RNA–Protein interactions for RNA: ENST00000517434.2

PCDHGA6-201, Transcript of protocadherin gamma subfamily A, 6, humanhuman

TSL 1 (best) BASIC

Gene PCDHGA6, Length 4,775 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6-201ENST00000517434 SULT2A1Q06520 285 aa12.39□□□□□ -0.43
PCDHGA6-201ENST00000517434 COL9A3Q14050 684 aaPredicted RBP12.39□□□□□ -0.43
PCDHGA6-201ENST00000517434 DGKKQ5KSL6 1271 aa12.39□□□□□ -0.43
PCDHGA6-201ENST00000517434 GJB7Q6PEY0 223 aa12.39□□□□□ -0.43
PCDHGA6-201ENST00000517434 PACS1Q6VY07 963 aa12.39□□□□□ -0.43
PCDHGA6-201ENST00000517434 GRPEL2Q8TAA5 225 aa12.39□□□□□ -0.43
PCDHGA6-201ENST00000517434 SLC25A23Q9BV35 468 aa12.39□□□□□ -0.43
PCDHGA6-201ENST00000517434 OSBPL6Q9BZF3 934 aa12.39□□□□□ -0.43
PCDHGA6-201ENST00000517434 SEMA6AQ9H2E6 1030 aa12.39□□□□□ -0.43
PCDHGA6-201ENST00000517434 OSGEPL1Q9H4B0 414 aa12.39□□□□□ -0.43
PCDHGA6-201ENST00000517434 AVENQ9NQS1 362 aaPredicted RBP12.39□□□□□ -0.43
PCDHGA6-201ENST00000517434 SRRDQ9UH36 339 aa12.39□□□□□ -0.43
PCDHGA6-201ENST00000517434 A0A088AWK7 358 aa12.39□□□□□ -0.43
PCDHGA6-201ENST00000517434 H3BMM5 538 aa12.39□□□□□ -0.43
PCDHGA6-201ENST00000517434 GPR25O00155 361 aa12.39□□□□□ -0.43
PCDHGA6-201ENST00000517434 DARSP14868 501 aaKnown RBP12.39□□□□□ -0.43
PCDHGA6-201ENST00000517434 ZNF10P21506 573 aaPredicted RBP12.39□□□□□ -0.43
PCDHGA6-201ENST00000517434 PSMA3P25788 255 aa12.39□□□□□ -0.43
PCDHGA6-201ENST00000517434 HK2P52789 917 aa12.39□□□□□ -0.43
PCDHGA6-201ENST00000517434 KCNA10Q16322 511 aa12.39□□□□□ -0.43
PCDHGA6-201ENST00000517434 PDCD4Q53EL6 469 aaKnown RBP12.39□□□□□ -0.43
PCDHGA6-201ENST00000517434 ARMC12Q5T9G4 340 aa12.39□□□□□ -0.43
PCDHGA6-201ENST00000517434 C1orf186Q6ZWK4 172 aa12.39□□□□□ -0.43
PCDHGA6-201ENST00000517434 CEP68Q76N32 757 aa12.39□□□□□ -0.43
PCDHGA6-201ENST00000517434 CPA6Q8N4T0 437 aa12.39□□□□□ -0.43
PCDHGA6-201ENST00000517434 ZSCAN18Q8TBC5 510 aaPredicted RBP12.39□□□□□ -0.43
PCDHGA6-201ENST00000517434 AHCYL2Q96HN2 611 aaKnown RBP12.39□□□□□ -0.43
PCDHGA6-201ENST00000517434 MTMR9Q96QG7 549 aa12.39□□□□□ -0.43
PCDHGA6-201ENST00000517434 UGT2B28Q9BY64 529 aa12.39□□□□□ -0.43
PCDHGA6-201ENST00000517434 ZNF221Q9UK13 617 aa12.39□□□□□ -0.43
PCDHGA6-201ENST00000517434 Q9Y3F1 56 aa12.39□□□□□ -0.43
PCDHGA6-201ENST00000517434 PCDHA2Q9Y5H9 948 aa12.39□□□□□ -0.43
PCDHGA6-201ENST00000517434 PSMD12O00232 456 aaPredicted RBP12.39□□□□□ -0.43
PCDHGA6-201ENST00000517434 CES1P23141 567 aa12.39□□□□□ -0.43
PCDHGA6-201ENST00000517434 RAP1GAPP47736 663 aa12.39□□□□□ -0.43
PCDHGA6-201ENST00000517434 VSTM1Q6UX27 236 aa12.39□□□□□ -0.43
PCDHGA6-201ENST00000517434 LRP10Q7Z4F1 713 aa12.39□□□□□ -0.43
PCDHGA6-201ENST00000517434 DENND6AQ8IWF6 608 aa12.39□□□□□ -0.43
PCDHGA6-201ENST00000517434 C7orf61Q8IZ16 206 aa12.39□□□□□ -0.43
PCDHGA6-201ENST00000517434 KIAA0319LQ8IZA0 1049 aa12.39□□□□□ -0.43
PCDHGA6-201ENST00000517434 PNMA5Q96PV4 448 aa12.39□□□□□ -0.43
PCDHGA6-201ENST00000517434 RMND5AQ9H871 391 aa12.39□□□□□ -0.43
PCDHGA6-201ENST00000517434 ING3Q9NXR8 418 aa12.39□□□□□ -0.43
PCDHGA6-201ENST00000517434 RUVBL2Q9Y230 463 aaKnown RBP12.39□□□□□ -0.43
PCDHGA6-201ENST00000517434 COQ6Q9Y2Z9 468 aa12.39□□□□□ -0.43
PCDHGA6-201ENST00000517434 TK2O00142 265 aa12.38□□□□□ -0.43
PCDHGA6-201ENST00000517434 RBP1P09455 135 aa12.38□□□□□ -0.43
PCDHGA6-201ENST00000517434 NPR3P17342 541 aa12.38□□□□□ -0.43
PCDHGA6-201ENST00000517434 GSSP48637 474 aa12.38□□□□□ -0.43
PCDHGA6-201ENST00000517434 CNTN1Q12860 1018 aa12.38□□□□□ -0.43
PCDHGA6-201ENST00000517434 DGCR6Q14129 220 aa12.38□□□□□ -0.43
PCDHGA6-201ENST00000517434 TYSND1Q2T9J0 566 aa12.38□□□□□ -0.43
PCDHGA6-201ENST00000517434 N4BP2L1Q5TBK1 243 aaPredicted RBP12.38□□□□□ -0.43
PCDHGA6-201ENST00000517434 LRRC17Q8N6Y2 441 aa12.38□□□□□ -0.43
PCDHGA6-201ENST00000517434 MCOLN3Q8TDD5 553 aa12.38□□□□□ -0.43
PCDHGA6-201ENST00000517434 RNF145Q96MT1 663 aa12.38□□□□□ -0.43
PCDHGA6-201ENST00000517434 CDT1Q9H211 546 aa12.38□□□□□ -0.43
PCDHGA6-201ENST00000517434 C11orf49Q9H6J7 331 aa12.38□□□□□ -0.43
PCDHGA6-201ENST00000517434 GPAMQ9HCL2 828 aa12.38□□□□□ -0.43
PCDHGA6-201ENST00000517434 ZSCAN32Q9NX65 697 aa12.38□□□□□ -0.43
PCDHGA6-201ENST00000517434 ENOPH1Q9UHY7 261 aa12.38□□□□□ -0.43
PCDHGA6-201ENST00000517434 ACOT9Q9Y305 439 aa12.38□□□□□ -0.43
PCDHGA6-201ENST00000517434 TOPAZ1Q8N9V7 1692 aa12.38□□□□□ -0.43
PCDHGA6-201ENST00000517434 YDJCA8MPS7 323 aa12.38□□□□□ -0.43
PCDHGA6-201ENST00000517434 HS6ST1O60243 411 aa12.38□□□□□ -0.43
PCDHGA6-201ENST00000517434 LGR5O75473 907 aa12.38□□□□□ -0.43
PCDHGA6-201ENST00000517434 PRLP01236 227 aa12.38□□□□□ -0.43
PCDHGA6-201ENST00000517434 POU1F1P28069 291 aa12.38□□□□□ -0.43
PCDHGA6-201ENST00000517434 SLC25A3Q00325 362 aa12.38□□□□□ -0.43
PCDHGA6-201ENST00000517434 ST3GAL1Q11201 340 aa12.38□□□□□ -0.43
PCDHGA6-201ENST00000517434 BMPR2Q13873 1038 aa12.38□□□□□ -0.43
PCDHGA6-201ENST00000517434 NFIL3Q16649 462 aa12.38□□□□□ -0.43
PCDHGA6-201ENST00000517434 KIAA0408Q6ZU52 694 aa12.38□□□□□ -0.43
PCDHGA6-201ENST00000517434 ZHX1-C8orf76Q96EF9 292 aa12.38□□□□□ -0.43
PCDHGA6-201ENST00000517434 SPASTQ9UBP0 616 aa12.38□□□□□ -0.43
PCDHGA6-201ENST00000517434 SPEF1Q9Y4P9 236 aa12.38□□□□□ -0.43
PCDHGA6-201ENST00000517434 EML1O00423 815 aa12.38□□□□□ -0.43
PCDHGA6-201ENST00000517434 OR56A5P0C7T3 313 aa12.38□□□□□ -0.43
PCDHGA6-201ENST00000517434 CYP2A7P20853 494 aa12.38□□□□□ -0.43
PCDHGA6-201ENST00000517434 KELP23276 732 aa12.38□□□□□ -0.43
PCDHGA6-201ENST00000517434 BNIP1Q12981 228 aa12.38□□□□□ -0.43
PCDHGA6-201ENST00000517434 FASTKQ14296 549 aaKnown RBP12.38□□□□□ -0.43
PCDHGA6-201ENST00000517434 GRM3Q14832 879 aa12.38□□□□□ -0.43
PCDHGA6-201ENST00000517434 FAXCQ5TGI0 409 aa12.38□□□□□ -0.43
PCDHGA6-201ENST00000517434 TYW3Q6IPR3 259 aaKnown RBP12.38□□□□□ -0.43
PCDHGA6-201ENST00000517434 ULK2Q8IYT8 1036 aa12.38□□□□□ -0.43
PCDHGA6-201ENST00000517434 STK40Q8N2I9 435 aa12.38□□□□□ -0.43
PCDHGA6-201ENST00000517434 WDR36Q8NI36 951 aaKnown RBP12.38□□□□□ -0.43
PCDHGA6-201ENST00000517434 WNT8BQ93098 351 aa12.38□□□□□ -0.43
PCDHGA6-201ENST00000517434 TUBGCP5Q96RT8 1024 aa12.38□□□□□ -0.43
PCDHGA6-201ENST00000517434 ACO2Q99798 780 aaKnown RBP12.38□□□□□ -0.43
PCDHGA6-201ENST00000517434 PRRG3Q9BZD7 231 aa12.38□□□□□ -0.43
PCDHGA6-201ENST00000517434 SEMA6BQ9H3T3 888 aa12.38□□□□□ -0.43
PCDHGA6-201ENST00000517434 RAPGEFL1Q9UHV5 662 aa12.38□□□□□ -0.43
PCDHGA6-201ENST00000517434 PCDHGA3Q9Y5H0 932 aa12.38□□□□□ -0.43
PCDHGA6-201ENST00000517434 F8W810 466 aa12.38□□□□□ -0.43
PCDHGA6-201ENST00000517434 HTR1BP28222 390 aa12.38□□□□□ -0.43
PCDHGA6-201ENST00000517434 MMP13P45452 471 aa12.38□□□□□ -0.43
PCDHGA6-201ENST00000517434 PKNOX1P55347 436 aa12.38□□□□□ -0.43
PCDHGA6-201ENST00000517434 PWP1Q13610 501 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms