RNA–Protein interactions for RNA: ENST00000518040.5

SH2D4A-202, Transcript of SH2 domain containing 4A, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SH2D4A, Length 1,697 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4A-202ENST00000518040 C2orf49Q9BVC5 232 aaPredicted RBP10.04□□□□□ -0.8
SH2D4A-202ENST00000518040 C1QTNF2Q9BXJ5 285 aa10.04□□□□□ -0.8
SH2D4A-202ENST00000518040 BLZF1Q9H2G9 400 aa10.04□□□□□ -0.8
SH2D4A-202ENST00000518040 MMRN2Q9H8L6 949 aa10.04□□□□□ -0.8
SH2D4A-202ENST00000518040 EXOC1Q9NV70 894 aa10.04□□□□□ -0.8
SH2D4A-202ENST00000518040 CUEDC1Q9NWM3 386 aaPredicted RBP10.04□□□□□ -0.8
SH2D4A-202ENST00000518040 FOXJ2Q9P0K8 574 aa10.04□□□□□ -0.8
SH2D4A-202ENST00000518040 SRPK3Q9UPE1 567 aa10.04□□□□□ -0.8
SH2D4A-202ENST00000518040 NAALADL1Q9UQQ1 740 aa10.04□□□□□ -0.8
SH2D4A-202ENST00000518040 RAD51BO15315 384 aa10.03□□□□□ -0.8
SH2D4A-202ENST00000518040 VPS4BO75351 444 aa10.03□□□□□ -0.8
SH2D4A-202ENST00000518040 ADRB3P13945 408 aa10.03□□□□□ -0.8
SH2D4A-202ENST00000518040 ITGB7P26010 798 aa10.03□□□□□ -0.8
SH2D4A-202ENST00000518040 PSMC2P35998 433 aaKnown RBP10.03□□□□□ -0.8
SH2D4A-202ENST00000518040 NASPP49321 788 aaPredicted RBP10.03□□□□□ -0.8
SH2D4A-202ENST00000518040 MXI1P50539 228 aa10.03□□□□□ -0.8
SH2D4A-202ENST00000518040 PPARDQ03181 441 aa10.03□□□□□ -0.8
SH2D4A-202ENST00000518040 STK4Q13043 487 aa10.03□□□□□ -0.8
SH2D4A-202ENST00000518040 SEPT6Q14141 434 aa10.03□□□□□ -0.8
SH2D4A-202ENST00000518040 LACTB2Q53H82 288 aaPredicted RBP10.03□□□□□ -0.8
SH2D4A-202ENST00000518040 HIST2H2BCQ6DN03 193 aa10.03□□□□□ -0.8
SH2D4A-202ENST00000518040 PMF1Q6P1K2 205 aa10.03□□□□□ -0.8
SH2D4A-202ENST00000518040 MACC1Q6ZN28 852 aa10.03□□□□□ -0.8
SH2D4A-202ENST00000518040 GKN2Q86XP6 184 aa10.03□□□□□ -0.8
SH2D4A-202ENST00000518040 CCNJLQ8IV13 435 aa10.03□□□□□ -0.8
SH2D4A-202ENST00000518040 FAM186BQ8IYM0 893 aa10.03□□□□□ -0.8
SH2D4A-202ENST00000518040 NKD1Q969G9 470 aa10.03□□□□□ -0.8
SH2D4A-202ENST00000518040 RAB7BQ96AH8 199 aa10.03□□□□□ -0.8
SH2D4A-202ENST00000518040 USP28Q96RU2 1077 aa10.03□□□□□ -0.8
SH2D4A-202ENST00000518040 ZNF71Q9NQZ8 489 aaPredicted RBP10.03□□□□□ -0.8
SH2D4A-202ENST00000518040 XPO7Q9UIA9 1087 aaKnown RBP10.03□□□□□ -0.8
SH2D4A-202ENST00000518040 APPL1Q9UKG1 709 aa10.03□□□□□ -0.8
SH2D4A-202ENST00000518040 VPS4AQ9UN37 437 aa10.03□□□□□ -0.8
SH2D4A-202ENST00000518040 FADS3Q9Y5Q0 445 aa10.03□□□□□ -0.8
SH2D4A-202ENST00000518040 UTP20O75691 2785 aaKnown RBP10.03□□□□□ -0.8
SH2D4A-202ENST00000518040 CASC3O15234 703 aaKnown RBP10.02□□□□□ -0.8
SH2D4A-202ENST00000518040 CLDN11O75508 207 aa10.02□□□□□ -0.8
SH2D4A-202ENST00000518040 FYNP06241 537 aa10.02□□□□□ -0.8
SH2D4A-202ENST00000518040 PAEPP09466 180 aa10.02□□□□□ -0.8
SH2D4A-202ENST00000518040 CTSEP14091 401 aa10.02□□□□□ -0.8
SH2D4A-202ENST00000518040 NR2F2P24468 414 aa10.02□□□□□ -0.8
SH2D4A-202ENST00000518040 L1CAMP32004 1257 aa10.02□□□□□ -0.8
SH2D4A-202ENST00000518040 RGS7P49802 495 aa10.02□□□□□ -0.8
SH2D4A-202ENST00000518040 MCCD1P59942 119 aaPredicted RBP10.02□□□□□ -0.8
SH2D4A-202ENST00000518040 CENPCQ03188 943 aa10.02□□□□□ -0.8
SH2D4A-202ENST00000518040 CUL4BQ13620 913 aa10.02□□□□□ -0.8
SH2D4A-202ENST00000518040 ZC3H12AQ5D1E8 599 aaKnown RBP10.02□□□□□ -0.8
SH2D4A-202ENST00000518040 TAC4Q86UU9 113 aa10.02□□□□□ -0.8
SH2D4A-202ENST00000518040 PACS2Q86VP3 889 aa10.02□□□□□ -0.8
SH2D4A-202ENST00000518040 KYQ8NBH2 561 aa10.02□□□□□ -0.8
SH2D4A-202ENST00000518040 KIAA0895Q8NCT3 520 aa10.02□□□□□ -0.8
SH2D4A-202ENST00000518040 FAM149B1Q96BN6 582 aa10.02□□□□□ -0.8
SH2D4A-202ENST00000518040 ARHGEF26Q96DR7 871 aa10.02□□□□□ -0.8
SH2D4A-202ENST00000518040 RPRD1AQ96P16 312 aaPredicted RBP10.02□□□□□ -0.8
SH2D4A-202ENST00000518040 PRMT1Q99873 361 aaKnown RBP10.02□□□□□ -0.8
SH2D4A-202ENST00000518040 EFHD1Q9BUP0 239 aa10.02□□□□□ -0.8
SH2D4A-202ENST00000518040 C1QTNF7Q9BXJ2 289 aa10.02□□□□□ -0.8
SH2D4A-202ENST00000518040 CLPBQ9H078 707 aa10.02□□□□□ -0.8
SH2D4A-202ENST00000518040 MUC3BQ9H195 1237 aa10.02□□□□□ -0.8
SH2D4A-202ENST00000518040 ZSCAN16Q9H4T2 348 aaPredicted RBP10.02□□□□□ -0.8
SH2D4A-202ENST00000518040 TBC1D30Q9Y2I9 924 aa10.02□□□□□ -0.8
SH2D4A-202ENST00000518040 PCDHGA3Q9Y5H0 932 aa10.02□□□□□ -0.8
SH2D4A-202ENST00000518040 OR51B4Q9Y5P0 310 aa10.02□□□□□ -0.8
SH2D4A-202ENST00000518040 ZFC3H1O60293 1989 aaKnown RBP10.02□□□□□ -0.8
SH2D4A-202ENST00000518040 TMEM110-MUSTN1A8MSY1 372 aa10.02□□□□□ -0.81
SH2D4A-202ENST00000518040 HGSO14964 777 aaPredicted RBP10.02□□□□□ -0.81
SH2D4A-202ENST00000518040 POLR2DO15514 142 aaKnown RBP10.02□□□□□ -0.81
SH2D4A-202ENST00000518040 ZW10O43264 779 aa10.02□□□□□ -0.81
SH2D4A-202ENST00000518040 CUTAO60888 179 aa10.02□□□□□ -0.81
SH2D4A-202ENST00000518040 LEFTY1O75610 366 aa10.02□□□□□ -0.81
SH2D4A-202ENST00000518040 KRT38O76015 456 aa10.02□□□□□ -0.81
SH2D4A-202ENST00000518040 GLB1P16278 677 aa10.02□□□□□ -0.81
SH2D4A-202ENST00000518040 TBXAS1P24557 533 aaPredicted RBP10.02□□□□□ -0.81
SH2D4A-202ENST00000518040 ELAVL4P26378 380 aaKnown RBP10.02□□□□□ -0.81
SH2D4A-202ENST00000518040 ETV5P41161 510 aa10.02□□□□□ -0.81
SH2D4A-202ENST00000518040 NUMBP49757 651 aa10.02□□□□□ -0.81
SH2D4A-202ENST00000518040 CUL2Q13617 745 aa10.02□□□□□ -0.81
SH2D4A-202ENST00000518040 CNGA2Q16280 664 aa10.02□□□□□ -0.81
SH2D4A-202ENST00000518040 CLPPQ16740 277 aaPredicted RBP10.02□□□□□ -0.81
SH2D4A-202ENST00000518040 TPRG1LQ5T0D9 272 aa10.02□□□□□ -0.81
SH2D4A-202ENST00000518040 FAM173BQ6P4H8 233 aa10.02□□□□□ -0.81
SH2D4A-202ENST00000518040 LINC00301Q8NCQ3 95 aa10.02□□□□□ -0.81
SH2D4A-202ENST00000518040 CCDC112Q8NEF3 446 aa10.02□□□□□ -0.81
SH2D4A-202ENST00000518040 PCDH19Q8TAB3 1148 aa10.02□□□□□ -0.81
SH2D4A-202ENST00000518040 CLEC4CQ8WTT0 213 aa10.02□□□□□ -0.81
SH2D4A-202ENST00000518040 APOBEC4Q8WW27 367 aaKnown RBP10.02□□□□□ -0.81
SH2D4A-202ENST00000518040 SEMA4DQ92854 862 aa10.02□□□□□ -0.81
SH2D4A-202ENST00000518040 EEF2KMTQ96G04 330 aa10.02□□□□□ -0.81
SH2D4A-202ENST00000518040 TAAR9Q96RI9 348 aa10.02□□□□□ -0.81
SH2D4A-202ENST00000518040 MIS12Q9H081 205 aa10.02□□□□□ -0.81
SH2D4A-202ENST00000518040 TCEAL2Q9H3H9 227 aaPredicted RBP10.02□□□□□ -0.81
SH2D4A-202ENST00000518040 SIRPGQ9P1W8 387 aa10.02□□□□□ -0.81
SH2D4A-202ENST00000518040 GPR34Q9UPC5 381 aa10.02□□□□□ -0.81
SH2D4A-202ENST00000518040 IGLON5A6NGN9 336 aa10.01□□□□□ -0.81
SH2D4A-202ENST00000518040 M0QYV0 167 aa10.01□□□□□ -0.81
SH2D4A-202ENST00000518040 NEMP1O14524 444 aa10.01□□□□□ -0.81
SH2D4A-202ENST00000518040 MTSS1O43312 755 aa10.01□□□□□ -0.81
SH2D4A-202ENST00000518040 CNTN5O94779 1100 aa10.01□□□□□ -0.81
SH2D4A-202ENST00000518040 DDAH2O95865 285 aa10.01□□□□□ -0.81
SH2D4A-202ENST00000518040 TRUB2O95900 331 aaKnown RBP10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms