RNA–Protein interactions for RNA: ENST00000517625.5

SKP1-203, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 3 BASIC

Gene SKP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-203ENST00000517625 FAM83HQ6ZRV2 1179 aaPredicted RBP3.23□□□□□ -1.89
SKP1-203ENST00000517625 FAM160B2Q86V87 743 aa3.23□□□□□ -1.89
SKP1-203ENST00000517625 FAM217AQ8IXS0 508 aa3.23□□□□□ -1.89
SKP1-203ENST00000517625 LRRC57Q8N9N7 239 aa3.23□□□□□ -1.89
SKP1-203ENST00000517625 MCPH1Q8NEM0 835 aa3.23□□□□□ -1.89
SKP1-203ENST00000517625 CMASQ8NFW8 434 aaPredicted RBP3.23□□□□□ -1.89
SKP1-203ENST00000517625 TMEM174Q8WUU8 243 aa3.23□□□□□ -1.89
SKP1-203ENST00000517625 SKA1Q96BD8 255 aa3.23□□□□□ -1.89
SKP1-203ENST00000517625 KLHL29Q96CT2 875 aa3.23□□□□□ -1.89
SKP1-203ENST00000517625 RNF183Q96D59 192 aa3.23□□□□□ -1.89
SKP1-203ENST00000517625 HMCESQ96FZ2 354 aa3.23□□□□□ -1.89
SKP1-203ENST00000517625 NLRP4Q96MN2 994 aa3.23□□□□□ -1.89
SKP1-203ENST00000517625 NR1H4Q96RI1 486 aaPredicted RBP3.23□□□□□ -1.89
SKP1-203ENST00000517625 CXorf56Q9H5V9 222 aa3.23□□□□□ -1.89
SKP1-203ENST00000517625 MAP6D1Q9H9H5 199 aa3.23□□□□□ -1.89
SKP1-203ENST00000517625 POT1Q9NUX5 634 aa3.23□□□□□ -1.89
SKP1-203ENST00000517625 IRAK4Q9NWZ3 460 aa3.23□□□□□ -1.89
SKP1-203ENST00000517625 NLKQ9UBE8 527 aa3.23□□□□□ -1.89
SKP1-203ENST00000517625 PEMTQ9UBM1 199 aa3.23□□□□□ -1.89
SKP1-203ENST00000517625 CDH22Q9UJ99 828 aa3.23□□□□□ -1.89
SKP1-203ENST00000517625 CARD8Q9Y2G2 431 aa3.23□□□□□ -1.89
SKP1-203ENST00000517625 PCDHGB5Q9Y5G0 923 aa3.23□□□□□ -1.89
SKP1-203ENST00000517625 A0A0A0MQY5 61 aa3.22□□□□□ -1.89
SKP1-203ENST00000517625 TEX13CA0A0J9YWL9 993 aa3.22□□□□□ -1.89
SKP1-203ENST00000517625 A0A1W2PPH5 198 aa3.22□□□□□ -1.89
SKP1-203ENST00000517625 A0A1W2PQM1 296 aa3.22□□□□□ -1.89
SKP1-203ENST00000517625 TARSL2A2RTX5 802 aaKnown RBP3.22□□□□□ -1.89
SKP1-203ENST00000517625 WDR91A4D1P6 747 aa3.22□□□□□ -1.89
SKP1-203ENST00000517625 PABPN1LA6NDY0 278 aaKnown RBP3.22□□□□□ -1.89
SKP1-203ENST00000517625 A6NNC1 897 aa3.22□□□□□ -1.89
SKP1-203ENST00000517625 HMGB1P1B2RPK0 211 aaPredicted RBP3.22□□□□□ -1.89
SKP1-203ENST00000517625 HSPB6O14558 160 aa3.22□□□□□ -1.89
SKP1-203ENST00000517625 SEC14L2O76054 403 aa3.22□□□□□ -1.89
SKP1-203ENST00000517625 NDUFB8O95169 186 aa3.22□□□□□ -1.89
SKP1-203ENST00000517625 RTN3O95197 1032 aaPredicted RBP3.22□□□□□ -1.89
SKP1-203ENST00000517625 CCNDBP1O95273 360 aa3.22□□□□□ -1.89
SKP1-203ENST00000517625 DDX58O95786 925 aaKnown RBP3.22□□□□□ -1.89
SKP1-203ENST00000517625 SYF2O95926 243 aaKnown RBP3.22□□□□□ -1.89
SKP1-203ENST00000517625 SCGB1D1O95968 90 aa3.22□□□□□ -1.89
SKP1-203ENST00000517625 HEXAP06865 529 aa3.22□□□□□ -1.89
SKP1-203ENST00000517625 HSPA1AP0DMV8 641 aaKnown RBP3.22□□□□□ -1.89
SKP1-203ENST00000517625 HSPA1BP0DMV9 641 aaKnown RBP3.22□□□□□ -1.89
SKP1-203ENST00000517625 MYF6P23409 242 aa3.22□□□□□ -1.89
SKP1-203ENST00000517625 FMO4P31512 558 aa3.22□□□□□ -1.89
SKP1-203ENST00000517625 MAN1A1P33908 653 aa3.22□□□□□ -1.89
SKP1-203ENST00000517625 RFC1P35251 1148 aaPredicted RBP3.22□□□□□ -1.89
SKP1-203ENST00000517625 BSGP35613 385 aa3.22□□□□□ -1.89
SKP1-203ENST00000517625 GGT5P36269 586 aa3.22□□□□□ -1.89
SKP1-203ENST00000517625 AVPR1AP37288 418 aa3.22□□□□□ -1.89
SKP1-203ENST00000517625 CCR9P51686 369 aa3.22□□□□□ -1.89
SKP1-203ENST00000517625 ZP1P60852 638 aa3.22□□□□□ -1.89
SKP1-203ENST00000517625 RPL7AP62424 266 aaKnown RBP3.22□□□□□ -1.89
SKP1-203ENST00000517625 FAM27E3Q08E93 113 aa3.22□□□□□ -1.89
SKP1-203ENST00000517625 ST3GAL1Q11201 340 aa3.22□□□□□ -1.89
SKP1-203ENST00000517625 RALBP1Q15311 655 aa3.22□□□□□ -1.89
SKP1-203ENST00000517625 TAF11Q15544 211 aa3.22□□□□□ -1.89
SKP1-203ENST00000517625 HIST2H2ACQ16777 129 aaPredicted RBP3.22□□□□□ -1.89
SKP1-203ENST00000517625 DUSP6Q16828 381 aa3.22□□□□□ -1.89
SKP1-203ENST00000517625 SLC4A8Q2Y0W8 1093 aa3.22□□□□□ -1.89
SKP1-203ENST00000517625 PLEKHO1Q53GL0 409 aaPredicted RBP3.22□□□□□ -1.89
SKP1-203ENST00000517625 ZNF667Q5HYK9 610 aa3.22□□□□□ -1.89
SKP1-203ENST00000517625 FAM69AQ5T7M9 428 aa3.22□□□□□ -1.89
SKP1-203ENST00000517625 H1FNTQ75WM6 255 aaPredicted RBP3.22□□□□□ -1.89
SKP1-203ENST00000517625 B4GALNT4Q76KP1 1039 aa3.22□□□□□ -1.89
SKP1-203ENST00000517625 MAATS1Q7Z4T9 603 aa3.22□□□□□ -1.89
SKP1-203ENST00000517625 TRIM74Q86UV6 250 aa3.22□□□□□ -1.89
SKP1-203ENST00000517625 TRIM73Q86UV7 250 aa3.22□□□□□ -1.89
SKP1-203ENST00000517625 PIM3Q86V86 326 aa3.22□□□□□ -1.89
SKP1-203ENST00000517625 CHD1LQ86WJ1 897 aa3.22□□□□□ -1.89
SKP1-203ENST00000517625 DENND6AQ8IWF6 608 aa3.22□□□□□ -1.89
SKP1-203ENST00000517625 CCDC105Q8IYK2 499 aa3.22□□□□□ -1.89
SKP1-203ENST00000517625 RBFAQ8N0V3 343 aa3.22□□□□□ -1.89
SKP1-203ENST00000517625 TEX45Q8NA69 505 aa3.22□□□□□ -1.89
SKP1-203ENST00000517625 GABPB2Q8TAK5 448 aaPredicted RBP3.22□□□□□ -1.89
SKP1-203ENST00000517625 GDPD5Q8WTR4 605 aa3.22□□□□□ -1.89
SKP1-203ENST00000517625 SLC35F5Q8WV83 523 aa3.22□□□□□ -1.89
SKP1-203ENST00000517625 SMG7Q92540 1137 aaKnown RBP3.22□□□□□ -1.89
SKP1-203ENST00000517625 KIF1BPQ96EK5 621 aa3.22□□□□□ -1.89
SKP1-203ENST00000517625 H2AFJQ9BTM1 129 aa3.22□□□□□ -1.89
SKP1-203ENST00000517625 RANBP17Q9H2T7 1088 aaKnown RBP3.22□□□□□ -1.89
SKP1-203ENST00000517625 CATSPERBQ9H7T0 1116 aa3.22□□□□□ -1.89
SKP1-203ENST00000517625 KRCC1Q9NPI7 259 aaPredicted RBP3.22□□□□□ -1.89
SKP1-203ENST00000517625 BABAM1Q9NWV8 329 aa3.22□□□□□ -1.89
SKP1-203ENST00000517625 ANKRD10Q9NXR5 420 aa3.22□□□□□ -1.89
SKP1-203ENST00000517625 NCKIPSDQ9NZQ3 722 aa3.22□□□□□ -1.89
SKP1-203ENST00000517625 SRPRBQ9Y5M8 271 aaKnown RBP3.22□□□□□ -1.89
SKP1-203ENST00000517625 ARHGEF17Q96PE2 2063 aaPredicted RBP3.21□□□□□ -1.89
SKP1-203ENST00000517625 TBX18O95935 607 aa3.21□□□□□ -1.9
SKP1-203ENST00000517625 CD4P01730 458 aa3.21□□□□□ -1.9
SKP1-203ENST00000517625 CLEC3BP05452 202 aa3.21□□□□□ -1.9
SKP1-203ENST00000517625 GALTP07902 379 aa3.21□□□□□ -1.9
SKP1-203ENST00000517625 CHRNB1P11230 501 aa3.21□□□□□ -1.9
SKP1-203ENST00000517625 CYP19A1P11511 503 aaPredicted RBP3.21□□□□□ -1.9
SKP1-203ENST00000517625 ATP1A3P13637 1013 aa3.21□□□□□ -1.9
SKP1-203ENST00000517625 SLC2A4P14672 509 aa3.21□□□□□ -1.9
SKP1-203ENST00000517625 CHRNB2P17787 502 aa3.21□□□□□ -1.9
SKP1-203ENST00000517625 CHATP28329 748 aa3.21□□□□□ -1.9
SKP1-203ENST00000517625 DCTDP32321 178 aa3.21□□□□□ -1.9
SKP1-203ENST00000517625 TTKP33981 857 aa3.21□□□□□ -1.9
SKP1-203ENST00000517625 RYKP34925 604 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms