RNA–Protein interactions for RNA: ENST00000519482.1

TRAPPC9-206, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-206ENST00000519482 NRG1Q02297 640 aaPredicted RBP12.71□□□□□ -0.37
TRAPPC9-206ENST00000519482 SMAD1Q15797 465 aaKnown RBP12.71□□□□□ -0.37
TRAPPC9-206ENST00000519482 ASIC2Q16515 512 aa12.71□□□□□ -0.37
TRAPPC9-206ENST00000519482 ARL13BQ3SXY8 428 aa12.71□□□□□ -0.37
TRAPPC9-206ENST00000519482 PIP5KL1Q5T9C9 394 aa12.71□□□□□ -0.37
TRAPPC9-206ENST00000519482 C22orf39Q6P5X5 142 aa12.71□□□□□ -0.37
TRAPPC9-206ENST00000519482 TRIM72Q6ZMU5 477 aa12.71□□□□□ -0.37
TRAPPC9-206ENST00000519482 TFAP2DQ7Z6R9 452 aa12.71□□□□□ -0.37
TRAPPC9-206ENST00000519482 CEP112Q8N8E3 955 aa12.71□□□□□ -0.37
TRAPPC9-206ENST00000519482 ACRBPQ8NEB7 543 aa12.71□□□□□ -0.37
TRAPPC9-206ENST00000519482 MNS1Q8NEH6 495 aa12.71□□□□□ -0.37
TRAPPC9-206ENST00000519482 SLC20A1Q8WUM9 679 aa12.71□□□□□ -0.37
TRAPPC9-206ENST00000519482 PPP1R16AQ96I34 528 aa12.71□□□□□ -0.37
TRAPPC9-206ENST00000519482 WDR24Q96S15 920 aa12.71□□□□□ -0.37
TRAPPC9-206ENST00000519482 NAPGQ99747 312 aaPredicted RBP12.71□□□□□ -0.37
TRAPPC9-206ENST00000519482 CEP44Q9C0F1 390 aa12.71□□□□□ -0.37
TRAPPC9-206ENST00000519482 METTL5Q9NRN9 209 aaKnown RBP12.71□□□□□ -0.37
TRAPPC9-206ENST00000519482 DKK4Q9UBT3 224 aa12.71□□□□□ -0.37
TRAPPC9-206ENST00000519482 CDC23Q9UJX2 597 aa12.71□□□□□ -0.37
TRAPPC9-206ENST00000519482 REXO2Q9Y3B8 237 aaKnown RBP12.71□□□□□ -0.37
TRAPPC9-206ENST00000519482 PCDHGA1Q9Y5H4 931 aa12.71□□□□□ -0.37
TRAPPC9-206ENST00000519482 ZFYVE26Q68DK2 2539 aa12.71□□□□□ -0.37
TRAPPC9-206ENST00000519482 ITPR1Q14643 2758 aa12.71□□□□□ -0.38
TRAPPC9-206ENST00000519482 ACACAQ13085 2346 aa12.71□□□□□ -0.38
TRAPPC9-206ENST00000519482 ADAMTS20P59510 1910 aa12.7□□□□□ -0.38
TRAPPC9-206ENST00000519482 K7ERQ8 282 aa12.7□□□□□ -0.38
TRAPPC9-206ENST00000519482 CBX4O00257 560 aa12.7□□□□□ -0.38
TRAPPC9-206ENST00000519482 ENC1O14682 589 aa12.7□□□□□ -0.38
TRAPPC9-206ENST00000519482 EPHB6O15197 1021 aa12.7□□□□□ -0.38
TRAPPC9-206ENST00000519482 LDOC1O95751 146 aaPredicted RBP12.7□□□□□ -0.38
TRAPPC9-206ENST00000519482 C1SP09871 688 aa12.7□□□□□ -0.38
TRAPPC9-206ENST00000519482 FERP16591 822 aa12.7□□□□□ -0.38
TRAPPC9-206ENST00000519482 CHRNB2P17787 502 aa12.7□□□□□ -0.38
TRAPPC9-206ENST00000519482 SDC4P31431 198 aa12.7□□□□□ -0.38
TRAPPC9-206ENST00000519482 ETFBP38117 255 aa12.7□□□□□ -0.38
TRAPPC9-206ENST00000519482 PRKCIP41743 596 aa12.7□□□□□ -0.38
TRAPPC9-206ENST00000519482 STAT1P42224 750 aa12.7□□□□□ -0.38
TRAPPC9-206ENST00000519482 PTPN9P43378 593 aa12.7□□□□□ -0.38
TRAPPC9-206ENST00000519482 RECQLP46063 649 aaPredicted RBP12.7□□□□□ -0.38
TRAPPC9-206ENST00000519482 GSCP56915 257 aaPredicted RBP12.7□□□□□ -0.38
TRAPPC9-206ENST00000519482 ATP11AP98196 1134 aa12.7□□□□□ -0.38
TRAPPC9-206ENST00000519482 GNA12Q03113 381 aa12.7□□□□□ -0.38
TRAPPC9-206ENST00000519482 POM121L1PQ3SYA9 428 aa12.7□□□□□ -0.38
TRAPPC9-206ENST00000519482 LINGO4Q6UY18 593 aa12.7□□□□□ -0.38
TRAPPC9-206ENST00000519482 STRADAQ7RTN6 431 aa12.7□□□□□ -0.38
TRAPPC9-206ENST00000519482 VPS36Q86VN1 386 aa12.7□□□□□ -0.38
TRAPPC9-206ENST00000519482 SPATS2Q86XZ4 545 aaKnown RBP12.7□□□□□ -0.38
TRAPPC9-206ENST00000519482 PCDH20Q8N6Y1 951 aaKnown RBP12.7□□□□□ -0.38
TRAPPC9-206ENST00000519482 EMC1Q8N766 993 aa12.7□□□□□ -0.38
TRAPPC9-206ENST00000519482 OR7D4Q8NG98 312 aa12.7□□□□□ -0.38
TRAPPC9-206ENST00000519482 UBE2Q2Q8WVN8 375 aa12.7□□□□□ -0.38
TRAPPC9-206ENST00000519482 RXFP2Q8WXD0 754 aa12.7□□□□□ -0.38
TRAPPC9-206ENST00000519482 ARRDC3Q96B67 414 aa12.7□□□□□ -0.38
TRAPPC9-206ENST00000519482 CNDP2Q96KP4 475 aaKnown RBP12.7□□□□□ -0.38
TRAPPC9-206ENST00000519482 SPON2Q9BUD6 331 aa12.7□□□□□ -0.38
TRAPPC9-206ENST00000519482 HDAC8Q9BY41 377 aa12.7□□□□□ -0.38
TRAPPC9-206ENST00000519482 OSBPL2Q9H1P3 480 aa12.7□□□□□ -0.38
TRAPPC9-206ENST00000519482 ATP13A1Q9HD20 1204 aa12.7□□□□□ -0.38
TRAPPC9-206ENST00000519482 NLRC4Q9NPP4 1024 aa12.7□□□□□ -0.38
TRAPPC9-206ENST00000519482 OR12D3Q9UGF7 316 aa12.7□□□□□ -0.38
TRAPPC9-206ENST00000519482 IL36AQ9UHA7 158 aa12.7□□□□□ -0.38
TRAPPC9-206ENST00000519482 MYLKQ15746 1914 aa12.7□□□□□ -0.38
TRAPPC9-206ENST00000519482 TDRD6O60522 2096 aaKnown RBP12.69□□□□□ -0.38
TRAPPC9-206ENST00000519482 LAMA5O15230 3695 aa12.69□□□□□ -0.38
TRAPPC9-206ENST00000519482 FREM2Q5SZK8 3169 aa12.69□□□□□ -0.38
TRAPPC9-206ENST00000519482 KNTC1P50748 2209 aa12.69□□□□□ -0.38
TRAPPC9-206ENST00000519482 FAM170AA1A519 330 aa12.69□□□□□ -0.38
TRAPPC9-206ENST00000519482 C2CD4BA6NLJ0 364 aa12.69□□□□□ -0.38
TRAPPC9-206ENST00000519482 ZNF821O75541 412 aaPredicted RBP12.69□□□□□ -0.38
TRAPPC9-206ENST00000519482 ZMPSTE24O75844 475 aa12.69□□□□□ -0.38
TRAPPC9-206ENST00000519482 TUBBP07437 444 aa12.69□□□□□ -0.38
TRAPPC9-206ENST00000519482 UNGP13051 313 aaPredicted RBP12.69□□□□□ -0.38
TRAPPC9-206ENST00000519482 PRLRP16471 622 aa12.69□□□□□ -0.38
TRAPPC9-206ENST00000519482 GLDCP23378 1020 aa12.69□□□□□ -0.38
TRAPPC9-206ENST00000519482 ADRA1BP35368 520 aa12.69□□□□□ -0.38
TRAPPC9-206ENST00000519482 SERPINH1P50454 418 aaKnown RBP12.69□□□□□ -0.38
TRAPPC9-206ENST00000519482 KLHL30Q0D2K2 578 aa12.69□□□□□ -0.38
TRAPPC9-206ENST00000519482 BNIP3Q12983 259 aa12.69□□□□□ -0.38
TRAPPC9-206ENST00000519482 SLC18A3Q16572 532 aa12.69□□□□□ -0.38
TRAPPC9-206ENST00000519482 CDO1Q16878 200 aa12.69□□□□□ -0.38
TRAPPC9-206ENST00000519482 WHAMMP3Q1A5X7 153 aa12.69□□□□□ -0.38
TRAPPC9-206ENST00000519482 CCDC14Q49A88 953 aa12.69□□□□□ -0.38
TRAPPC9-206ENST00000519482 MANEALQ5VSG8 457 aa12.69□□□□□ -0.38
TRAPPC9-206ENST00000519482 HGSNATQ68CP4 663 aa12.69□□□□□ -0.38
TRAPPC9-206ENST00000519482 DPY19L3Q6ZPD9 716 aa12.69□□□□□ -0.38
TRAPPC9-206ENST00000519482 ERN2Q76MJ5 926 aaKnown RBP12.69□□□□□ -0.38
TRAPPC9-206ENST00000519482 IRF2BP2Q7Z5L9 587 aa12.69□□□□□ -0.38
TRAPPC9-206ENST00000519482 TMPRSS12Q86WS5 348 aa12.69□□□□□ -0.38
TRAPPC9-206ENST00000519482 HORMAD1Q86X24 394 aa12.69□□□□□ -0.38
TRAPPC9-206ENST00000519482 EID2Q8N6I1 236 aa12.69□□□□□ -0.38
TRAPPC9-206ENST00000519482 TMEM145Q8NBT3 493 aa12.69□□□□□ -0.38
TRAPPC9-206ENST00000519482 CHST14Q8NCH0 376 aa12.69□□□□□ -0.38
TRAPPC9-206ENST00000519482 TRIM58Q8NG06 486 aa12.69□□□□□ -0.38
TRAPPC9-206ENST00000519482 FAM174AQ8TBP5 190 aa12.69□□□□□ -0.38
TRAPPC9-206ENST00000519482 ANKRD7Q92527 254 aa12.69□□□□□ -0.38
TRAPPC9-206ENST00000519482 UBXN4Q92575 508 aa12.69□□□□□ -0.38
TRAPPC9-206ENST00000519482 CENPIQ92674 756 aaPredicted RBP12.69□□□□□ -0.38
TRAPPC9-206ENST00000519482 KLHDC7BQ96G42 594 aa12.69□□□□□ -0.38
TRAPPC9-206ENST00000519482 C11orf70Q9BRQ4 267 aa12.69□□□□□ -0.38
TRAPPC9-206ENST00000519482 TNKS2Q9H2K2 1166 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms