RNA–Protein interactions for RNA: ENST00000514743.5

PDLIM5-219, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-219ENST00000514743 GRTP1Q5TC63 336 aa7.57□□□□□ -1.2
PDLIM5-219ENST00000514743 CYP20A1Q6UW02 462 aa7.57□□□□□ -1.2
PDLIM5-219ENST00000514743 MPZL3Q6UWV2 235 aa7.57□□□□□ -1.2
PDLIM5-219ENST00000514743 VSTM1Q6UX27 236 aa7.57□□□□□ -1.2
PDLIM5-219ENST00000514743 MFSD7Q6UXD7 560 aa7.57□□□□□ -1.2
PDLIM5-219ENST00000514743 NET1Q7Z628 596 aaPredicted RBP7.57□□□□□ -1.2
PDLIM5-219ENST00000514743 CDR2LQ86X02 465 aaPredicted RBP7.57□□□□□ -1.2
PDLIM5-219ENST00000514743 RHPN2Q8IUC4 686 aa7.57□□□□□ -1.2
PDLIM5-219ENST00000514743 ARFGAP1Q8N6T3 406 aa7.57□□□□□ -1.2
PDLIM5-219ENST00000514743 OR8H1Q8NGG4 311 aa7.57□□□□□ -1.2
PDLIM5-219ENST00000514743 LPGAT1Q92604 370 aa7.57□□□□□ -1.2
PDLIM5-219ENST00000514743 MARC2Q969Z3 335 aa7.57□□□□□ -1.2
PDLIM5-219ENST00000514743 ZNF486Q96H40 463 aaPredicted RBP7.57□□□□□ -1.2
PDLIM5-219ENST00000514743 PLEKHA8Q96JA3 519 aa7.57□□□□□ -1.2
PDLIM5-219ENST00000514743 ZNF668Q96K58 619 aaPredicted RBP7.57□□□□□ -1.2
PDLIM5-219ENST00000514743 ADAM33Q9BZ11 813 aa7.57□□□□□ -1.2
PDLIM5-219ENST00000514743 ROPN1BQ9BZX4 212 aaPredicted RBP7.57□□□□□ -1.2
PDLIM5-219ENST00000514743 NARFLQ9H6Q4 476 aa7.57□□□□□ -1.2
PDLIM5-219ENST00000514743 ROPN1Q9HAT0 212 aaPredicted RBP7.57□□□□□ -1.2
PDLIM5-219ENST00000514743 KIF17Q9P2E2 1029 aa7.57□□□□□ -1.2
PDLIM5-219ENST00000514743 MBD2Q9UBB5 411 aa7.57□□□□□ -1.2
PDLIM5-219ENST00000514743 SIX4Q9UIU6 781 aa7.57□□□□□ -1.2
PDLIM5-219ENST00000514743 POLIQ9UNA4 740 aa7.57□□□□□ -1.2
PDLIM5-219ENST00000514743 KCNH4Q9UQ05 1017 aa7.57□□□□□ -1.2
PDLIM5-219ENST00000514743 HEMK1Q9Y5R4 338 aaPredicted RBP7.57□□□□□ -1.2
PDLIM5-219ENST00000514743 CSADQ9Y600 493 aa7.57□□□□□ -1.2
PDLIM5-219ENST00000514743 ACKR2O00590 384 aa7.57□□□□□ -1.2
PDLIM5-219ENST00000514743 SCO2O43819 266 aa7.57□□□□□ -1.2
PDLIM5-219ENST00000514743 SNX3O60493 162 aa7.57□□□□□ -1.2
PDLIM5-219ENST00000514743 ATF2P15336 505 aa7.57□□□□□ -1.2
PDLIM5-219ENST00000514743 EPHB2P29323 1055 aa7.57□□□□□ -1.2
PDLIM5-219ENST00000514743 PTPN7P35236 360 aa7.57□□□□□ -1.2
PDLIM5-219ENST00000514743 C19orf57Q0VDD7 668 aa7.57□□□□□ -1.2
PDLIM5-219ENST00000514743 DUOXA2Q1HG44 320 aa7.57□□□□□ -1.2
PDLIM5-219ENST00000514743 GPAT2Q6NUI2 795 aa7.57□□□□□ -1.2
PDLIM5-219ENST00000514743 SCARA5Q6ZMJ2 495 aa7.57□□□□□ -1.2
PDLIM5-219ENST00000514743 VSIG1Q86XK7 387 aa7.57□□□□□ -1.2
PDLIM5-219ENST00000514743 DCP2Q8IU60 420 aaKnown RBP7.57□□□□□ -1.2
PDLIM5-219ENST00000514743 CLIP4Q8N3C7 705 aa7.57□□□□□ -1.2
PDLIM5-219ENST00000514743 NIPA2Q8N8Q9 360 aa7.57□□□□□ -1.2
PDLIM5-219ENST00000514743 ZFP28Q8NHY6 868 aa7.57□□□□□ -1.2
PDLIM5-219ENST00000514743 ENKURQ8TC29 256 aa7.57□□□□□ -1.2
PDLIM5-219ENST00000514743 INPP5DQ92835 1189 aa7.57□□□□□ -1.2
PDLIM5-219ENST00000514743 TOE1Q96GM8 510 aaKnown RBP7.57□□□□□ -1.2
PDLIM5-219ENST00000514743 ECSITQ9BQ95 431 aa7.57□□□□□ -1.2
PDLIM5-219ENST00000514743 FERMT1Q9BQL6 677 aa7.57□□□□□ -1.2
PDLIM5-219ENST00000514743 SDCBP2Q9H190 292 aa7.57□□□□□ -1.2
PDLIM5-219ENST00000514743 SYNDIG1Q9H7V2 258 aa7.57□□□□□ -1.2
PDLIM5-219ENST00000514743 TIGARQ9NQ88 270 aa7.57□□□□□ -1.2
PDLIM5-219ENST00000514743 PDGFCQ9NRA1 345 aa7.57□□□□□ -1.2
PDLIM5-219ENST00000514743 ADARB2Q9NS39 739 aaKnown RBP7.57□□□□□ -1.2
PDLIM5-219ENST00000514743 EHD3Q9NZN3 535 aa7.57□□□□□ -1.2
PDLIM5-219ENST00000514743 ZNF624Q9P2J8 865 aaPredicted RBP7.57□□□□□ -1.2
PDLIM5-219ENST00000514743 TNFRSF10DQ9UBN6 386 aa7.57□□□□□ -1.2
PDLIM5-219ENST00000514743 DNPEPQ9ULA0 475 aa7.57□□□□□ -1.2
PDLIM5-219ENST00000514743 AGTPBP1Q9UPW5 1226 aa7.57□□□□□ -1.2
PDLIM5-219ENST00000514743 SCN1AP35498 2009 aa7.57□□□□□ -1.2
PDLIM5-219ENST00000514743 TRAV20A0A0B4J274 112 aa7.57□□□□□ -1.2
PDLIM5-219ENST00000514743 CCDC163A0A0D9SF12 145 aa7.57□□□□□ -1.2
PDLIM5-219ENST00000514743 PRSS44E7EML9 344 aa7.57□□□□□ -1.2
PDLIM5-219ENST00000514743 HOXC11O43248 304 aaPredicted RBP7.57□□□□□ -1.2
PDLIM5-219ENST00000514743 MTSS1O43312 755 aa7.57□□□□□ -1.2
PDLIM5-219ENST00000514743 TCEA3O75764 348 aa7.57□□□□□ -1.2
PDLIM5-219ENST00000514743 C22orf31O95567 290 aa7.57□□□□□ -1.2
PDLIM5-219ENST00000514743 MYL3P08590 195 aa7.57□□□□□ -1.2
PDLIM5-219ENST00000514743 JAK1P23458 1154 aa7.57□□□□□ -1.2
PDLIM5-219ENST00000514743 RAP1GAPP47736 663 aa7.57□□□□□ -1.2
PDLIM5-219ENST00000514743 CLCN3P51790 818 aa7.57□□□□□ -1.2
PDLIM5-219ENST00000514743 STX1BP61266 288 aa7.57□□□□□ -1.2
PDLIM5-219ENST00000514743 CAV1Q03135 178 aa7.57□□□□□ -1.2
PDLIM5-219ENST00000514743 CCINQ13939 588 aa7.57□□□□□ -1.2
PDLIM5-219ENST00000514743 CNGA2Q16280 664 aa7.57□□□□□ -1.2
PDLIM5-219ENST00000514743 KYNUQ16719 465 aa7.57□□□□□ -1.2
PDLIM5-219ENST00000514743 PTPN20Q4JDL3 420 aa7.57□□□□□ -1.2
PDLIM5-219ENST00000514743 ANKRD20A4Q4UJ75 823 aa7.57□□□□□ -1.2
PDLIM5-219ENST00000514743 HP1BP3Q5SSJ5 553 aaPredicted RBP7.57□□□□□ -1.2
PDLIM5-219ENST00000514743 ATF7IP2Q5U623 682 aa7.57□□□□□ -1.2
PDLIM5-219ENST00000514743 PLBD1Q6P4A8 553 aa7.57□□□□□ -1.2
PDLIM5-219ENST00000514743 CFAP161Q6P656 301 aa7.57□□□□□ -1.2
PDLIM5-219ENST00000514743 DRICH1Q6PGQ1 229 aaPredicted RBP7.57□□□□□ -1.2
PDLIM5-219ENST00000514743 ERI1Q8IV48 349 aaKnown RBP7.57□□□□□ -1.2
PDLIM5-219ENST00000514743 ZBTB8OSQ8IWT0 167 aa7.57□□□□□ -1.2
PDLIM5-219ENST00000514743 KIAA0319LQ8IZA0 1049 aa7.57□□□□□ -1.2
PDLIM5-219ENST00000514743 FBXL6Q8N531 539 aa7.57□□□□□ -1.2
PDLIM5-219ENST00000514743 LINC01465Q8N7H1 131 aa7.57□□□□□ -1.2
PDLIM5-219ENST00000514743 LPPQ93052 612 aa7.57□□□□□ -1.2
PDLIM5-219ENST00000514743 ACSF2Q96CM8 615 aaPredicted RBP7.57□□□□□ -1.2
PDLIM5-219ENST00000514743 TMEM237Q96Q45 408 aa7.57□□□□□ -1.2
PDLIM5-219ENST00000514743 TMEM79Q9BSE2 394 aa7.57□□□□□ -1.2
PDLIM5-219ENST00000514743 BCO2Q9BYV7 579 aa7.57□□□□□ -1.2
PDLIM5-219ENST00000514743 MKRN2Q9H000 416 aaKnown RBP7.57□□□□□ -1.2
PDLIM5-219ENST00000514743 CDT1Q9H211 546 aa7.57□□□□□ -1.2
PDLIM5-219ENST00000514743 KCNK9Q9NPC2 374 aa7.57□□□□□ -1.2
PDLIM5-219ENST00000514743 ATP13A2Q9NQ11 1180 aa7.57□□□□□ -1.2
PDLIM5-219ENST00000514743 GNEQ9Y223 722 aaKnown RBP7.57□□□□□ -1.2
PDLIM5-219ENST00000514743 AK5Q9Y6K8 562 aa7.57□□□□□ -1.2
PDLIM5-219ENST00000514743 CENPFP49454 3210 aa7.57□□□□□ -1.2
PDLIM5-219ENST00000514743 hCG_1818297A0A087WSY0 165 aa7.56□□□□□ -1.2
PDLIM5-219ENST00000514743 SLC12A8A0AV02 714 aa7.56□□□□□ -1.2
PDLIM5-219ENST00000514743 ADAM11O75078 769 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms