RNA–Protein interactions for RNA: ENST00000521667.5

TRAPPC9-210, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 2,021 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-210ENST00000521667 HOXD9P28356 352 aaPredicted RBP18.7■□□□□ 0.58
TRAPPC9-210ENST00000521667 SERPINH1P50454 418 aaKnown RBP18.7■□□□□ 0.58
TRAPPC9-210ENST00000521667 SEPT6Q14141 434 aa18.7■□□□□ 0.58
TRAPPC9-210ENST00000521667 PPM1JQ5JR12 505 aa18.7■□□□□ 0.58
TRAPPC9-210ENST00000521667 N4BP2L1Q5TBK1 243 aaPredicted RBP18.7■□□□□ 0.58
TRAPPC9-210ENST00000521667 IL31Q6EBC2 164 aa18.7■□□□□ 0.58
TRAPPC9-210ENST00000521667 CHST9Q7L1S5 443 aa18.7■□□□□ 0.58
TRAPPC9-210ENST00000521667 C16orf59Q7L2K0 433 aa18.7■□□□□ 0.58
TRAPPC9-210ENST00000521667 CMC1Q7Z7K0 106 aa18.7■□□□□ 0.58
TRAPPC9-210ENST00000521667 ITIH5Q86UX2 942 aa18.7■□□□□ 0.58
TRAPPC9-210ENST00000521667 NUDCD3Q8IVD9 361 aa18.7■□□□□ 0.58
TRAPPC9-210ENST00000521667 CNTN4Q8IWV2 1026 aa18.7■□□□□ 0.58
TRAPPC9-210ENST00000521667 GBP7Q8N8V2 638 aaPredicted RBP18.7■□□□□ 0.58
TRAPPC9-210ENST00000521667 OR7D4Q8NG98 312 aa18.7■□□□□ 0.58
TRAPPC9-210ENST00000521667 OR52K2Q8NGK3 314 aa18.7■□□□□ 0.58
TRAPPC9-210ENST00000521667 C10orf82Q8WW14 230 aa18.7■□□□□ 0.58
TRAPPC9-210ENST00000521667 E2F7Q96AV8 911 aa18.7■□□□□ 0.58
TRAPPC9-210ENST00000521667 ZBP1Q9H171 429 aa18.7■□□□□ 0.58
TRAPPC9-210ENST00000521667 SLC2A6Q9UGQ3 507 aa18.7■□□□□ 0.58
TRAPPC9-210ENST00000521667 EMCNQ9ULC0 261 aa18.7■□□□□ 0.58
TRAPPC9-210ENST00000521667 PTPRSQ13332 1948 aa18.7■□□□□ 0.58
TRAPPC9-210ENST00000521667 TTC24A2A3L6 582 aaPredicted RBP18.69■□□□□ 0.58
TRAPPC9-210ENST00000521667 HEATR9A2RTY3 570 aa18.69■□□□□ 0.58
TRAPPC9-210ENST00000521667 F11P03951 625 aa18.69■□□□□ 0.58
TRAPPC9-210ENST00000521667 GSTA1P08263 222 aa18.69■□□□□ 0.58
TRAPPC9-210ENST00000521667 MBL2P11226 248 aaPredicted RBP18.69■□□□□ 0.58
TRAPPC9-210ENST00000521667 SCTRP47872 440 aa18.69■□□□□ 0.58
TRAPPC9-210ENST00000521667 ARCN1P48444 511 aaKnown RBP18.69■□□□□ 0.58
TRAPPC9-210ENST00000521667 SGSHP51688 502 aa18.69■□□□□ 0.58
TRAPPC9-210ENST00000521667 ATG16L1Q676U5 607 aa18.69■□□□□ 0.58
TRAPPC9-210ENST00000521667 KIAA0930Q6ICG6 404 aaPredicted RBP18.69■□□□□ 0.58
TRAPPC9-210ENST00000521667 RAB3IL1Q8TBN0 382 aa18.69■□□□□ 0.58
TRAPPC9-210ENST00000521667 WBP2Q969T9 261 aa18.69■□□□□ 0.58
TRAPPC9-210ENST00000521667 VPS39Q96JC1 886 aa18.69■□□□□ 0.58
TRAPPC9-210ENST00000521667 RANBP9Q96S59 729 aa18.69■□□□□ 0.58
TRAPPC9-210ENST00000521667 SEMA3CQ99985 751 aa18.69■□□□□ 0.58
TRAPPC9-210ENST00000521667 DDX50Q9BQ39 737 aaKnown RBP18.69■□□□□ 0.58
TRAPPC9-210ENST00000521667 ZNF334Q9HCZ1 680 aaPredicted RBP18.69■□□□□ 0.58
TRAPPC9-210ENST00000521667 NPHS2Q9NP85 383 aa18.69■□□□□ 0.58
TRAPPC9-210ENST00000521667 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.69■□□□□ 0.58
TRAPPC9-210ENST00000521667 A0A1B0GVM2 712 aa18.69■□□□□ 0.58
TRAPPC9-210ENST00000521667 TCAF2A6NFQ2 919 aa18.69■□□□□ 0.58
TRAPPC9-210ENST00000521667 ZBBXA8MT70 800 aa18.69■□□□□ 0.58
TRAPPC9-210ENST00000521667 MPOP05164 745 aa18.69■□□□□ 0.58
TRAPPC9-210ENST00000521667 CTSAP10619 480 aa18.69■□□□□ 0.58
TRAPPC9-210ENST00000521667 ARNTP27540 789 aa18.69■□□□□ 0.58
TRAPPC9-210ENST00000521667 HADHAP40939 763 aa18.69■□□□□ 0.58
TRAPPC9-210ENST00000521667 ABCG1P45844 678 aa18.69■□□□□ 0.58
TRAPPC9-210ENST00000521667 NUMBP49757 651 aa18.69■□□□□ 0.58
TRAPPC9-210ENST00000521667 OVGP1Q12889 678 aa18.69■□□□□ 0.58
TRAPPC9-210ENST00000521667 ZNF177Q13360 481 aaPredicted RBP18.69■□□□□ 0.58
TRAPPC9-210ENST00000521667 CNGA3Q16281 694 aa18.69■□□□□ 0.58
TRAPPC9-210ENST00000521667 DBN1Q16643 649 aa18.69■□□□□ 0.58
TRAPPC9-210ENST00000521667 UGP2Q16851 508 aa18.69■□□□□ 0.58
TRAPPC9-210ENST00000521667 C16orf46Q6P387 395 aa18.69■□□□□ 0.58
TRAPPC9-210ENST00000521667 HERC6Q8IVU3 1022 aa18.69■□□□□ 0.58
TRAPPC9-210ENST00000521667 BBS5Q8N3I7 341 aa18.69■□□□□ 0.58
TRAPPC9-210ENST00000521667 FITM2Q8N6M3 262 aa18.69■□□□□ 0.58
TRAPPC9-210ENST00000521667 ZNF398Q8TD17 642 aa18.69■□□□□ 0.58
TRAPPC9-210ENST00000521667 BADQ92934 168 aa18.69■□□□□ 0.58
TRAPPC9-210ENST00000521667 TRPC7Q9HCX4 862 aa18.69■□□□□ 0.58
TRAPPC9-210ENST00000521667 SMPD4Q9NXE4 827 aa18.69■□□□□ 0.58
TRAPPC9-210ENST00000521667 SLC12A4Q9UP95 1085 aa18.69■□□□□ 0.58
TRAPPC9-210ENST00000521667 SSX2IPQ9Y2D8 614 aa18.69■□□□□ 0.58
TRAPPC9-210ENST00000521667 LOC285095A0A1B0GVY8 99 aa18.68■□□□□ 0.58
TRAPPC9-210ENST00000521667 ILVBLA1L0T0 632 aa18.68■□□□□ 0.58
TRAPPC9-210ENST00000521667 MUSKO15146 869 aa18.68■□□□□ 0.58
TRAPPC9-210ENST00000521667 KDELR3O43731 214 aa18.68■□□□□ 0.58
TRAPPC9-210ENST00000521667 PLIN3O60664 434 aa18.68■□□□□ 0.58
TRAPPC9-210ENST00000521667 UBOX5O94941 541 aa18.68■□□□□ 0.58
TRAPPC9-210ENST00000521667 TGDSO95455 350 aa18.68■□□□□ 0.58
TRAPPC9-210ENST00000521667 RHOCP08134 193 aa18.68■□□□□ 0.58
TRAPPC9-210ENST00000521667 SPATA31D3P0C874 917 aa18.68■□□□□ 0.58
TRAPPC9-210ENST00000521667 ALDH3A1P30838 453 aa18.68■□□□□ 0.58
TRAPPC9-210ENST00000521667 CA8P35219 290 aa18.68■□□□□ 0.58
TRAPPC9-210ENST00000521667 OXCT1P55809 520 aa18.68■□□□□ 0.58
TRAPPC9-210ENST00000521667 TMPRSS15P98073 1019 aa18.68■□□□□ 0.58
TRAPPC9-210ENST00000521667 CCDC15Q0P6D6 951 aa18.68■□□□□ 0.58
TRAPPC9-210ENST00000521667 CHI3L2Q15782 390 aa18.68■□□□□ 0.58
TRAPPC9-210ENST00000521667 PABPC1LQ4VXU2 614 aaKnown RBP18.68■□□□□ 0.58
TRAPPC9-210ENST00000521667 SPATA31D4Q6ZUB0 917 aa18.68■□□□□ 0.58
TRAPPC9-210ENST00000521667 SETD3Q86TU7 594 aaPredicted RBP18.68■□□□□ 0.58
TRAPPC9-210ENST00000521667 ZC3HC1Q86WB0 502 aaKnown RBP18.68■□□□□ 0.58
TRAPPC9-210ENST00000521667 MICALL1Q8N3F8 863 aa18.68■□□□□ 0.58
TRAPPC9-210ENST00000521667 FIBCD1Q8N539 461 aa18.68■□□□□ 0.58
TRAPPC9-210ENST00000521667 PPM1EQ8WY54 764 aa18.68■□□□□ 0.58
TRAPPC9-210ENST00000521667 ZFRQ96KR1 1074 aaKnown RBP18.68■□□□□ 0.58
TRAPPC9-210ENST00000521667 SPON2Q9BUD6 331 aa18.68■□□□□ 0.58
TRAPPC9-210ENST00000521667 TRIM55Q9BYV6 548 aa18.68■□□□□ 0.58
TRAPPC9-210ENST00000521667 RHOJQ9H4E5 214 aa18.68■□□□□ 0.58
TRAPPC9-210ENST00000521667 IL21Q9HBE4 155 aa18.68■□□□□ 0.58
TRAPPC9-210ENST00000521667 STOML2Q9UJZ1 356 aa18.68■□□□□ 0.58
TRAPPC9-210ENST00000521667 CAPN7Q9Y6W3 813 aa18.68■□□□□ 0.58
TRAPPC9-210ENST00000521667 TSPAN3O60637 253 aa18.67■□□□□ 0.58
TRAPPC9-210ENST00000521667 SIN3BO75182 1162 aa18.67■□□□□ 0.58
TRAPPC9-210ENST00000521667 LATS1O95835 1130 aa18.67■□□□□ 0.58
TRAPPC9-210ENST00000521667 CNPP09543 421 aaKnown RBP18.67■□□□□ 0.58
TRAPPC9-210ENST00000521667 IRX4P78413 519 aa18.67■□□□□ 0.58
TRAPPC9-210ENST00000521667 SMAD3P84022 425 aaKnown RBP18.67■□□□□ 0.58
TRAPPC9-210ENST00000521667 BST1Q10588 318 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms