RNA–Protein interactions for RNA: ENST00000520878.5

CLK4-206, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,722 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-206ENST00000520878 CINPQ9BW66 212 aaPredicted RBP11.5□□□□□ -0.57
CLK4-206ENST00000520878 UNC93B1Q9H1C4 597 aa11.5□□□□□ -0.57
CLK4-206ENST00000520878 WDR55Q9H6Y2 383 aaPredicted RBP11.5□□□□□ -0.57
CLK4-206ENST00000520878 ATP13A1Q9HD20 1204 aa11.5□□□□□ -0.57
CLK4-206ENST00000520878 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.5□□□□□ -0.57
CLK4-206ENST00000520878 H0Y626 953 aa11.5□□□□□ -0.57
CLK4-206ENST00000520878 MAFKO60675 156 aa11.5□□□□□ -0.57
CLK4-206ENST00000520878 FKTNO75072 461 aa11.5□□□□□ -0.57
CLK4-206ENST00000520878 DLDP09622 509 aaKnown RBP11.5□□□□□ -0.57
CLK4-206ENST00000520878 MBL2P11226 248 aaPredicted RBP11.5□□□□□ -0.57
CLK4-206ENST00000520878 CCND1P24385 295 aa11.5□□□□□ -0.57
CLK4-206ENST00000520878 CCR10P46092 362 aa11.5□□□□□ -0.57
CLK4-206ENST00000520878 ELAVL2Q12926 359 aaKnown RBP11.5□□□□□ -0.57
CLK4-206ENST00000520878 PEX6Q13608 980 aa11.5□□□□□ -0.57
CLK4-206ENST00000520878 GALNTL6Q49A17 601 aa11.5□□□□□ -0.57
CLK4-206ENST00000520878 FAM13CQ8NE31 585 aa11.5□□□□□ -0.57
CLK4-206ENST00000520878 SCG3Q8WXD2 468 aaKnown RBP11.5□□□□□ -0.57
CLK4-206ENST00000520878 ARHGEF3Q9NR81 526 aa11.5□□□□□ -0.57
CLK4-206ENST00000520878 KCTD3Q9Y597 815 aa11.5□□□□□ -0.57
CLK4-206ENST00000520878 TYW5A2RUC4 315 aaKnown RBP11.49□□□□□ -0.57
CLK4-206ENST00000520878 MTMR11A4FU01 709 aa11.49□□□□□ -0.57
CLK4-206ENST00000520878 OR6C75A6NL08 312 aa11.49□□□□□ -0.57
CLK4-206ENST00000520878 ZNF189O75820 626 aaPredicted RBP11.49□□□□□ -0.57
CLK4-206ENST00000520878 MPOP05164 745 aa11.49□□□□□ -0.57
CLK4-206ENST00000520878 RHOCP08134 193 aa11.49□□□□□ -0.57
CLK4-206ENST00000520878 SLC25A3Q00325 362 aa11.49□□□□□ -0.57
CLK4-206ENST00000520878 LRRC36Q1X8D7 754 aa11.49□□□□□ -0.57
CLK4-206ENST00000520878 CCDC153Q494R4 210 aa11.49□□□□□ -0.57
CLK4-206ENST00000520878 ACCSLQ4AC99 568 aa11.49□□□□□ -0.57
CLK4-206ENST00000520878 ANKS3Q6ZW76 656 aa11.49□□□□□ -0.57
CLK4-206ENST00000520878 TAS2R42Q7RTR8 314 aa11.49□□□□□ -0.57
CLK4-206ENST00000520878 ZNF598Q86UK7 904 aaKnown RBP11.49□□□□□ -0.57
CLK4-206ENST00000520878 TMEM173Q86WV6 379 aaPredicted RBP11.49□□□□□ -0.57
CLK4-206ENST00000520878 SPPL2BQ8TCT7 592 aa11.49□□□□□ -0.57
CLK4-206ENST00000520878 ZBED2Q9BTP6 218 aa11.49□□□□□ -0.57
CLK4-206ENST00000520878 UBE2OQ9C0C9 1292 aaKnown RBP11.49□□□□□ -0.57
CLK4-206ENST00000520878 C20orf27Q9GZN8 174 aa11.49□□□□□ -0.57
CLK4-206ENST00000520878 TLR6Q9Y2C9 796 aa11.49□□□□□ -0.57
CLK4-206ENST00000520878 ACTL7AQ9Y615 435 aa11.49□□□□□ -0.57
CLK4-206ENST00000520878 MGAMO43451 1857 aa11.49□□□□□ -0.57
CLK4-206ENST00000520878 NEMP2A6NFY4 417 aa11.49□□□□□ -0.57
CLK4-206ENST00000520878 SYN3O14994 580 aa11.49□□□□□ -0.57
CLK4-206ENST00000520878 MGRN1O60291 552 aa11.49□□□□□ -0.57
CLK4-206ENST00000520878 SERPINF2P08697 491 aa11.49□□□□□ -0.57
CLK4-206ENST00000520878 HNRNPLP14866 589 aaKnown RBP eCLIP11.49□□□□□ -0.57
CLK4-206ENST00000520878 RHOQP17081 205 aa11.49□□□□□ -0.57
CLK4-206ENST00000520878 CDC25CP30307 473 aa11.49□□□□□ -0.57
CLK4-206ENST00000520878 MAGEA3P43357 314 aa11.49□□□□□ -0.57
CLK4-206ENST00000520878 GRIA4P48058 902 aa11.49□□□□□ -0.57
CLK4-206ENST00000520878 OXCT1P55809 520 aa11.49□□□□□ -0.57
CLK4-206ENST00000520878 SLC12A1Q13621 1099 aa11.49□□□□□ -0.57
CLK4-206ENST00000520878 KPNB1Q14974 876 aaKnown RBP11.49□□□□□ -0.57
CLK4-206ENST00000520878 CNSTQ6PJW8 725 aa11.49□□□□□ -0.57
CLK4-206ENST00000520878 LINGO4Q6UY18 593 aa11.49□□□□□ -0.57
CLK4-206ENST00000520878 RINLQ6ZS11 566 aa11.49□□□□□ -0.57
CLK4-206ENST00000520878 MICAL1Q8TDZ2 1067 aa11.49□□□□□ -0.57
CLK4-206ENST00000520878 ZNF296Q8WUU4 475 aaPredicted RBP11.49□□□□□ -0.57
CLK4-206ENST00000520878 PGAP3Q96FM1 320 aaPredicted RBP11.49□□□□□ -0.57
CLK4-206ENST00000520878 FUBP3Q96I24 572 aaKnown RBP eCLIP11.49□□□□□ -0.57
CLK4-206ENST00000520878 ZCWPW1Q9H0M4 648 aa11.49□□□□□ -0.57
CLK4-206ENST00000520878 RHOJQ9H4E5 214 aa11.49□□□□□ -0.57
CLK4-206ENST00000520878 NSMCE4AQ9NXX6 385 aa11.49□□□□□ -0.57
CLK4-206ENST00000520878 PLK2Q9NYY3 685 aa11.49□□□□□ -0.57
CLK4-206ENST00000520878 SCML2Q9UQR0 700 aa11.49□□□□□ -0.57
CLK4-206ENST00000520878 HEATR9A2RTY3 570 aa11.49□□□□□ -0.57
CLK4-206ENST00000520878 A8MX80 341 aa11.49□□□□□ -0.57
CLK4-206ENST00000520878 BIRC5O15392 142 aa11.49□□□□□ -0.57
CLK4-206ENST00000520878 SUPT7LO94864 414 aa11.49□□□□□ -0.57
CLK4-206ENST00000520878 CCDC166P0CW27 439 aa11.49□□□□□ -0.57
CLK4-206ENST00000520878 EPHA3P29320 983 aa11.49□□□□□ -0.57
CLK4-206ENST00000520878 TAS2R39P59534 338 aa11.49□□□□□ -0.57
CLK4-206ENST00000520878 NIPAL4Q0D2K0 466 aa11.49□□□□□ -0.57
CLK4-206ENST00000520878 SEMA3BQ13214 749 aa11.49□□□□□ -0.57
CLK4-206ENST00000520878 RCN1Q15293 331 aa11.49□□□□□ -0.57
CLK4-206ENST00000520878 MMEL1Q495T6 779 aa11.49□□□□□ -0.57
CLK4-206ENST00000520878 TRIM67Q6ZTA4 783 aa11.49□□□□□ -0.57
CLK4-206ENST00000520878 ACAD11Q709F0 780 aa11.49□□□□□ -0.57
CLK4-206ENST00000520878 TMC7Q7Z402 723 aa11.49□□□□□ -0.57
CLK4-206ENST00000520878 ZNF781Q8N8C0 355 aa11.49□□□□□ -0.57
CLK4-206ENST00000520878 ZNF398Q8TD17 642 aa11.49□□□□□ -0.57
CLK4-206ENST00000520878 TBATAQ96M53 351 aa11.49□□□□□ -0.57
CLK4-206ENST00000520878 FCRL5Q96RD9 977 aa11.49□□□□□ -0.57
CLK4-206ENST00000520878 OXCT2Q9BYC2 517 aaPredicted RBP11.49□□□□□ -0.57
CLK4-206ENST00000520878 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.49□□□□□ -0.57
CLK4-206ENST00000520878 SAR1AQ9NR31 198 aa11.49□□□□□ -0.57
CLK4-206ENST00000520878 OLA1Q9NTK5 396 aaKnown RBP11.49□□□□□ -0.57
CLK4-206ENST00000520878 ZCWPW2A0A1B0GU75 182 aa11.48□□□□□ -0.57
CLK4-206ENST00000520878 HOXA2O43364 376 aa11.48□□□□□ -0.57
CLK4-206ENST00000520878 NBNO60934 754 aa11.48□□□□□ -0.57
CLK4-206ENST00000520878 CKMP06732 381 aa11.48□□□□□ -0.57
CLK4-206ENST00000520878 CHRNGP07510 517 aa11.48□□□□□ -0.57
CLK4-206ENST00000520878 SP100P23497 879 aaPredicted RBP11.48□□□□□ -0.57
CLK4-206ENST00000520878 MPSTP25325 297 aa11.48□□□□□ -0.57
CLK4-206ENST00000520878 NAB1Q13506 487 aa11.48□□□□□ -0.57
CLK4-206ENST00000520878 BTG3Q14201 252 aaPredicted RBP11.48□□□□□ -0.57
CLK4-206ENST00000520878 FAM83EQ2M2I3 478 aa11.48□□□□□ -0.57
CLK4-206ENST00000520878 SPDYAQ5MJ70 313 aa11.48□□□□□ -0.57
CLK4-206ENST00000520878 TMEM135Q86UB9 458 aa11.48□□□□□ -0.57
CLK4-206ENST00000520878 ARHGAP12Q8IWW6 846 aa11.48□□□□□ -0.57
CLK4-206ENST00000520878 LINC01599Q8WXQ3 324 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms