RNA–Protein interactions for RNA: ENST00000515397.1

VCAN-212, Transcript of versican, humanhuman

TSL 2

Gene VCAN, Length 536 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-212ENST00000515397 PRPF39Q86UA1 669 aaKnown RBP11.68□□□□□ -0.54
VCAN-212ENST00000515397 GATAD2AQ86YP4 633 aa11.68□□□□□ -0.54
VCAN-212ENST00000515397 ARHGAP12Q8IWW6 846 aa11.68□□□□□ -0.54
VCAN-212ENST00000515397 NPWQ8N729 165 aa11.68□□□□□ -0.54
VCAN-212ENST00000515397 PNPLA1Q8N8W4 532 aa11.68□□□□□ -0.54
VCAN-212ENST00000515397 OR2AP1Q8NGE2 309 aa11.68□□□□□ -0.54
VCAN-212ENST00000515397 FNIP1Q8TF40 1166 aa11.68□□□□□ -0.54
VCAN-212ENST00000515397 FAM131CQ96AQ9 280 aa11.68□□□□□ -0.54
VCAN-212ENST00000515397 KLHL32Q96NJ5 620 aa11.68□□□□□ -0.54
VCAN-212ENST00000515397 ZDHHC5Q9C0B5 715 aa11.68□□□□□ -0.54
VCAN-212ENST00000515397 RBSNQ9H1K0 784 aa11.68□□□□□ -0.54
VCAN-212ENST00000515397 SLC32A1Q9H598 525 aa11.68□□□□□ -0.54
VCAN-212ENST00000515397 LRRC19Q9H756 370 aa11.68□□□□□ -0.54
VCAN-212ENST00000515397 TM7SF3Q9NS93 570 aa11.68□□□□□ -0.54
VCAN-212ENST00000515397 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.68□□□□□ -0.54
VCAN-212ENST00000515397 SPTLC3Q9NUV7 552 aa11.68□□□□□ -0.54
VCAN-212ENST00000515397 CTTNBP2NLQ9P2B4 639 aa11.68□□□□□ -0.54
VCAN-212ENST00000515397 LHX3Q9UBR4 397 aa11.68□□□□□ -0.54
VCAN-212ENST00000515397 NENFQ9UMX5 172 aa11.68□□□□□ -0.54
VCAN-212ENST00000515397 GOLGA8CPA6NN73 597 aa11.67□□□□□ -0.54
VCAN-212ENST00000515397 MYO1FO00160 1098 aa11.67□□□□□ -0.54
VCAN-212ENST00000515397 VILLO15195 856 aa11.67□□□□□ -0.54
VCAN-212ENST00000515397 FGF10O15520 208 aaPredicted RBP11.67□□□□□ -0.54
VCAN-212ENST00000515397 SLC7A4O43246 635 aa11.67□□□□□ -0.54
VCAN-212ENST00000515397 LATO43561 262 aa11.67□□□□□ -0.54
VCAN-212ENST00000515397 PIGNO95427 931 aa11.67□□□□□ -0.54
VCAN-212ENST00000515397 POP4O95707 220 aaKnown RBP11.67□□□□□ -0.54
VCAN-212ENST00000515397 PRKCGP05129 697 aa11.67□□□□□ -0.54
VCAN-212ENST00000515397 CD48P09326 243 aa11.67□□□□□ -0.54
VCAN-212ENST00000515397 HNRNPH3P31942 346 aaKnown RBP11.67□□□□□ -0.54
VCAN-212ENST00000515397 PCK1P35558 622 aa11.67□□□□□ -0.54
VCAN-212ENST00000515397 ABL2P42684 1182 aa11.67□□□□□ -0.54
VCAN-212ENST00000515397 CTSKP43235 329 aa11.67□□□□□ -0.54
VCAN-212ENST00000515397 RGRP47804 291 aa11.67□□□□□ -0.54
VCAN-212ENST00000515397 GRIA4P48058 902 aa11.67□□□□□ -0.54
VCAN-212ENST00000515397 SNRPD1P62314 119 aaKnown RBP11.67□□□□□ -0.54
VCAN-212ENST00000515397 ASTE1Q2TB18 679 aaPredicted RBP11.67□□□□□ -0.54
VCAN-212ENST00000515397 ZNF284Q2VY69 593 aa11.67□□□□□ -0.54
VCAN-212ENST00000515397 PARP15Q460N3 678 aa11.67□□□□□ -0.54
VCAN-212ENST00000515397 FAM182AQ5T1J6 154 aa11.67□□□□□ -0.54
VCAN-212ENST00000515397 POLNQ7Z5Q5 900 aa11.67□□□□□ -0.54
VCAN-212ENST00000515397 SPATS2Q86XZ4 545 aaKnown RBP11.67□□□□□ -0.54
VCAN-212ENST00000515397 NAXDQ8IW45 347 aa11.67□□□□□ -0.54
VCAN-212ENST00000515397 ZNF564Q8TBZ8 553 aaPredicted RBP11.67□□□□□ -0.54
VCAN-212ENST00000515397 LRRN4Q8WUT4 740 aa11.67□□□□□ -0.54
VCAN-212ENST00000515397 ISG20Q96AZ6 181 aaKnown RBP11.67□□□□□ -0.54
VCAN-212ENST00000515397 IQCDQ96DY2 449 aa11.67□□□□□ -0.54
VCAN-212ENST00000515397 CNTNAP3BQ96NU0 1288 aa11.67□□□□□ -0.54
VCAN-212ENST00000515397 DNAJC7Q99615 494 aa11.67□□□□□ -0.54
VCAN-212ENST00000515397 HDAC8Q9BY41 377 aa11.67□□□□□ -0.54
VCAN-212ENST00000515397 CNTNAP3Q9BZ76 1288 aa11.67□□□□□ -0.54
VCAN-212ENST00000515397 TRIM5Q9C035 493 aa11.67□□□□□ -0.54
VCAN-212ENST00000515397 DEF6Q9H4E7 631 aa11.67□□□□□ -0.54
VCAN-212ENST00000515397 RETREG1Q9H6L5 497 aa11.67□□□□□ -0.54
VCAN-212ENST00000515397 OSGEPQ9NPF4 335 aa11.67□□□□□ -0.54
VCAN-212ENST00000515397 ABHD10Q9NUJ1 306 aa11.67□□□□□ -0.54
VCAN-212ENST00000515397 KLHL11Q9NVR0 708 aa11.67□□□□□ -0.54
VCAN-212ENST00000515397 ZNHIT6Q9NWK9 470 aaKnown RBP11.67□□□□□ -0.54
VCAN-212ENST00000515397 UBA2Q9UBT2 640 aaPredicted RBP11.67□□□□□ -0.54
VCAN-212ENST00000515397 IP6K2Q9UHH9 426 aa11.67□□□□□ -0.54
VCAN-212ENST00000515397 PLXNA2O75051 1894 aa11.66□□□□□ -0.54
VCAN-212ENST00000515397 IGLON5A6NGN9 336 aa11.66□□□□□ -0.54
VCAN-212ENST00000515397 TLR4O00206 839 aa11.66□□□□□ -0.54
VCAN-212ENST00000515397 RAD51BO15315 384 aa11.66□□□□□ -0.54
VCAN-212ENST00000515397 AKR1B10O60218 316 aa11.66□□□□□ -0.54
VCAN-212ENST00000515397 BUB1BO60566 1050 aaPredicted RBP11.66□□□□□ -0.54
VCAN-212ENST00000515397 PRAMEF11O60813 436 aa11.66□□□□□ -0.54
VCAN-212ENST00000515397 MFAP3LO75121 409 aa11.66□□□□□ -0.54
VCAN-212ENST00000515397 CER1O95813 267 aa11.66□□□□□ -0.54
VCAN-212ENST00000515397 PAK4O96013 591 aaPredicted RBP11.66□□□□□ -0.54
VCAN-212ENST00000515397 GSRP00390 522 aa11.66□□□□□ -0.54
VCAN-212ENST00000515397 ADRB3P13945 408 aa11.66□□□□□ -0.54
VCAN-212ENST00000515397 ITGB7P26010 798 aa11.66□□□□□ -0.54
VCAN-212ENST00000515397 NEK3P51956 506 aa11.66□□□□□ -0.54
VCAN-212ENST00000515397 SLC25A11Q02978 314 aaKnown RBP11.66□□□□□ -0.54
VCAN-212ENST00000515397 BNIP3Q12983 259 aa11.66□□□□□ -0.54
VCAN-212ENST00000515397 DPYSQ14117 519 aa11.66□□□□□ -0.54
VCAN-212ENST00000515397 FGL2Q14314 439 aa11.66□□□□□ -0.54
VCAN-212ENST00000515397 PIGHQ14442 188 aaPredicted RBP11.66□□□□□ -0.54
VCAN-212ENST00000515397 STAT4Q14765 748 aa11.66□□□□□ -0.54
VCAN-212ENST00000515397 SHBQ15464 509 aa11.66□□□□□ -0.54
VCAN-212ENST00000515397 TRIP6Q15654 476 aaKnown RBP11.66□□□□□ -0.54
VCAN-212ENST00000515397 SLC18A3Q16572 532 aa11.66□□□□□ -0.54
VCAN-212ENST00000515397 TSR1Q2NL82 804 aaKnown RBP11.66□□□□□ -0.54
VCAN-212ENST00000515397 BOLA3Q53S33 107 aa11.66□□□□□ -0.54
VCAN-212ENST00000515397 CCDC157Q569K6 752 aa11.66□□□□□ -0.54
VCAN-212ENST00000515397 ZNF805Q5CZA5 627 aa11.66□□□□□ -0.54
VCAN-212ENST00000515397 IL27RAQ6UWB1 636 aa11.66□□□□□ -0.54
VCAN-212ENST00000515397 GDPD4Q6W3E5 623 aa11.66□□□□□ -0.54
VCAN-212ENST00000515397 TTC7BQ86TV6 843 aa11.66□□□□□ -0.54
VCAN-212ENST00000515397 TRIM69Q86WT6 500 aa11.66□□□□□ -0.54
VCAN-212ENST00000515397 HORMAD1Q86X24 394 aa11.66□□□□□ -0.54
VCAN-212ENST00000515397 GAS2L3Q86XJ1 694 aa11.66□□□□□ -0.54
VCAN-212ENST00000515397 TSEN2Q8NCE0 465 aaKnown RBP11.66□□□□□ -0.54
VCAN-212ENST00000515397 RHBDD1Q8TEB9 315 aa11.66□□□□□ -0.54
VCAN-212ENST00000515397 PPP1R16AQ96I34 528 aa11.66□□□□□ -0.54
VCAN-212ENST00000515397 NSMCE3Q96MG7 304 aa11.66□□□□□ -0.54
VCAN-212ENST00000515397 GDAP1L1Q96MZ0 367 aa11.66□□□□□ -0.54
VCAN-212ENST00000515397 KDM4CQ9H3R0 1056 aa11.66□□□□□ -0.54
VCAN-212ENST00000515397 NHEJ1Q9H9Q4 299 aaPredicted RBP11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms