RNA–Protein interactions for RNA: ENST00000513957.1

NEDD4-210, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-210ENST00000513957 DNMT3AQ9Y6K1 912 aaPredicted RBP8.33□□□□□ -1.08
NEDD4-210ENST00000513957 TRPM6Q9BX84 2022 aa8.32□□□□□ -1.08
NEDD4-210ENST00000513957 METTL12A8MUP2 240 aa8.32□□□□□ -1.08
NEDD4-210ENST00000513957 MEI4A8MW99 385 aa8.32□□□□□ -1.08
NEDD4-210ENST00000513957 C10orf142B7Z368 130 aa8.32□□□□□ -1.08
NEDD4-210ENST00000513957 SNPHO15079 494 aa8.32□□□□□ -1.08
NEDD4-210ENST00000513957 MID1O15344 667 aa8.32□□□□□ -1.08
NEDD4-210ENST00000513957 ARHGAP6O43182 974 aa8.32□□□□□ -1.08
NEDD4-210ENST00000513957 SMAD6O43541 496 aaKnown RBP8.32□□□□□ -1.08
NEDD4-210ENST00000513957 PLRG1O43660 514 aaKnown RBP8.32□□□□□ -1.08
NEDD4-210ENST00000513957 SPOPO43791 374 aa8.32□□□□□ -1.08
NEDD4-210ENST00000513957 ZNF821O75541 412 aaPredicted RBP8.32□□□□□ -1.08
NEDD4-210ENST00000513957 RNASEH2AO75792 299 aaKnown RBP8.32□□□□□ -1.08
NEDD4-210ENST00000513957 TMCC1O94876 653 aa8.32□□□□□ -1.08
NEDD4-210ENST00000513957 DKK1O94907 266 aa8.32□□□□□ -1.08
NEDD4-210ENST00000513957 POP4O95707 220 aaKnown RBP8.32□□□□□ -1.08
NEDD4-210ENST00000513957 CD160O95971 181 aa8.32□□□□□ -1.08
NEDD4-210ENST00000513957 TCF4P15884 667 aa8.32□□□□□ -1.08
NEDD4-210ENST00000513957 ZFXP17010 805 aaPredicted RBP8.32□□□□□ -1.08
NEDD4-210ENST00000513957 MX2P20592 715 aa8.32□□□□□ -1.08
NEDD4-210ENST00000513957 TGM1P22735 817 aa8.32□□□□□ -1.08
NEDD4-210ENST00000513957 GLDCP23378 1020 aa8.32□□□□□ -1.08
NEDD4-210ENST00000513957 ITGB7P26010 798 aa8.32□□□□□ -1.08
NEDD4-210ENST00000513957 DRD3P35462 400 aa8.32□□□□□ -1.08
NEDD4-210ENST00000513957 NOP2P46087 812 aaKnown RBP8.32□□□□□ -1.08
NEDD4-210ENST00000513957 PSMD8P48556 350 aa8.32□□□□□ -1.08
NEDD4-210ENST00000513957 CSNK1DP48730 415 aa8.32□□□□□ -1.08
NEDD4-210ENST00000513957 RENBPP51606 427 aa8.32□□□□□ -1.08
NEDD4-210ENST00000513957 CCR5P51681 352 aa8.32□□□□□ -1.08
NEDD4-210ENST00000513957 SUOXP51687 545 aa8.32□□□□□ -1.08
NEDD4-210ENST00000513957 CCNHP51946 323 aaPredicted RBP8.32□□□□□ -1.08
NEDD4-210ENST00000513957 LIMK1P53667 647 aa8.32□□□□□ -1.08
NEDD4-210ENST00000513957 ADPRHP54922 357 aa8.32□□□□□ -1.08
NEDD4-210ENST00000513957 RHOAP61586 193 aa8.32□□□□□ -1.08
NEDD4-210ENST00000513957 CREB5Q02930 508 aa8.32□□□□□ -1.08
NEDD4-210ENST00000513957 NSUN2Q08J23 767 aaKnown RBP eCLIP8.32□□□□□ -1.08
NEDD4-210ENST00000513957 PAFAH1B3Q15102 231 aaKnown RBP8.32□□□□□ -1.08
NEDD4-210ENST00000513957 LPAL2Q16609 132 aa8.32□□□□□ -1.08
NEDD4-210ENST00000513957 DUOXA1Q1HG43 343 aa8.32□□□□□ -1.08
NEDD4-210ENST00000513957 ODF2Q5BJF6 829 aa8.32□□□□□ -1.08
NEDD4-210ENST00000513957 DAB2IPQ5VWQ8 1189 aa8.32□□□□□ -1.08
NEDD4-210ENST00000513957 TIGD7Q6NT04 549 aaPredicted RBP8.32□□□□□ -1.08
NEDD4-210ENST00000513957 SLC23A3Q6PIS1 610 aa8.32□□□□□ -1.08
NEDD4-210ENST00000513957 LINGO4Q6UY18 593 aa8.32□□□□□ -1.08
NEDD4-210ENST00000513957 PRR23CQ6ZRP0 262 aa8.32□□□□□ -1.08
NEDD4-210ENST00000513957 TMEM139Q8IV31 216 aa8.32□□□□□ -1.08
NEDD4-210ENST00000513957 ARHGAP12Q8IWW6 846 aa8.32□□□□□ -1.08
NEDD4-210ENST00000513957 HDDC3Q8N4P3 179 aa8.32□□□□□ -1.08
NEDD4-210ENST00000513957 NPWQ8N729 165 aa8.32□□□□□ -1.08
NEDD4-210ENST00000513957 C12orf50Q8NA57 414 aaPredicted RBP8.32□□□□□ -1.08
NEDD4-210ENST00000513957 ARMC2Q8NEN0 867 aa8.32□□□□□ -1.08
NEDD4-210ENST00000513957 HCAR2Q8TDS4 363 aa8.32□□□□□ -1.08
NEDD4-210ENST00000513957 NSMCE1Q8WV22 266 aa8.32□□□□□ -1.08
NEDD4-210ENST00000513957 HSPA12BQ96MM6 686 aa8.32□□□□□ -1.08
NEDD4-210ENST00000513957 ZNF830Q96NB3 372 aaPredicted RBP8.32□□□□□ -1.08
NEDD4-210ENST00000513957 TUBGCP5Q96RT8 1024 aa8.32□□□□□ -1.08
NEDD4-210ENST00000513957 GPR174Q9BXC1 333 aa8.32□□□□□ -1.08
NEDD4-210ENST00000513957 CALN1Q9BXU9 219 aa8.32□□□□□ -1.08
NEDD4-210ENST00000513957 HDAC8Q9BY41 377 aa8.32□□□□□ -1.08
NEDD4-210ENST00000513957 MAGEB5Q9BZ81 275 aa8.32□□□□□ -1.08
NEDD4-210ENST00000513957 CPEB1Q9BZB8 566 aaKnown RBP8.32□□□□□ -1.08
NEDD4-210ENST00000513957 TSGA10Q9BZW7 698 aa8.32□□□□□ -1.08
NEDD4-210ENST00000513957 ZDHHC5Q9C0B5 715 aa8.32□□□□□ -1.08
NEDD4-210ENST00000513957 SLC39A8Q9C0K1 460 aa8.32□□□□□ -1.08
NEDD4-210ENST00000513957 SLC6A17Q9H1V8 727 aa8.32□□□□□ -1.08
NEDD4-210ENST00000513957 ARRDC1-AS1Q9H2J1 176 aa8.32□□□□□ -1.08
NEDD4-210ENST00000513957 SP110Q9HB58 689 aa8.32□□□□□ -1.08
NEDD4-210ENST00000513957 PREBQ9HCU5 417 aa8.32□□□□□ -1.08
NEDD4-210ENST00000513957 AMACRQ9UHK6 382 aa8.32□□□□□ -1.08
NEDD4-210ENST00000513957 PILRBQ9UKJ0 227 aa8.32□□□□□ -1.08
NEDD4-210ENST00000513957 ZBTB32Q9Y2Y4 487 aaPredicted RBP8.32□□□□□ -1.08
NEDD4-210ENST00000513957 GVINP1Q7Z2Y8 2422 aa8.32□□□□□ -1.08
NEDD4-210ENST00000513957 EP300Q09472 2414 aaPredicted RBP8.31□□□□□ -1.08
NEDD4-210ENST00000513957 GPR179Q6PRD1 2367 aa8.31□□□□□ -1.08
NEDD4-210ENST00000513957 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.31□□□□□ -1.08
NEDD4-210ENST00000513957 A0A1B0GTW7 788 aa8.31□□□□□ -1.08
NEDD4-210ENST00000513957 A0A1W2PP55 124 aa8.31□□□□□ -1.08
NEDD4-210ENST00000513957 A0A1W2PQ67 120 aa8.31□□□□□ -1.08
NEDD4-210ENST00000513957 GOLGA6L3A6NEY3 463 aa8.31□□□□□ -1.08
NEDD4-210ENST00000513957 K7ERQ8 282 aa8.31□□□□□ -1.08
NEDD4-210ENST00000513957 DFFAO00273 331 aa8.31□□□□□ -1.08
NEDD4-210ENST00000513957 KHNYNO15037 678 aaKnown RBP8.31□□□□□ -1.08
NEDD4-210ENST00000513957 LATO43561 262 aa8.31□□□□□ -1.08
NEDD4-210ENST00000513957 NDUFB5O43674 189 aa8.31□□□□□ -1.08
NEDD4-210ENST00000513957 AP1G1O43747 822 aa8.31□□□□□ -1.08
NEDD4-210ENST00000513957 PALMO75781 387 aa8.31□□□□□ -1.08
NEDD4-210ENST00000513957 ZNF189O75820 626 aaPredicted RBP8.31□□□□□ -1.08
NEDD4-210ENST00000513957 VAV1P15498 845 aa8.31□□□□□ -1.08
NEDD4-210ENST00000513957 KDELR1P24390 212 aa8.31□□□□□ -1.08
NEDD4-210ENST00000513957 IL4RP24394 825 aa8.31□□□□□ -1.08
NEDD4-210ENST00000513957 CD27P26842 260 aa8.31□□□□□ -1.08
NEDD4-210ENST00000513957 ACSL1P33121 698 aa8.31□□□□□ -1.08
NEDD4-210ENST00000513957 PTGER3P43115 390 aa8.31□□□□□ -1.08
NEDD4-210ENST00000513957 PAPOLAP51003 745 aaKnown RBP8.31□□□□□ -1.08
NEDD4-210ENST00000513957 NEK3P51956 506 aa8.31□□□□□ -1.08
NEDD4-210ENST00000513957 TAS2R40P59535 323 aa8.31□□□□□ -1.08
NEDD4-210ENST00000513957 SPEM2Q0P670 501 aa8.31□□□□□ -1.08
NEDD4-210ENST00000513957 KIF5AQ12840 1032 aa8.31□□□□□ -1.08
NEDD4-210ENST00000513957 ANKRD20A8PQ5CZ79 823 aa8.31□□□□□ -1.08
NEDD4-210ENST00000513957 ZNF805Q5CZA5 627 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms