RNA–Protein interactions for RNA: ENST00000517691.1

SKP1-204, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 2,033 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-204ENST00000517691 CCL16O15467 120 aa2.87□□□□□ -1.95
SKP1-204ENST00000517691 IRAK2O43187 625 aa2.87□□□□□ -1.95
SKP1-204ENST00000517691 HCRTO43612 131 aa2.87□□□□□ -1.95
SKP1-204ENST00000517691 AKR1B10O60218 316 aa2.87□□□□□ -1.95
SKP1-204ENST00000517691 TBC1D4O60343 1298 aa2.87□□□□□ -1.95
SKP1-204ENST00000517691 N4BP1O75113 896 aaKnown RBP2.87□□□□□ -1.95
SKP1-204ENST00000517691 ATP2C2O75185 946 aa2.87□□□□□ -1.95
SKP1-204ENST00000517691 NDUFS2O75306 463 aa2.87□□□□□ -1.95
SKP1-204ENST00000517691 TBX10O75333 385 aa2.87□□□□□ -1.95
SKP1-204ENST00000517691 SKAP2O75563 359 aaPredicted RBP2.87□□□□□ -1.95
SKP1-204ENST00000517691 RFPL2O75678 378 aa2.87□□□□□ -1.95
SKP1-204ENST00000517691 SOAT2O75908 522 aa2.87□□□□□ -1.95
SKP1-204ENST00000517691 ZNF205O95201 554 aa2.87□□□□□ -1.95
SKP1-204ENST00000517691 GOSR1O95249 250 aa2.87□□□□□ -1.95
SKP1-204ENST00000517691 SEC24AO95486 1093 aa2.87□□□□□ -1.95
SKP1-204ENST00000517691 GLP2RO95838 553 aa2.87□□□□□ -1.95
SKP1-204ENST00000517691 LRG1P02750 347 aa2.87□□□□□ -1.95
SKP1-204ENST00000517691 KRT10P13645 584 aa2.87□□□□□ -1.95
SKP1-204ENST00000517691 ATF2P15336 505 aa2.87□□□□□ -1.95
SKP1-204ENST00000517691 HOXB8P17481 243 aaPredicted RBP2.87□□□□□ -1.95
SKP1-204ENST00000517691 DESP17661 470 aa2.87□□□□□ -1.95
SKP1-204ENST00000517691 PTPN1P18031 435 aaKnown RBP2.87□□□□□ -1.95
SKP1-204ENST00000517691 TRIM21P19474 475 aaKnown RBP2.87□□□□□ -1.95
SKP1-204ENST00000517691 AGXTP21549 392 aa2.87□□□□□ -1.95
SKP1-204ENST00000517691 WARSP23381 471 aaKnown RBP2.87□□□□□ -1.95
SKP1-204ENST00000517691 SP100P23497 879 aaPredicted RBP2.87□□□□□ -1.95
SKP1-204ENST00000517691 IL4RP24394 825 aa2.87□□□□□ -1.95
SKP1-204ENST00000517691 PCSK1P29120 753 aa2.87□□□□□ -1.95
SKP1-204ENST00000517691 POLD2P49005 469 aa2.87□□□□□ -1.95
SKP1-204ENST00000517691 KCNQ1P51787 676 aa2.87□□□□□ -1.95
SKP1-204ENST00000517691 EPHB3P54753 998 aa2.87□□□□□ -1.95
SKP1-204ENST00000517691 NAP1L1P55209 391 aaKnown RBP2.87□□□□□ -1.95
SKP1-204ENST00000517691 CASP6P55212 293 aa2.87□□□□□ -1.95
SKP1-204ENST00000517691 TPM4P67936 248 aa2.87□□□□□ -1.95
SKP1-204ENST00000517691 NOP14P78316 857 aaKnown RBP2.87□□□□□ -1.95
SKP1-204ENST00000517691 OCRLQ01968 901 aa2.87□□□□□ -1.95
SKP1-204ENST00000517691 MYL5Q02045 173 aa2.87□□□□□ -1.95
SKP1-204ENST00000517691 ITIH3Q06033 890 aa2.87□□□□□ -1.95
SKP1-204ENST00000517691 ENPEPQ07075 957 aa2.87□□□□□ -1.95
SKP1-204ENST00000517691 TWF1Q12792 350 aa2.87□□□□□ -1.95
SKP1-204ENST00000517691 ERV3-1Q14264 604 aa2.87□□□□□ -1.95
SKP1-204ENST00000517691 ZSCAN23Q3MJ62 389 aa2.87□□□□□ -1.95
SKP1-204ENST00000517691 MGAT5BQ3V5L5 792 aa2.87□□□□□ -1.95
SKP1-204ENST00000517691 LEXMQ3ZCV2 418 aa2.87□□□□□ -1.95
SKP1-204ENST00000517691 TCP11X2Q5H9J9 407 aa2.87□□□□□ -1.95
SKP1-204ENST00000517691 MDH1BQ5I0G3 518 aa2.87□□□□□ -1.95
SKP1-204ENST00000517691 TPGS2Q68CL5 300 aa2.87□□□□□ -1.95
SKP1-204ENST00000517691 CWF19L1Q69YN2 538 aaKnown RBP2.87□□□□□ -1.95
SKP1-204ENST00000517691 SLC8B1Q6J4K2 584 aa2.87□□□□□ -1.95
SKP1-204ENST00000517691 SYCE2Q6PIF2 218 aa2.87□□□□□ -1.95
SKP1-204ENST00000517691 FOXR2Q6PJQ5 311 aa2.87□□□□□ -1.95
SKP1-204ENST00000517691 GBP6Q6ZN66 633 aa2.87□□□□□ -1.95
SKP1-204ENST00000517691 C15orf39Q6ZRI6 1047 aa2.87□□□□□ -1.95
SKP1-204ENST00000517691 RBM43Q6ZSC3 357 aaKnown RBP2.87□□□□□ -1.95
SKP1-204ENST00000517691 RRAGAQ7L523 313 aa2.87□□□□□ -1.95
SKP1-204ENST00000517691 ZAR1Q86SH2 424 aa2.87□□□□□ -1.95
SKP1-204ENST00000517691 C1QL4Q86Z23 238 aa2.87□□□□□ -1.95
SKP1-204ENST00000517691 CREG2Q8IUH2 290 aa2.87□□□□□ -1.95
SKP1-204ENST00000517691 SPATA2LQ8IUW3 424 aaPredicted RBP2.87□□□□□ -1.95
SKP1-204ENST00000517691 SCN4BQ8IWT1 228 aa2.87□□□□□ -1.95
SKP1-204ENST00000517691 ZC3H3Q8IXZ2 948 aaKnown RBP2.87□□□□□ -1.95
SKP1-204ENST00000517691 GPR65Q8IYL9 337 aa2.87□□□□□ -1.95
SKP1-204ENST00000517691 ELMOD1Q8N336 334 aa2.87□□□□□ -1.95
SKP1-204ENST00000517691 GALNT15Q8N3T1 639 aa2.87□□□□□ -1.95
SKP1-204ENST00000517691 AOPEPQ8N6M6 819 aa2.87□□□□□ -1.95
SKP1-204ENST00000517691 ATAD1Q8NBU5 361 aa2.87□□□□□ -1.95
SKP1-204ENST00000517691 OR10H5Q8NGA6 315 aa2.87□□□□□ -1.95
SKP1-204ENST00000517691 OR10T2Q8NGX3 314 aa2.87□□□□□ -1.95
SKP1-204ENST00000517691 GADD45GIP1Q8TAE8 222 aaPredicted RBP2.87□□□□□ -1.95
SKP1-204ENST00000517691 PUM2Q8TB72 1066 aaKnown RBP eCLIP2.87□□□□□ -1.955e-46■■□□□ 14
SKP1-204ENST00000517691 HDAC7Q8WUI4 952 aa2.87□□□□□ -1.95
SKP1-204ENST00000517691 SMG7Q92540 1137 aaKnown RBP2.87□□□□□ -1.95
SKP1-204ENST00000517691 SEMA4DQ92854 862 aa2.87□□□□□ -1.95
SKP1-204ENST00000517691 ZUFSPQ96AP4 578 aa2.87□□□□□ -1.95
SKP1-204ENST00000517691 RPGRIP1Q96KN7 1286 aa2.87□□□□□ -1.95
SKP1-204ENST00000517691 ZNF512Q96ME7 567 aaPredicted RBP2.87□□□□□ -1.95
SKP1-204ENST00000517691 MED15Q96RN5 788 aa2.87□□□□□ -1.95
SKP1-204ENST00000517691 ACBD6Q9BR61 282 aa2.87□□□□□ -1.95
SKP1-204ENST00000517691 MRPL45Q9BRJ2 306 aaKnown RBP2.87□□□□□ -1.95
SKP1-204ENST00000517691 TUBGCP2Q9BSJ2 902 aa2.87□□□□□ -1.95
SKP1-204ENST00000517691 CRACR2AQ9BSW2 395 aa2.87□□□□□ -1.95
SKP1-204ENST00000517691 MED10Q9BTT4 135 aa2.87□□□□□ -1.95
SKP1-204ENST00000517691 DNAI2Q9GZS0 605 aa2.87□□□□□ -1.95
SKP1-204ENST00000517691 INTS2Q9H0H0 1204 aaKnown RBP2.87□□□□□ -1.95
SKP1-204ENST00000517691 ZCWPW1Q9H0M4 648 aa2.87□□□□□ -1.95
SKP1-204ENST00000517691 XYLT2Q9H1B5 865 aa2.87□□□□□ -1.95
SKP1-204ENST00000517691 VPS16Q9H269 839 aa2.87□□□□□ -1.95
SKP1-204ENST00000517691 ADAM7Q9H2U9 754 aa2.87□□□□□ -1.95
SKP1-204ENST00000517691 ZWILCHQ9H900 591 aa2.87□□□□□ -1.95
SKP1-204ENST00000517691 SFXN1Q9H9B4 322 aa2.87□□□□□ -1.95
SKP1-204ENST00000517691 AFF4Q9UHB7 1163 aaKnown RBP2.87□□□□□ -1.95
SKP1-204ENST00000517691 SLC13A4Q9UKG4 626 aa2.87□□□□□ -1.95
SKP1-204ENST00000517691 CDH9Q9ULB4 789 aa2.87□□□□□ -1.95
SKP1-204ENST00000517691 ZNF711Q9Y462 761 aa2.87□□□□□ -1.95
SKP1-204ENST00000517691 USP15Q9Y4E8 981 aaPredicted RBP2.87□□□□□ -1.95
SKP1-204ENST00000517691 LOXHD1Q8IVV2 1947 aa2.87□□□□□ -1.95
SKP1-204ENST00000517691 SPTBN5Q9NRC6 3674 aaKnown RBP2.87□□□□□ -1.95
SKP1-204ENST00000517691 MYBPHLA2RUH7 354 aa2.86□□□□□ -1.95
SKP1-204ENST00000517691 MTMR11A4FU01 709 aa2.86□□□□□ -1.95
SKP1-204ENST00000517691 AQP12BA6NM10 295 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms