RNA–Protein interactions for RNA: ENST00000521621.5

CLK4-209, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 2,780 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-209ENST00000521621 TMEM52BQ4KMG9 183 aa9.6□□□□□ -0.87
CLK4-209ENST00000521621 TMEM259Q4ZIN3 620 aa9.6□□□□□ -0.87
CLK4-209ENST00000521621 PPP6R3Q5H9R7 873 aaPredicted RBP9.6□□□□□ -0.87
CLK4-209ENST00000521621 BRAT1Q6PJG6 821 aa9.6□□□□□ -0.87
CLK4-209ENST00000521621 DBX2Q6ZNG2 339 aa9.6□□□□□ -0.87
CLK4-209ENST00000521621 SYCE1Q8N0S2 351 aa9.6□□□□□ -0.87
CLK4-209ENST00000521621 LRRC57Q8N9N7 239 aa9.6□□□□□ -0.87
CLK4-209ENST00000521621 DENND6BQ8NEG7 585 aa9.6□□□□□ -0.87
CLK4-209ENST00000521621 ARRDC3Q96B67 414 aa9.6□□□□□ -0.87
CLK4-209ENST00000521621 OLFM3Q96PB7 478 aa9.6□□□□□ -0.87
CLK4-209ENST00000521621 NUDCD1Q96RS6 583 aa9.6□□□□□ -0.87
CLK4-209ENST00000521621 GPR27Q9NS67 375 aa9.6□□□□□ -0.87
CLK4-209ENST00000521621 HECAQ9UBI9 543 aaPredicted RBP9.6□□□□□ -0.87
CLK4-209ENST00000521621 IPO11Q9UI26 975 aaKnown RBP9.6□□□□□ -0.87
CLK4-209ENST00000521621 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.6□□□□□ -0.87
CLK4-209ENST00000521621 PCDHA3Q9Y5H8 950 aa9.6□□□□□ -0.87
CLK4-209ENST00000521621 ALG6Q9Y672 507 aa9.6□□□□□ -0.87
CLK4-209ENST00000521621 PLXNA2O75051 1894 aa9.6□□□□□ -0.87
CLK4-209ENST00000521621 CCDC66A2RUB6 948 aa9.6□□□□□ -0.87
CLK4-209ENST00000521621 VILLO15195 856 aa9.6□□□□□ -0.87
CLK4-209ENST00000521621 MATN3O15232 486 aa9.6□□□□□ -0.87
CLK4-209ENST00000521621 YKT6O15498 198 aa9.6□□□□□ -0.87
CLK4-209ENST00000521621 BUB1BO60566 1050 aaPredicted RBP9.6□□□□□ -0.87
CLK4-209ENST00000521621 IL1BP01584 269 aa9.6□□□□□ -0.87
CLK4-209ENST00000521621 VAV1P15498 845 aa9.6□□□□□ -0.87
CLK4-209ENST00000521621 TGM2P21980 687 aa9.6□□□□□ -0.87
CLK4-209ENST00000521621 AMPD1P23109 780 aa9.6□□□□□ -0.87
CLK4-209ENST00000521621 ACSL1P33121 698 aa9.6□□□□□ -0.87
CLK4-209ENST00000521621 GARSP41250 739 aaKnown RBP9.6□□□□□ -0.87
CLK4-209ENST00000521621 PTGER3P43115 390 aa9.6□□□□□ -0.87
CLK4-209ENST00000521621 TAS2R38P59533 333 aa9.6□□□□□ -0.87
CLK4-209ENST00000521621 RACK1P63244 317 aaKnown RBP9.6□□□□□ -0.87
CLK4-209ENST00000521621 IFI35P80217 286 aaPredicted RBP9.6□□□□□ -0.87
CLK4-209ENST00000521621 MESDQ14696 234 aa9.6□□□□□ -0.87
CLK4-209ENST00000521621 LBRQ14739 615 aaKnown RBP9.6□□□□□ -0.87
CLK4-209ENST00000521621 ZNF423Q2M1K9 1284 aa9.6□□□□□ -0.87
CLK4-209ENST00000521621 KCNT1Q5JUK3 1230 aa9.6□□□□□ -0.87
CLK4-209ENST00000521621 GDPD4Q6W3E5 623 aa9.6□□□□□ -0.87
CLK4-209ENST00000521621 SRLQ86TD4 932 aa9.6□□□□□ -0.87
CLK4-209ENST00000521621 DCP2Q8IU60 420 aaKnown RBP9.6□□□□□ -0.87
CLK4-209ENST00000521621 BBS5Q8N3I7 341 aa9.6□□□□□ -0.87
CLK4-209ENST00000521621 ZNF366Q8N895 744 aa9.6□□□□□ -0.87
CLK4-209ENST00000521621 IFT43Q96FT9 208 aa9.6□□□□□ -0.87
CLK4-209ENST00000521621 RBM41Q96IZ5 413 aaKnown RBP9.6□□□□□ -0.87
CLK4-209ENST00000521621 GPR174Q9BXC1 333 aa9.6□□□□□ -0.87
CLK4-209ENST00000521621 NUSAP1Q9BXS6 441 aaKnown RBP9.6□□□□□ -0.87
CLK4-209ENST00000521621 MTG2Q9H4K7 406 aa9.6□□□□□ -0.87
CLK4-209ENST00000521621 KCTD5Q9NXV2 234 aa9.6□□□□□ -0.87
CLK4-209ENST00000521621 HS3ST3A1Q9Y663 406 aa9.6□□□□□ -0.87
CLK4-209ENST00000521621 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.59□□□□□ -0.87
CLK4-209ENST00000521621 MIF4GDA9UHW6 222 aaKnown RBP9.59□□□□□ -0.87
CLK4-209ENST00000521621 AREL1O15033 823 aa9.59□□□□□ -0.87
CLK4-209ENST00000521621 HTRA2O43464 458 aaPredicted RBP9.59□□□□□ -0.87
CLK4-209ENST00000521621 MAGEC1O60732 1142 aa9.59□□□□□ -0.87
CLK4-209ENST00000521621 LEFTY1O75610 366 aa9.59□□□□□ -0.87
CLK4-209ENST00000521621 COMTP21964 271 aa9.59□□□□□ -0.87
CLK4-209ENST00000521621 PPIDQ08752 370 aaKnown RBP9.59□□□□□ -0.87
CLK4-209ENST00000521621 SPEM2Q0P670 501 aa9.59□□□□□ -0.87
CLK4-209ENST00000521621 CNTN1Q12860 1018 aa9.59□□□□□ -0.87
CLK4-209ENST00000521621 TFDP2Q14188 446 aa9.59□□□□□ -0.87
CLK4-209ENST00000521621 SETMARQ53H47 684 aaPredicted RBP9.59□□□□□ -0.87
CLK4-209ENST00000521621 NAPEPLDQ6IQ20 393 aa9.59□□□□□ -0.87
CLK4-209ENST00000521621 LINGO4Q6UY18 593 aa9.59□□□□□ -0.87
CLK4-209ENST00000521621 TMEFF1Q8IYR6 380 aa9.59□□□□□ -0.87
CLK4-209ENST00000521621 FRMD1Q8N878 549 aa9.59□□□□□ -0.87
CLK4-209ENST00000521621 HSPA12BQ96MM6 686 aa9.59□□□□□ -0.87
CLK4-209ENST00000521621 C6orf106Q9H6K1 298 aaPredicted RBP9.59□□□□□ -0.87
CLK4-209ENST00000521621 SP110Q9HB58 689 aa9.59□□□□□ -0.87
CLK4-209ENST00000521621 CD93Q9NPY3 652 aa9.59□□□□□ -0.87
CLK4-209ENST00000521621 SERGEFQ9UGK8 458 aa9.59□□□□□ -0.87
CLK4-209ENST00000521621 FCF1Q9Y324 198 aaKnown RBP9.59□□□□□ -0.87
CLK4-209ENST00000521621 FADS3Q9Y5Q0 445 aa9.59□□□□□ -0.87
CLK4-209ENST00000521621 MYO18AQ92614 2054 aaKnown RBP9.59□□□□□ -0.87
CLK4-209ENST00000521621 SPAG17Q6Q759 2223 aa9.59□□□□□ -0.87
CLK4-209ENST00000521621 A0A1W2PP55 124 aa9.59□□□□□ -0.87
CLK4-209ENST00000521621 MEI4A8MW99 385 aa9.59□□□□□ -0.87
CLK4-209ENST00000521621 GJB3O75712 270 aa9.59□□□□□ -0.87
CLK4-209ENST00000521621 RNASEH2AO75792 299 aaKnown RBP9.59□□□□□ -0.87
CLK4-209ENST00000521621 ADRB3P13945 408 aa9.59□□□□□ -0.87
CLK4-209ENST00000521621 CDKN2BP42772 138 aa9.59□□□□□ -0.87
CLK4-209ENST00000521621 RPL26P61254 145 aaKnown RBP9.59□□□□□ -0.87
CLK4-209ENST00000521621 RHOAP61586 193 aa9.59□□□□□ -0.87
CLK4-209ENST00000521621 CREB5Q02930 508 aa9.59□□□□□ -0.87
CLK4-209ENST00000521621 XRCC4Q13426 336 aa9.59□□□□□ -0.87
CLK4-209ENST00000521621 TEAD4Q15561 434 aa9.59□□□□□ -0.87
CLK4-209ENST00000521621 SMTNL2Q2TAL5 461 aa9.59□□□□□ -0.87
CLK4-209ENST00000521621 ARSIQ5FYB1 569 aa9.59□□□□□ -0.87
CLK4-209ENST00000521621 NCEH1Q6PIU2 408 aa9.59□□□□□ -0.87
CLK4-209ENST00000521621 OXR1Q8N573 874 aa9.59□□□□□ -0.87
CLK4-209ENST00000521621 ATPAF2Q8N5M1 289 aa9.59□□□□□ -0.87
CLK4-209ENST00000521621 CHST14Q8NCH0 376 aa9.59□□□□□ -0.87
CLK4-209ENST00000521621 SKA1Q96BD8 255 aa9.59□□□□□ -0.87
CLK4-209ENST00000521621 BIRC7Q96CA5 298 aa9.59□□□□□ -0.87
CLK4-209ENST00000521621 TBATAQ96M53 351 aa9.59□□□□□ -0.87
CLK4-209ENST00000521621 DYRK4Q9NR20 520 aa9.59□□□□□ -0.87
CLK4-209ENST00000521621 ETNK2Q9NVF9 386 aa9.59□□□□□ -0.87
CLK4-209ENST00000521621 RPL26L1Q9UNX3 145 aaKnown RBP9.59□□□□□ -0.87
CLK4-209ENST00000521621 ATP8A1Q9Y2Q0 1164 aa9.59□□□□□ -0.87
CLK4-209ENST00000521621 A0A1W2PR77 199 aa9.58□□□□□ -0.88
CLK4-209ENST00000521621 J3KR12 359 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms