RNA–Protein interactions for RNA: ENST00000520946.1

MRPS28-206, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 5

Gene MRPS28, Length 411 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-206ENST00000520946 HECAQ9UBI9 543 aaPredicted RBP11.72□□□□□ -0.53
MRPS28-206ENST00000520946 PADI4Q9UM07 663 aa11.72□□□□□ -0.53
MRPS28-206ENST00000520946 HPCAL4Q9UM19 191 aa11.72□□□□□ -0.53
MRPS28-206ENST00000520946 CNTN6Q9UQ52 1028 aa11.72□□□□□ -0.53
MRPS28-206ENST00000520946 CTNND2Q9UQB3 1225 aa11.72□□□□□ -0.53
MRPS28-206ENST00000520946 FADS3Q9Y5Q0 445 aa11.72□□□□□ -0.53
MRPS28-206ENST00000520946 U3KQA8 63 aa11.72□□□□□ -0.53
MRPS28-206ENST00000520946 SMG1Q96Q15 3661 aaKnown RBP11.71□□□□□ -0.53
MRPS28-206ENST00000520946 TRPM6Q9BX84 2022 aa11.71□□□□□ -0.53
MRPS28-206ENST00000520946 CDRT15L2A8MXV6 281 aa11.71□□□□□ -0.53
MRPS28-206ENST00000520946 PLD2O14939 933 aa11.71□□□□□ -0.53
MRPS28-206ENST00000520946 RAD51BO15315 384 aa11.71□□□□□ -0.53
MRPS28-206ENST00000520946 JMJD7P0C870 316 aa11.71□□□□□ -0.53
MRPS28-206ENST00000520946 XPAP23025 273 aaPredicted RBP11.71□□□□□ -0.53
MRPS28-206ENST00000520946 BLKP51451 505 aa11.71□□□□□ -0.53
MRPS28-206ENST00000520946 CCNHP51946 323 aaPredicted RBP11.71□□□□□ -0.53
MRPS28-206ENST00000520946 PPARDQ03181 441 aa11.71□□□□□ -0.53
MRPS28-206ENST00000520946 CLN3Q13286 438 aa11.71□□□□□ -0.53
MRPS28-206ENST00000520946 EIF3IQ13347 325 aaKnown RBP11.71□□□□□ -0.53
MRPS28-206ENST00000520946 EIF4EBP2Q13542 120 aaPredicted RBP11.71□□□□□ -0.53
MRPS28-206ENST00000520946 POLD3Q15054 466 aaPredicted RBP11.71□□□□□ -0.53
MRPS28-206ENST00000520946 ARL13BQ3SXY8 428 aa11.71□□□□□ -0.53
MRPS28-206ENST00000520946 PERM1Q5SV97 790 aa11.71□□□□□ -0.53
MRPS28-206ENST00000520946 XKR5Q6UX68 686 aa11.71□□□□□ -0.53
MRPS28-206ENST00000520946 ATG14Q6ZNE5 492 aa11.71□□□□□ -0.53
MRPS28-206ENST00000520946 VPS36Q86VN1 386 aa11.71□□□□□ -0.53
MRPS28-206ENST00000520946 ZNF354CQ86Y25 554 aa11.71□□□□□ -0.53
MRPS28-206ENST00000520946 PHACTR4Q8IZ21 702 aa11.71□□□□□ -0.53
MRPS28-206ENST00000520946 FMR1NBQ8N0W7 255 aaPredicted RBP11.71□□□□□ -0.53
MRPS28-206ENST00000520946 OR7D4Q8NG98 312 aa11.71□□□□□ -0.53
MRPS28-206ENST00000520946 PRR11Q96HE9 360 aaPredicted RBP11.71□□□□□ -0.53
MRPS28-206ENST00000520946 LENG8Q96PV6 779 aaPredicted RBP11.71□□□□□ -0.53
MRPS28-206ENST00000520946 GFM1Q96RP9 751 aaKnown RBP11.71□□□□□ -0.53
MRPS28-206ENST00000520946 CRACR2AQ9BSW2 395 aa11.71□□□□□ -0.53
MRPS28-206ENST00000520946 TRIM4Q9C037 500 aa11.71□□□□□ -0.53
MRPS28-206ENST00000520946 ACP6Q9NPH0 428 aa11.71□□□□□ -0.53
MRPS28-206ENST00000520946 SIRPGQ9P1W8 387 aa11.71□□□□□ -0.53
MRPS28-206ENST00000520946 IL17BQ9UHF5 180 aa11.71□□□□□ -0.53
MRPS28-206ENST00000520946 PCDHB11Q9Y5F2 797 aa11.71□□□□□ -0.53
MRPS28-206ENST00000520946 ILVBLA1L0T0 632 aa11.7□□□□□ -0.54
MRPS28-206ENST00000520946 C16orf96A6NNT2 1141 aa11.7□□□□□ -0.54
MRPS28-206ENST00000520946 KRIT1O00522 736 aa11.7□□□□□ -0.54
MRPS28-206ENST00000520946 AP1G1O43747 822 aa11.7□□□□□ -0.54
MRPS28-206ENST00000520946 SLC5A2P31639 672 aa11.7□□□□□ -0.54
MRPS28-206ENST00000520946 ETFBP38117 255 aa11.7□□□□□ -0.54
MRPS28-206ENST00000520946 SERPINH1P50454 418 aaKnown RBP11.7□□□□□ -0.54
MRPS28-206ENST00000520946 STX17P56962 302 aa11.7□□□□□ -0.54
MRPS28-206ENST00000520946 GEMIN4P57678 1058 aaKnown RBP11.7□□□□□ -0.54
MRPS28-206ENST00000520946 RAD51Q06609 339 aa11.7□□□□□ -0.54
MRPS28-206ENST00000520946 DRAP1Q14919 205 aaPredicted RBP11.7□□□□□ -0.54
MRPS28-206ENST00000520946 ELOCQ15369 112 aa11.7□□□□□ -0.54
MRPS28-206ENST00000520946 C5orf22Q49AR2 442 aa11.7□□□□□ -0.54
MRPS28-206ENST00000520946 ZNF783Q6ZMS7 281 aa11.7□□□□□ -0.54
MRPS28-206ENST00000520946 RAB11FIP2Q7L804 512 aa11.7□□□□□ -0.54
MRPS28-206ENST00000520946 SLC26A9Q7LBE3 791 aa11.7□□□□□ -0.54
MRPS28-206ENST00000520946 CLEC14AQ86T13 490 aa11.7□□□□□ -0.54
MRPS28-206ENST00000520946 TTC7BQ86TV6 843 aa11.7□□□□□ -0.54
MRPS28-206ENST00000520946 ZDHHC17Q8IUH5 632 aa11.7□□□□□ -0.54
MRPS28-206ENST00000520946 RBFAQ8N0V3 343 aa11.7□□□□□ -0.54
MRPS28-206ENST00000520946 C1orf131Q8NDD1 294 aaKnown RBP11.7□□□□□ -0.54
MRPS28-206ENST00000520946 DENND6BQ8NEG7 585 aa11.7□□□□□ -0.54
MRPS28-206ENST00000520946 CXorf40AQ8TE69 158 aa11.7□□□□□ -0.54
MRPS28-206ENST00000520946 SGF29Q96ES7 293 aa11.7□□□□□ -0.54
MRPS28-206ENST00000520946 TMEM74Q96NL1 305 aa11.7□□□□□ -0.54
MRPS28-206ENST00000520946 BOCQ9BWV1 1114 aa11.7□□□□□ -0.54
MRPS28-206ENST00000520946 C1QTNF2Q9BXJ5 285 aa11.7□□□□□ -0.54
MRPS28-206ENST00000520946 TM6SF2Q9BZW4 377 aa11.7□□□□□ -0.54
MRPS28-206ENST00000520946 ASH1LQ9NR48 2969 aaKnown RBP11.7□□□□□ -0.54
MRPS28-206ENST00000520946 PIGVQ9NUD9 493 aa11.7□□□□□ -0.54
MRPS28-206ENST00000520946 ARHGEF38Q9NXL2 777 aa11.7□□□□□ -0.54
MRPS28-206ENST00000520946 SEPT3Q9UH03 358 aa11.7□□□□□ -0.54
MRPS28-206ENST00000520946 KLF15Q9UIH9 416 aa11.7□□□□□ -0.54
MRPS28-206ENST00000520946 ATXN7L1Q9ULK2 861 aaPredicted RBP11.7□□□□□ -0.54
MRPS28-206ENST00000520946 FCF1Q9Y324 198 aaKnown RBP11.7□□□□□ -0.54
MRPS28-206ENST00000520946 SNX10Q9Y5X0 201 aa11.7□□□□□ -0.54
MRPS28-206ENST00000520946 WASF2Q9Y6W5 498 aa11.7□□□□□ -0.54
MRPS28-206ENST00000520946 DRGXA6NNA5 263 aa11.69□□□□□ -0.54
MRPS28-206ENST00000520946 LMO7DNF2Z398 122 aa11.69□□□□□ -0.54
MRPS28-206ENST00000520946 YY2O15391 372 aa11.69□□□□□ -0.54
MRPS28-206ENST00000520946 LZTS3O60299 673 aaPredicted RBP11.69□□□□□ -0.54
MRPS28-206ENST00000520946 TM7SF2O76062 418 aa11.69□□□□□ -0.54
MRPS28-206ENST00000520946 ERBB2P04626 1255 aa11.69□□□□□ -0.54
MRPS28-206ENST00000520946 ALPIP09923 528 aa11.69□□□□□ -0.54
MRPS28-206ENST00000520946 HTR1BP28222 390 aa11.69□□□□□ -0.54
MRPS28-206ENST00000520946 CXCR3P49682 368 aa11.69□□□□□ -0.54
MRPS28-206ENST00000520946 SNRPD1P62314 119 aaKnown RBP11.69□□□□□ -0.54
MRPS28-206ENST00000520946 YPEL5P62699 121 aa11.69□□□□□ -0.54
MRPS28-206ENST00000520946 GNA12Q03113 381 aa11.69□□□□□ -0.54
MRPS28-206ENST00000520946 EIF2B5Q13144 721 aaKnown RBP11.69□□□□□ -0.54
MRPS28-206ENST00000520946 PAK1Q13153 545 aa11.69□□□□□ -0.54
MRPS28-206ENST00000520946 FGL2Q14314 439 aa11.69□□□□□ -0.54
MRPS28-206ENST00000520946 TCEA2Q15560 299 aa11.69□□□□□ -0.54
MRPS28-206ENST00000520946 ZNF805Q5CZA5 627 aa11.69□□□□□ -0.54
MRPS28-206ENST00000520946 MANEAQ5SRI9 462 aa11.69□□□□□ -0.54
MRPS28-206ENST00000520946 RWDD4Q6NW29 188 aaKnown RBP11.69□□□□□ -0.54
MRPS28-206ENST00000520946 TTI2Q6NXR4 508 aa11.69□□□□□ -0.54
MRPS28-206ENST00000520946 GJB7Q6PEY0 223 aa11.69□□□□□ -0.54
MRPS28-206ENST00000520946 OLFML1Q6UWY5 402 aa11.69□□□□□ -0.54
MRPS28-206ENST00000520946 GBP6Q6ZN66 633 aa11.69□□□□□ -0.54
MRPS28-206ENST00000520946 PARS2Q7L3T8 475 aaKnown RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms