0.17
SYNPO-205ENST00000522122 ADM5C9JUS6 153 aa13.96□□□□□ -0.18
SYNPO-205ENST00000522122 LZTS3O60299 673 aaPredicted RBP13.96□□□□□ -0.18
SYNPO-205ENST00000522122 FAM155BO75949 473 aa13.96□□□□□ -0.18
SYNPO-205ENST00000522122 RTN3O95197 1032 aaPredicted RBP13.96□□□□□ -0.18
SYNPO-205ENST00000522122 TFEBP19484 476 aa13.96□□□□□ -0.18
SYNPO-205ENST00000522122 FGFR3P22607 806 aa13.96□□□□□ -0.18
SYNPO-205ENST00000522122 SQLEQ14534 574 aa13.96□□□□□ -0.18
SYNPO-205ENST00000522122 GSTCDQ8NEC7 633 aa13.96□□□□□ -0.18
SYNPO-205ENST00000522122 RDH11Q8TC12 318 aa13.96□□□□□ -0.18
SYNPO-205ENST00000522122 RORBQ92753 470 aa13.96□□□□□ -0.18
SYNPO-205ENST00000522122 CDCA5Q96FF9 252 aa13.96□□□□□ -0.18
SYNPO-205ENST00000522122 P2RY11Q96G91 374 aa13.96□□□□□ -0.18
SYNPO-205ENST00000522122 MRPL57Q9BQC6 102 aaKnown RBP13.96□□□□□ -0.18
SYNPO-205ENST00000522122 CATSPERZQ9NTU4 200 aa13.96□□□□□ -0.18
SYNPO-205ENST00000522122 FBXO5Q9UKT4 447 aa13.96□□□□□ -0.18
SYNPO-205ENST00000522122 DYRK1BQ9Y463 629 aa13.96□□□□□ -0.18
SYNPO-205ENST00000522122 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.95□□□□□ -0.18
SYNPO-205ENST00000522122 TRIM38O00635 465 aa13.95□□□□□ -0.18
SYNPO-205ENST00000522122 HS6ST1O60243 411 aa13.95□□□□□ -0.18
SYNPO-205ENST00000522122 ATG7O95352 703 aa13.95□□□□□ -0.18
SYNPO-205ENST00000522122 CST3P01034 146 aaPredicted RBP13.95□□□□□ -0.18
SYNPO-205ENST00000522122 LYNP07948 512 aa13.95□□□□□ -0.18
SYNPO-205ENST00000522122 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.95□□□□□ -0.18
SYNPO-205ENST00000522122 SLC39A12Q504Y0 691 aa13.95□□□□□ -0.18
SYNPO-205ENST00000522122 NECAB2Q7Z6G3 386 aa13.95□□□□□ -0.18
SYNPO-205ENST00000522122 PTGR2Q8N8N7 351 aaPredicted RBP13.95□□□□□ -0.18
SYNPO-205ENST00000522122 SLC4A11Q8NBS3 891 aa13.95□□□□□ -0.18
SYNPO-205ENST00000522122 SETD9Q8NE22 299 aa13.95□□□□□ -0.18
SYNPO-205ENST00000522122 SEPT8Q92599 483 aa13.95□□□□□ -0.18
SYNPO-205ENST00000522122 ZNF516Q92618 1163 aa13.95□□□□□ -0.18
SYNPO-205ENST00000522122 RTKNQ9BST9 563 aa13.95□□□□□ -0.18
SYNPO-205ENST00000522122 SDCBP2Q9H190 292 aa13.95□□□□□ -0.18
SYNPO-205ENST00000522122 SYBUQ9NX95 663 aa13.95□□□□□ -0.18
SYNPO-205ENST00000522122 MARCH2Q9P0N8 246 aa13.95□□□□□ -0.18
SYNPO-205ENST00000522122 SH3BP4Q9P0V3 963 aa13.95□□□□□ -0.18
SYNPO-205ENST00000522122 XPR1Q9UBH6 696 aa13.95□□□□□ -0.18
SYNPO-205ENST00000522122 TRPV2Q9Y5S1 764 aa13.95□□□□□ -0.18
SYNPO-205ENST00000522122 MYH1P12882 1939 aa13.95□□□□□ -0.18
SYNPO-205ENST00000522122 BCLAF3A2AJT9 711 aaKnown RBP13.95□□□□□ -0.18
SYNPO-205ENST00000522122 PTGES3LE9PB15 166 aa13.95□□□□□ -0.18
SYNPO-205ENST00000522122 PLSCR1O15162 318 aa13.95□□□□□ -0.18
SYNPO-205ENST00000522122 PGM3O95394 542 aa13.95□□□□□ -0.18
SYNPO-205ENST00000522122 HOXC6P09630 235 aa13.95□□□□□ -0.18
SYNPO-205ENST00000522122 EPB42P16452 691 aa13.95□□□□□ -0.18
SYNPO-205ENST00000522122 RPL5P46777 297 aaKnown RBP13.95□□□□□ -0.18
SYNPO-205ENST00000522122 FBXW4P57775 412 aa13.95□□□□□ -0.18
SYNPO-205ENST00000522122 BFSP2Q13515 415 aa13.95□□□□□ -0.18
SYNPO-205ENST00000522122 ACSBG2Q5FVE4 666 aa13.95□□□□□ -0.18
SYNPO-205ENST00000522122 CMC1Q7Z7K0 106 aa13.95□□□□□ -0.18
SYNPO-205ENST00000522122 EFCAB3Q8N7B9 438 aa13.95□□□□□ -0.18
SYNPO-205ENST00000522122 SPPL2AQ8TCT8 520 aa13.95□□□□□ -0.18
SYNPO-205ENST00000522122 FIZ1Q96SL8 496 aa13.95□□□□□ -0.18
SYNPO-205ENST00000522122 TTKP33981 857 aa13.95□□□□□ -0.18
SYNPO-205ENST00000522122 ARL2P36404 184 aa13.95□□□□□ -0.18
SYNPO-205ENST00000522122 PCBP1Q15365 356 aaKnown RBP eCLIP13.95□□□□□ -0.18
SYNPO-205ENST00000522122 IL27RAQ6UWB1 636 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms