RNA–Protein interactions for RNA: ENST00000520267.5

COL13A1-213, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-213ENST00000520267 BPTFQ12830 3046 aa26.05■■□□□ 1.76
COL13A1-213ENST00000520267 OR6C75A6NL08 312 aa26.05■■□□□ 1.76
COL13A1-213ENST00000520267 NBNO60934 754 aa26.05■■□□□ 1.76
COL13A1-213ENST00000520267 GLRBP48167 497 aa26.05■■□□□ 1.76
COL13A1-213ENST00000520267 RENBPP51606 427 aa26.05■■□□□ 1.76
COL13A1-213ENST00000520267 ITKQ08881 620 aa26.05■■□□□ 1.76
COL13A1-213ENST00000520267 SLC12A1Q13621 1099 aa26.05■■□□□ 1.76
COL13A1-213ENST00000520267 ACSBG2Q5FVE4 666 aa26.05■■□□□ 1.76
COL13A1-213ENST00000520267 FBXL22Q6P050 247 aa26.05■■□□□ 1.76
COL13A1-213ENST00000520267 PABPC5Q96DU9 382 aaKnown RBP26.05■■□□□ 1.76
COL13A1-213ENST00000520267 BTN2A3PQ96KV6 586 aa26.05■■□□□ 1.76
COL13A1-213ENST00000520267 CASD1Q96PB1 797 aa26.05■■□□□ 1.76
COL13A1-213ENST00000520267 CDH19Q9H159 772 aa26.05■■□□□ 1.76
COL13A1-213ENST00000520267 MARCH5Q9NX47 278 aa26.05■■□□□ 1.76
COL13A1-213ENST00000520267 CLIC5Q9NZA1 410 aa26.05■■□□□ 1.76
COL13A1-213ENST00000520267 IGLV3-10A0A075B6K4 115 aa26.04■■□□□ 1.76
COL13A1-213ENST00000520267 FAM95CA0A1B0GW59 222 aa26.04■■□□□ 1.76
COL13A1-213ENST00000520267 SIN3BO75182 1162 aa26.04■■□□□ 1.76
COL13A1-213ENST00000520267 CPB1P15086 417 aa26.04■■□□□ 1.76
COL13A1-213ENST00000520267 CCNG1P51959 295 aa26.04■■□□□ 1.76
COL13A1-213ENST00000520267 NOGQ13253 232 aa26.04■■□□□ 1.76
COL13A1-213ENST00000520267 THOC5Q13769 683 aaKnown RBP26.04■■□□□ 1.76
COL13A1-213ENST00000520267 IHHQ14623 411 aa26.04■■□□□ 1.76
COL13A1-213ENST00000520267 GPNMBQ14956 572 aa26.04■■□□□ 1.76
COL13A1-213ENST00000520267 ZYG11AQ6WRX3 759 aa26.04■■□□□ 1.76
COL13A1-213ENST00000520267 CENPLQ8N0S6 344 aaPredicted RBP26.04■■□□□ 1.76
COL13A1-213ENST00000520267 PSMG2Q969U7 264 aa26.04■■□□□ 1.76
COL13A1-213ENST00000520267 DCLRE1BQ9H816 532 aa26.04■■□□□ 1.76
COL13A1-213ENST00000520267 MARCH2Q9P0N8 246 aa26.04■■□□□ 1.76
COL13A1-213ENST00000520267 CDY1Q9Y6F8 540 aa26.04■■□□□ 1.76
COL13A1-213ENST00000520267 MTMR11A4FU01 709 aa26.04■■□□□ 1.76
COL13A1-213ENST00000520267 MAGEC1O60732 1142 aa26.04■■□□□ 1.76
COL13A1-213ENST00000520267 VNN2O95498 520 aa26.04■■□□□ 1.76
COL13A1-213ENST00000520267 APOA4P06727 396 aa26.04■■□□□ 1.76
COL13A1-213ENST00000520267 FGFR3P22607 806 aa26.04■■□□□ 1.76
COL13A1-213ENST00000520267 CD86P42081 329 aa26.04■■□□□ 1.76
COL13A1-213ENST00000520267 MGAT5BQ3V5L5 792 aa26.04■■□□□ 1.76
COL13A1-213ENST00000520267 C10orf120Q5SQS8 335 aa26.04■■□□□ 1.76
COL13A1-213ENST00000520267 MARC1Q5VT66 337 aa26.04■■□□□ 1.76
COL13A1-213ENST00000520267 KIAA0930Q6ICG6 404 aaPredicted RBP26.04■■□□□ 1.76
COL13A1-213ENST00000520267 RNF19BQ6ZMZ0 732 aa26.04■■□□□ 1.76
COL13A1-213ENST00000520267 CIR1Q86X95 450 aaPredicted RBP26.04■■□□□ 1.76
COL13A1-213ENST00000520267 DBF4BQ8NFT6 615 aa26.04■■□□□ 1.76
COL13A1-213ENST00000520267 SREK1Q8WXA9 508 aaKnown RBP26.04■■□□□ 1.76
COL13A1-213ENST00000520267 SCYL1Q96KG9 808 aa26.04■■□□□ 1.76
COL13A1-213ENST00000520267 SEPT5Q99719 369 aaPredicted RBP26.04■■□□□ 1.76
COL13A1-213ENST00000520267 XRN2Q9H0D6 950 aaKnown RBP eCLIP26.04■■□□□ 1.76
COL13A1-213ENST00000520267 COG4Q9H9E3 785 aa26.04■■□□□ 1.76
COL13A1-213ENST00000520267 MID2Q9UJV3 735 aa26.04■■□□□ 1.76
COL13A1-213ENST00000520267 PCDHB7Q9Y5E2 793 aa26.04■■□□□ 1.76
COL13A1-213ENST00000520267 TTC24A2A3L6 582 aaPredicted RBP26.03■■□□□ 1.76
COL13A1-213ENST00000520267 KLHL2O95198 593 aa26.03■■□□□ 1.76
COL13A1-213ENST00000520267 COL6A1P12109 1028 aa26.03■■□□□ 1.76
COL13A1-213ENST00000520267 SELPP16109 830 aa26.03■■□□□ 1.76
COL13A1-213ENST00000520267 PAMP19021 973 aa26.03■■□□□ 1.76
COL13A1-213ENST00000520267 HOXD10P28358 340 aa26.03■■□□□ 1.76
COL13A1-213ENST00000520267 SLC11A1P49279 550 aa26.03■■□□□ 1.76
COL13A1-213ENST00000520267 DSC2Q02487 901 aa26.03■■□□□ 1.76
COL13A1-213ENST00000520267 ZNF470Q6ECI4 717 aa26.03■■□□□ 1.76
COL13A1-213ENST00000520267 ARHGAP24Q8N264 748 aa26.03■■□□□ 1.76
COL13A1-213ENST00000520267 C2CD4AQ8NCU7 369 aaPredicted RBP26.03■■□□□ 1.76
COL13A1-213ENST00000520267 TSNARE1Q96NA8 513 aa26.03■■□□□ 1.76
COL13A1-213ENST00000520267 SP110Q9HB58 689 aa26.03■■□□□ 1.76
COL13A1-213ENST00000520267 ARNT2Q9HBZ2 717 aa26.03■■□□□ 1.76
COL13A1-213ENST00000520267 ATP13A1Q9HD20 1204 aa26.03■■□□□ 1.76
COL13A1-213ENST00000520267 TLR8Q9NR97 1041 aaKnown RBP26.03■■□□□ 1.76
COL13A1-213ENST00000520267 SLC12A8A0AV02 714 aa26.03■■□□□ 1.76
COL13A1-213ENST00000520267 ARVCFO00192 962 aa26.03■■□□□ 1.76
COL13A1-213ENST00000520267 LMNAP02545 664 aaKnown RBP26.03■■□□□ 1.76
COL13A1-213ENST00000520267 MMP2P08253 660 aa26.03■■□□□ 1.76
COL13A1-213ENST00000520267 RAP1GDS1P52306 607 aa26.03■■□□□ 1.76
COL13A1-213ENST00000520267 RAB10P61026 200 aa26.03■■□□□ 1.76
COL13A1-213ENST00000520267 ZNF354CQ86Y25 554 aa26.03■■□□□ 1.76
COL13A1-213ENST00000520267 FSTL5Q8N475 847 aaPredicted RBP26.03■■□□□ 1.76
COL13A1-213ENST00000520267 RDH11Q8TC12 318 aa26.03■■□□□ 1.76
COL13A1-213ENST00000520267 FATE1Q969F0 183 aa26.03■■□□□ 1.76
COL13A1-213ENST00000520267 UBE2OQ9C0C9 1292 aaKnown RBP26.03■■□□□ 1.76
COL13A1-213ENST00000520267 ACOT9Q9Y305 439 aa26.03■■□□□ 1.76
COL13A1-213ENST00000520267 NT5C1B-RDH14C9J2C7 533 aa26.02■■□□□ 1.76
COL13A1-213ENST00000520267 H2AFYO75367 372 aaKnown RBP26.02■■□□□ 1.76
COL13A1-213ENST00000520267 RTN3O95197 1032 aaPredicted RBP26.02■■□□□ 1.76
COL13A1-213ENST00000520267 CHRNGP07510 517 aa26.02■■□□□ 1.76
COL13A1-213ENST00000520267 EPGNQ6UW88 154 aa26.02■■□□□ 1.76
COL13A1-213ENST00000520267 TDRD5Q8NAT2 981 aaKnown RBP26.02■■□□□ 1.76
COL13A1-213ENST00000520267 AGR3Q8TD06 166 aa26.02■■□□□ 1.76
COL13A1-213ENST00000520267 MAPK15Q8TD08 544 aa26.02■■□□□ 1.76
COL13A1-213ENST00000520267 FAM161BQ96MY7 647 aa26.02■■□□□ 1.76
COL13A1-213ENST00000520267 PRKD2Q9BZL6 878 aa26.02■■□□□ 1.76
COL13A1-213ENST00000520267 ELAC1Q9H777 363 aaKnown RBP26.02■■□□□ 1.76
COL13A1-213ENST00000520267 OLA1Q9NTK5 396 aaKnown RBP26.02■■□□□ 1.76
COL13A1-213ENST00000520267 ZNF212Q9UDV6 495 aa26.02■■□□□ 1.76
COL13A1-213ENST00000520267 MEI4A8MW99 385 aa26.02■■□□□ 1.76
COL13A1-213ENST00000520267 AURKAO14965 403 aa26.02■■□□□ 1.76
COL13A1-213ENST00000520267 ALDH2P05091 517 aa26.02■■□□□ 1.76
COL13A1-213ENST00000520267 INHAP05111 366 aa26.02■■□□□ 1.76
COL13A1-213ENST00000520267 DLG1Q12959 904 aa26.02■■□□□ 1.76
COL13A1-213ENST00000520267 LIPMQ5VYY2 423 aa26.02■■□□□ 1.76
COL13A1-213ENST00000520267 SPATA6LQ8N4H0 392 aa26.02■■□□□ 1.76
COL13A1-213ENST00000520267 STYXQ8WUJ0 223 aa26.02■■□□□ 1.76
COL13A1-213ENST00000520267 NXNL1Q96CM4 212 aa26.02■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms