RNA–Protein interactions for RNA: ENST00000521067.1

PABPC1-217, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-217ENST00000521067 FGF11Q92914 225 aa20.64■□□□□ 0.89
PABPC1-217ENST00000521067 ARHGEF2Q92974 986 aaKnown RBP20.64■□□□□ 0.89
PABPC1-217ENST00000521067 ISG20Q96AZ6 181 aaKnown RBP20.64■□□□□ 0.89
PABPC1-217ENST00000521067 IFT43Q96FT9 208 aa20.64■□□□□ 0.89
PABPC1-217ENST00000521067 C1QTNF2Q9BXJ5 285 aa20.64■□□□□ 0.89
PABPC1-217ENST00000521067 OSBPL2Q9H1P3 480 aa20.64■□□□□ 0.89
PABPC1-217ENST00000521067 ZDHHC6Q9H6R6 413 aa20.64■□□□□ 0.89
PABPC1-217ENST00000521067 NLGN3Q9NZ94 848 aa20.64■□□□□ 0.89
PABPC1-217ENST00000521067 DNAI1Q9UI46 699 aa20.64■□□□□ 0.89
PABPC1-217ENST00000521067 ITM2BQ9Y287 266 aa20.64■□□□□ 0.89
PABPC1-217ENST00000521067 C2CD4BA6NLJ0 364 aa20.63■□□□□ 0.89
PABPC1-217ENST00000521067 K7ESM1 405 aa20.63■□□□□ 0.89
PABPC1-217ENST00000521067 AP1G1O43747 822 aa20.63■□□□□ 0.89
PABPC1-217ENST00000521067 OPA1O60313 960 aa20.63■□□□□ 0.89
PABPC1-217ENST00000521067 CSF2P04141 144 aa20.63■□□□□ 0.89
PABPC1-217ENST00000521067 RHOQP17081 205 aa20.63■□□□□ 0.89
PABPC1-217ENST00000521067 CDR2Q01850 454 aa20.63■□□□□ 0.89
PABPC1-217ENST00000521067 RWDD4Q6NW29 188 aaKnown RBP20.63■□□□□ 0.89
PABPC1-217ENST00000521067 KYAT3Q6YP21 454 aaKnown RBP20.63■□□□□ 0.89
PABPC1-217ENST00000521067 ZNF677Q86XU0 584 aa20.63■□□□□ 0.89
PABPC1-217ENST00000521067 PLPP6Q8IY26 295 aa20.63■□□□□ 0.89
PABPC1-217ENST00000521067 MSANTD4Q8NCY6 345 aa20.63■□□□□ 0.89
PABPC1-217ENST00000521067 CENPIQ92674 756 aaPredicted RBP20.63■□□□□ 0.89
PABPC1-217ENST00000521067 PCDHB18PQ96TA0 734 aa20.63■□□□□ 0.89
PABPC1-217ENST00000521067 VPS16Q9H269 839 aa20.63■□□□□ 0.89
PABPC1-217ENST00000521067 TMEM248Q9NWD8 314 aa20.63■□□□□ 0.89
PABPC1-217ENST00000521067 CHMP5Q9NZZ3 219 aa20.63■□□□□ 0.89
PABPC1-217ENST00000521067 ATMQ13315 3056 aa20.62■□□□□ 0.89
PABPC1-217ENST00000521067 HELZ2Q9BYK8 2649 aaKnown RBP20.62■□□□□ 0.89
PABPC1-217ENST00000521067 SPTY2D1-AS1A0A0U1RR47 76 aa20.62■□□□□ 0.89
PABPC1-217ENST00000521067 C16orf96A6NNT2 1141 aa20.62■□□□□ 0.89
PABPC1-217ENST00000521067 LRIG2O94898 1065 aa20.62■□□□□ 0.89
PABPC1-217ENST00000521067 EEF1GP26641 437 aaKnown RBP20.62■□□□□ 0.89
PABPC1-217ENST00000521067 HDAC4P56524 1084 aa20.62■□□□□ 0.89
PABPC1-217ENST00000521067 JAM2P57087 298 aa20.62■□□□□ 0.89
PABPC1-217ENST00000521067 LRRC69Q6ZNQ3 347 aa20.62■□□□□ 0.89
PABPC1-217ENST00000521067 DCP2Q8IU60 420 aaKnown RBP20.62■□□□□ 0.89
PABPC1-217ENST00000521067 CCDC185Q8N715 623 aa20.62■□□□□ 0.89
PABPC1-217ENST00000521067 FAM181AQ8N9Y4 354 aa20.62■□□□□ 0.89
PABPC1-217ENST00000521067 NETO2Q8NC67 525 aa20.62■□□□□ 0.89
PABPC1-217ENST00000521067 FAM174AQ8TBP5 190 aa20.62■□□□□ 0.89
PABPC1-217ENST00000521067 LENG8Q96PV6 779 aaPredicted RBP20.62■□□□□ 0.89
PABPC1-217ENST00000521067 C11orf70Q9BRQ4 267 aa20.62■□□□□ 0.89
PABPC1-217ENST00000521067 DACH1Q9UI36 760 aa20.62■□□□□ 0.89
PABPC1-217ENST00000521067 CFAP46Q8IYW2 2715 aa20.61■□□□□ 0.89
PABPC1-217ENST00000521067 PRB1P04280 392 aa20.61■□□□□ 0.89
PABPC1-217ENST00000521067 PLEKP08567 350 aaPredicted RBP20.61■□□□□ 0.89
PABPC1-217ENST00000521067 UNGP13051 313 aaPredicted RBP20.61■□□□□ 0.89
PABPC1-217ENST00000521067 NME1P15531 152 aaKnown RBP20.61■□□□□ 0.89
PABPC1-217ENST00000521067 SDC4P31431 198 aa20.61■□□□□ 0.89
PABPC1-217ENST00000521067 MAPKAPK2P49137 400 aa20.61■□□□□ 0.89
PABPC1-217ENST00000521067 POLR2FP61218 127 aaKnown RBP20.61■□□□□ 0.89
PABPC1-217ENST00000521067 HNRNPKP61978 463 aaKnown RBP eCLIP20.61■□□□□ 0.89
PABPC1-217ENST00000521067 MYLK3Q32MK0 819 aa20.61■□□□□ 0.89
PABPC1-217ENST00000521067 TBC1D25Q3MII6 688 aa20.61■□□□□ 0.89
PABPC1-217ENST00000521067 HS1BP3Q53T59 392 aa20.61■□□□□ 0.89
PABPC1-217ENST00000521067 RYBPQ8N488 228 aaPredicted RBP20.61■□□□□ 0.89
PABPC1-217ENST00000521067 ZNF548Q8NEK5 533 aaPredicted RBP20.61■□□□□ 0.89
PABPC1-217ENST00000521067 NUP62CLQ9H1M0 184 aa20.61■□□□□ 0.89
PABPC1-217ENST00000521067 NOL6Q9H6R4 1146 aaKnown RBP20.61■□□□□ 0.89
PABPC1-217ENST00000521067 NLRC4Q9NPP4 1024 aa20.61■□□□□ 0.89
PABPC1-217ENST00000521067 FAM207AQ9NSI2 230 aaPredicted RBP20.61■□□□□ 0.89
PABPC1-217ENST00000521067 PNMA8BQ9ULN7 279 aaPredicted RBP20.61■□□□□ 0.89
PABPC1-217ENST00000521067 CXorf51AA0A1B0GTR3 108 aa20.6■□□□□ 0.89
PABPC1-217ENST00000521067 NEMP2A6NFY4 417 aa20.6■□□□□ 0.89
PABPC1-217ENST00000521067 KRIT1O00522 736 aa20.6■□□□□ 0.89
PABPC1-217ENST00000521067 RRP8O43159 456 aaKnown RBP20.6■□□□□ 0.89
PABPC1-217ENST00000521067 UGT2B4P06133 528 aa20.6■□□□□ 0.89
PABPC1-217ENST00000521067 ALPPL2P10696 532 aa20.6■□□□□ 0.89
PABPC1-217ENST00000521067 ITIH2P19823 946 aa20.6■□□□□ 0.89
PABPC1-217ENST00000521067 RFC1P35251 1148 aaPredicted RBP20.6■□□□□ 0.89
PABPC1-217ENST00000521067 SOX5P35711 763 aa20.6■□□□□ 0.89
PABPC1-217ENST00000521067 PTPN9P43378 593 aa20.6■□□□□ 0.89
PABPC1-217ENST00000521067 PFN3P60673 137 aa20.6■□□□□ 0.89
PABPC1-217ENST00000521067 EIF2B5Q13144 721 aaKnown RBP20.6■□□□□ 0.89
PABPC1-217ENST00000521067 SGCGQ13326 291 aa20.6■□□□□ 0.89
PABPC1-217ENST00000521067 KRT31Q15323 416 aa20.6■□□□□ 0.89
PABPC1-217ENST00000521067 ARL13BQ3SXY8 428 aa20.6■□□□□ 0.89
PABPC1-217ENST00000521067 ZNF805Q5CZA5 627 aa20.6■□□□□ 0.89
PABPC1-217ENST00000521067 ATXN7L2Q5T6C5 722 aaPredicted RBP20.6■□□□□ 0.89
PABPC1-217ENST00000521067 CDKAL1Q5VV42 579 aa20.6■□□□□ 0.89
PABPC1-217ENST00000521067 STRADAQ7RTN6 431 aa20.6■□□□□ 0.89
PABPC1-217ENST00000521067 PYROXD2Q8N2H3 581 aa20.6■□□□□ 0.89
PABPC1-217ENST00000521067 ENOX1Q8TC92 643 aaKnown RBP20.6■□□□□ 0.89
PABPC1-217ENST00000521067 KLC2Q9H0B6 622 aa20.6■□□□□ 0.89
PABPC1-217ENST00000521067 MAGEH1Q9H213 219 aa20.6■□□□□ 0.89
PABPC1-217ENST00000521067 AREL1O15033 823 aa20.59■□□□□ 0.89
PABPC1-217ENST00000521067 TSPAN6O43657 245 aa20.59■□□□□ 0.89
PABPC1-217ENST00000521067 GSRP00390 522 aa20.59■□□□□ 0.89
PABPC1-217ENST00000521067 MPOP05164 745 aa20.59■□□□□ 0.89
PABPC1-217ENST00000521067 RABIFP47224 123 aa20.59■□□□□ 0.89
PABPC1-217ENST00000521067 CCDC173Q0VFZ6 552 aa20.59■□□□□ 0.89
PABPC1-217ENST00000521067 PDE1CQ14123 709 aaPredicted RBP20.59■□□□□ 0.89
PABPC1-217ENST00000521067 CT47A1Q5JQC4 288 aaPredicted RBP20.59■□□□□ 0.89
PABPC1-217ENST00000521067 LRRC73Q5JTD7 316 aa20.59■□□□□ 0.89
PABPC1-217ENST00000521067 PARGQ86W56 976 aa20.59■□□□□ 0.89
PABPC1-217ENST00000521067 OR2AP1Q8NGE2 309 aa20.59■□□□□ 0.89
PABPC1-217ENST00000521067 FAM172AQ8WUF8 416 aa20.59■□□□□ 0.89
PABPC1-217ENST00000521067 ASB12Q8WXK4 309 aa20.59■□□□□ 0.89
PABPC1-217ENST00000521067 BAP1Q92560 729 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms