RNA–Protein interactions for RNA: ENST00000521941.1

CTNNA1-231, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 224 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-231ENST00000521941 TM9SF3Q9HD45 589 aa8.5□□□□□ -1.05
CTNNA1-231ENST00000521941 AASDHPPTQ9NRN7 309 aa8.5□□□□□ -1.05
CTNNA1-231ENST00000521941 LHX3Q9UBR4 397 aa8.5□□□□□ -1.05
CTNNA1-231ENST00000521941 DOCK9Q9BZ29 2069 aa8.5□□□□□ -1.05
CTNNA1-231ENST00000521941 DMXL1Q9Y485 3027 aa8.5□□□□□ -1.05
CTNNA1-231ENST00000521941 A0A1B0GVT2 93 aa8.49□□□□□ -1.05
CTNNA1-231ENST00000521941 GOLGA6L6A8MZA4 724 aa8.49□□□□□ -1.05
CTNNA1-231ENST00000521941 SLC30A4O14863 429 aa8.49□□□□□ -1.05
CTNNA1-231ENST00000521941 PRAMEF11O60813 436 aa8.49□□□□□ -1.05
CTNNA1-231ENST00000521941 RNGTTO60942 597 aaKnown RBP8.49□□□□□ -1.05
CTNNA1-231ENST00000521941 PALMO75781 387 aa8.49□□□□□ -1.05
CTNNA1-231ENST00000521941 NDUFA10O95299 355 aa8.49□□□□□ -1.05
CTNNA1-231ENST00000521941 GSRP00390 522 aa8.49□□□□□ -1.05
CTNNA1-231ENST00000521941 SYPP08247 313 aa8.49□□□□□ -1.05
CTNNA1-231ENST00000521941 SERPINF2P08697 491 aa8.49□□□□□ -1.05
CTNNA1-231ENST00000521941 KRT7P08729 469 aa8.49□□□□□ -1.05
CTNNA1-231ENST00000521941 PRLRP16471 622 aa8.49□□□□□ -1.05
CTNNA1-231ENST00000521941 ITGB7P26010 798 aa8.49□□□□□ -1.05
CTNNA1-231ENST00000521941 CDC25BP30305 580 aa8.49□□□□□ -1.05
CTNNA1-231ENST00000521941 MAN1A1P33908 653 aa8.49□□□□□ -1.05
CTNNA1-231ENST00000521941 HOXD12P35452 270 aa8.49□□□□□ -1.05
CTNNA1-231ENST00000521941 RGRP47804 291 aa8.49□□□□□ -1.05
CTNNA1-231ENST00000521941 CSNK1EP49674 416 aaKnown RBP8.49□□□□□ -1.05
CTNNA1-231ENST00000521941 NEK3P51956 506 aa8.49□□□□□ -1.05
CTNNA1-231ENST00000521941 NAP1L1P55209 391 aaKnown RBP8.49□□□□□ -1.05
CTNNA1-231ENST00000521941 RAD51Q06609 339 aa8.49□□□□□ -1.05
CTNNA1-231ENST00000521941 ZNF235Q14590 738 aa8.49□□□□□ -1.05
CTNNA1-231ENST00000521941 PUM1Q14671 1186 aaKnown RBP eCLIP8.49□□□□□ -1.05
CTNNA1-231ENST00000521941 CYTH1Q15438 398 aa8.49□□□□□ -1.05
CTNNA1-231ENST00000521941 CFAP58Q5T655 872 aa8.49□□□□□ -1.05
CTNNA1-231ENST00000521941 PIP5KL1Q5T9C9 394 aa8.49□□□□□ -1.05
CTNNA1-231ENST00000521941 NCBP2-AS2Q69YL0 99 aa8.49□□□□□ -1.05
CTNNA1-231ENST00000521941 FBXL19Q6PCT2 694 aa8.49□□□□□ -1.05
CTNNA1-231ENST00000521941 SLC23A3Q6PIS1 610 aa8.49□□□□□ -1.05
CTNNA1-231ENST00000521941 RAD9BQ6WBX8 426 aa8.49□□□□□ -1.05
CTNNA1-231ENST00000521941 ERN2Q76MJ5 926 aaKnown RBP8.49□□□□□ -1.05
CTNNA1-231ENST00000521941 DGLUCYQ7Z3D6 616 aa8.49□□□□□ -1.05
CTNNA1-231ENST00000521941 CCDC170Q8IYT3 715 aa8.49□□□□□ -1.05
CTNNA1-231ENST00000521941 MINDY1Q8N5J2 469 aa8.49□□□□□ -1.05
CTNNA1-231ENST00000521941 TSEN2Q8NCE0 465 aaKnown RBP8.49□□□□□ -1.05
CTNNA1-231ENST00000521941 TMIEQ8NEW7 156 aa8.49□□□□□ -1.05
CTNNA1-231ENST00000521941 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.49□□□□□ -1.05
CTNNA1-231ENST00000521941 LRRN4Q8WUT4 740 aa8.49□□□□□ -1.05
CTNNA1-231ENST00000521941 CASKIN2Q8WXE0 1202 aa8.49□□□□□ -1.05
CTNNA1-231ENST00000521941 DNASE2BQ8WZ79 361 aa8.49□□□□□ -1.05
CTNNA1-231ENST00000521941 ISG20Q96AZ6 181 aaKnown RBP8.49□□□□□ -1.05
CTNNA1-231ENST00000521941 KLHL32Q96NJ5 620 aa8.49□□□□□ -1.05
CTNNA1-231ENST00000521941 PCED1AQ9H1Q7 454 aa8.49□□□□□ -1.05
CTNNA1-231ENST00000521941 EBF2Q9HAK2 575 aa8.49□□□□□ -1.05
CTNNA1-231ENST00000521941 CAPN10Q9HC96 672 aa8.49□□□□□ -1.05
CTNNA1-231ENST00000521941 FZD3Q9NPG1 666 aa8.49□□□□□ -1.05
CTNNA1-231ENST00000521941 LUC7LQ9NQ29 371 aaKnown RBP8.49□□□□□ -1.05
CTNNA1-231ENST00000521941 IPO11Q9UI26 975 aaKnown RBP8.49□□□□□ -1.05
CTNNA1-231ENST00000521941 LCMT1Q9UIC8 334 aa8.49□□□□□ -1.05
CTNNA1-231ENST00000521941 INTUQ9ULD6 942 aa8.49□□□□□ -1.05
CTNNA1-231ENST00000521941 ITM2BQ9Y287 266 aa8.49□□□□□ -1.05
CTNNA1-231ENST00000521941 TTLL3Q9Y4R7 772 aa8.49□□□□□ -1.05
CTNNA1-231ENST00000521941 PCDHA13Q9Y5I0 950 aa8.49□□□□□ -1.05
CTNNA1-231ENST00000521941 A0A1W2PPC4 97 aa8.48□□□□□ -1.05
CTNNA1-231ENST00000521941 A0A1W2PQU0 124 aa8.48□□□□□ -1.05
CTNNA1-231ENST00000521941 TTC24A2A3L6 582 aaPredicted RBP8.48□□□□□ -1.05
CTNNA1-231ENST00000521941 RCCD1A6NED2 376 aa8.48□□□□□ -1.05
CTNNA1-231ENST00000521941 C16orf96A6NNT2 1141 aa8.48□□□□□ -1.05
CTNNA1-231ENST00000521941 NEMP1O14524 444 aa8.48□□□□□ -1.05
CTNNA1-231ENST00000521941 ARHGAP33O14559 1287 aa8.48□□□□□ -1.05
CTNNA1-231ENST00000521941 CDX4O14627 284 aaPredicted RBP8.48□□□□□ -1.05
CTNNA1-231ENST00000521941 SLC31A1O15431 190 aa8.48□□□□□ -1.05
CTNNA1-231ENST00000521941 SLC7A4O43246 635 aa8.48□□□□□ -1.05
CTNNA1-231ENST00000521941 BUB1BO60566 1050 aaPredicted RBP8.48□□□□□ -1.05
CTNNA1-231ENST00000521941 GJB3O75712 270 aa8.48□□□□□ -1.05
CTNNA1-231ENST00000521941 MTA2O94776 668 aa8.48□□□□□ -1.05
CTNNA1-231ENST00000521941 POP4O95707 220 aaKnown RBP8.48□□□□□ -1.05
CTNNA1-231ENST00000521941 C7P10643 843 aa8.48□□□□□ -1.05
CTNNA1-231ENST00000521941 ADRB3P13945 408 aa8.48□□□□□ -1.05
CTNNA1-231ENST00000521941 COMTP21964 271 aa8.48□□□□□ -1.05
CTNNA1-231ENST00000521941 XPAP23025 273 aaPredicted RBP8.48□□□□□ -1.05
CTNNA1-231ENST00000521941 KDELR1P24390 212 aa8.48□□□□□ -1.05
CTNNA1-231ENST00000521941 CD27P26842 260 aa8.48□□□□□ -1.05
CTNNA1-231ENST00000521941 ABL2P42684 1182 aa8.48□□□□□ -1.05
CTNNA1-231ENST00000521941 HCAR3P49019 387 aa8.48□□□□□ -1.05
CTNNA1-231ENST00000521941 ARSEP51690 589 aa8.48□□□□□ -1.05
CTNNA1-231ENST00000521941 AFF3P51826 1226 aaKnown RBP8.48□□□□□ -1.05
CTNNA1-231ENST00000521941 TAS2R38P59533 333 aa8.48□□□□□ -1.05
CTNNA1-231ENST00000521941 DYNLT1P63172 113 aa8.48□□□□□ -1.05
CTNNA1-231ENST00000521941 IL10RBQ08334 325 aa8.48□□□□□ -1.05
CTNNA1-231ENST00000521941 CCDC15Q0P6D6 951 aa8.48□□□□□ -1.05
CTNNA1-231ENST00000521941 LBRQ14739 615 aaKnown RBP8.48□□□□□ -1.05
CTNNA1-231ENST00000521941 PDK2Q15119 407 aa8.48□□□□□ -1.05
CTNNA1-231ENST00000521941 LLGL1Q15334 1064 aa8.48□□□□□ -1.05
CTNNA1-231ENST00000521941 TEAD4Q15561 434 aa8.48□□□□□ -1.05
CTNNA1-231ENST00000521941 MYLK3Q32MK0 819 aa8.48□□□□□ -1.05
CTNNA1-231ENST00000521941 INO80DQ53TQ3 878 aaPredicted RBP8.48□□□□□ -1.05
CTNNA1-231ENST00000521941 ANKRD20A8PQ5CZ79 823 aa8.48□□□□□ -1.05
CTNNA1-231ENST00000521941 TMCO4Q5TGY1 634 aa8.48□□□□□ -1.05
CTNNA1-231ENST00000521941 AFMIDQ63HM1 303 aa8.48□□□□□ -1.05
CTNNA1-231ENST00000521941 SEL1L3Q68CR1 1132 aa8.48□□□□□ -1.05
CTNNA1-231ENST00000521941 GDPD4Q6W3E5 623 aa8.48□□□□□ -1.05
CTNNA1-231ENST00000521941 KIAA1328Q86T90 577 aa8.48□□□□□ -1.05
CTNNA1-231ENST00000521941 PRPF39Q86UA1 669 aaKnown RBP8.48□□□□□ -1.05
CTNNA1-231ENST00000521941 RFX6Q8HWS3 928 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms