RNA–Protein interactions for RNA: ENST00000512928.1

KDM3B-208, Transcript of lysine demethylase 3B, humanhuman

TSL 2

Gene KDM3B, Length 627 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-208ENST00000512928 ZSCAN5CA6NGD5 496 aaPredicted RBP6.61□□□□□ -1.35
KDM3B-208ENST00000512928 TMEM110-MUSTN1A8MSY1 372 aa6.61□□□□□ -1.35
KDM3B-208ENST00000512928 PRAMEF26H0Y7S4 382 aa6.61□□□□□ -1.35
KDM3B-208ENST00000512928 H0Y8X5 98 aa6.61□□□□□ -1.35
KDM3B-208ENST00000512928 H3BRJ5 948 aa6.61□□□□□ -1.35
KDM3B-208ENST00000512928 TLR4O00206 839 aa6.61□□□□□ -1.35
KDM3B-208ENST00000512928 VILLO15195 856 aa6.61□□□□□ -1.35
KDM3B-208ENST00000512928 FLRT2O43155 660 aa6.61□□□□□ -1.35
KDM3B-208ENST00000512928 HYAL3O43820 417 aaPredicted RBP6.61□□□□□ -1.35
KDM3B-208ENST00000512928 LRCH4O75427 683 aa6.61□□□□□ -1.35
KDM3B-208ENST00000512928 GJB3O75712 270 aa6.61□□□□□ -1.35
KDM3B-208ENST00000512928 WNT1P04628 370 aa6.61□□□□□ -1.35
KDM3B-208ENST00000512928 UGT2B4P06133 528 aa6.61□□□□□ -1.35
KDM3B-208ENST00000512928 ITGAVP06756 1048 aa6.61□□□□□ -1.35
KDM3B-208ENST00000512928 FAM228BP0C875 321 aa6.61□□□□□ -1.35
KDM3B-208ENST00000512928 C7P10643 843 aa6.61□□□□□ -1.35
KDM3B-208ENST00000512928 ADRB3P13945 408 aa6.61□□□□□ -1.35
KDM3B-208ENST00000512928 XPAP23025 273 aaPredicted RBP6.61□□□□□ -1.35
KDM3B-208ENST00000512928 ITGB7P26010 798 aa6.61□□□□□ -1.35
KDM3B-208ENST00000512928 AKT2P31751 481 aa6.61□□□□□ -1.35
KDM3B-208ENST00000512928 EIF4A3P38919 411 aaKnown RBP6.61□□□□□ -1.35
KDM3B-208ENST00000512928 ARL4AP40617 200 aa6.61□□□□□ -1.35
KDM3B-208ENST00000512928 CTSKP43235 329 aa6.61□□□□□ -1.35
KDM3B-208ENST00000512928 YBEYP58557 167 aaPredicted RBP6.61□□□□□ -1.35
KDM3B-208ENST00000512928 TAS2R38P59533 333 aa6.61□□□□□ -1.35
KDM3B-208ENST00000512928 FAM193AP78312 1265 aa6.61□□□□□ -1.35
KDM3B-208ENST00000512928 RAD51Q06609 339 aa6.61□□□□□ -1.35
KDM3B-208ENST00000512928 TRIM14Q14142 442 aa6.61□□□□□ -1.35
KDM3B-208ENST00000512928 KRT81Q14533 505 aa6.61□□□□□ -1.35
KDM3B-208ENST00000512928 ASTE1Q2TB18 679 aaPredicted RBP6.61□□□□□ -1.35
KDM3B-208ENST00000512928 INAVAQ3KP66 663 aa6.61□□□□□ -1.35
KDM3B-208ENST00000512928 LRRC73Q5JTD7 316 aa6.61□□□□□ -1.35
KDM3B-208ENST00000512928 ZFYVE27Q5T4F4 411 aa6.61□□□□□ -1.35
KDM3B-208ENST00000512928 ARTNQ5T4W7 220 aa6.61□□□□□ -1.35
KDM3B-208ENST00000512928 SEL1L3Q68CR1 1132 aa6.61□□□□□ -1.35
KDM3B-208ENST00000512928 SPECC1LQ69YQ0 1117 aa6.61□□□□□ -1.35
KDM3B-208ENST00000512928 ALKBH5Q6P6C2 394 aaKnown RBP6.61□□□□□ -1.35
KDM3B-208ENST00000512928 GDPD4Q6W3E5 623 aa6.61□□□□□ -1.35
KDM3B-208ENST00000512928 RFX8Q6ZV50 586 aa6.61□□□□□ -1.35
KDM3B-208ENST00000512928 PARS2Q7L3T8 475 aaKnown RBP6.61□□□□□ -1.35
KDM3B-208ENST00000512928 PIP4P1Q86T03 277 aa6.61□□□□□ -1.35
KDM3B-208ENST00000512928 TRIM69Q86WT6 500 aa6.61□□□□□ -1.35
KDM3B-208ENST00000512928 GATAD2AQ86YP4 633 aa6.61□□□□□ -1.35
KDM3B-208ENST00000512928 OR2AP1Q8NGE2 309 aa6.61□□□□□ -1.35
KDM3B-208ENST00000512928 CTNNBL1Q8WYA6 563 aaPredicted RBP6.61□□□□□ -1.35
KDM3B-208ENST00000512928 BTBD6Q96KE9 485 aa6.61□□□□□ -1.35
KDM3B-208ENST00000512928 KLHL32Q96NJ5 620 aa6.61□□□□□ -1.35
KDM3B-208ENST00000512928 PEBP4Q96S96 227 aa6.61□□□□□ -1.35
KDM3B-208ENST00000512928 KCTD15Q96SI1 283 aaPredicted RBP6.61□□□□□ -1.35
KDM3B-208ENST00000512928 ELF4Q99607 663 aaPredicted RBP6.61□□□□□ -1.35
KDM3B-208ENST00000512928 ORAI3Q9BRQ5 295 aa6.61□□□□□ -1.35
KDM3B-208ENST00000512928 NUP85Q9BW27 656 aa6.61□□□□□ -1.35
KDM3B-208ENST00000512928 TMEM121BQ9BXQ6 578 aaPredicted RBP6.61□□□□□ -1.35
KDM3B-208ENST00000512928 CALN1Q9BXU9 219 aa6.61□□□□□ -1.35
KDM3B-208ENST00000512928 HDAC8Q9BY41 377 aa6.61□□□□□ -1.35
KDM3B-208ENST00000512928 KLC2Q9H0B6 622 aa6.61□□□□□ -1.35
KDM3B-208ENST00000512928 ISCUQ9H1K1 167 aa6.61□□□□□ -1.35
KDM3B-208ENST00000512928 KDM4CQ9H3R0 1056 aa6.61□□□□□ -1.35
KDM3B-208ENST00000512928 RETREG1Q9H6L5 497 aa6.61□□□□□ -1.35
KDM3B-208ENST00000512928 OSGEPQ9NPF4 335 aa6.61□□□□□ -1.35
KDM3B-208ENST00000512928 STAU2Q9NUL3 570 aaKnown RBP eCLIP6.61□□□□□ -1.35
KDM3B-208ENST00000512928 DONSONQ9NYP3 566 aa6.61□□□□□ -1.35
KDM3B-208ENST00000512928 CTTNBP2NLQ9P2B4 639 aa6.61□□□□□ -1.35
KDM3B-208ENST00000512928 UBA2Q9UBT2 640 aaPredicted RBP6.61□□□□□ -1.35
KDM3B-208ENST00000512928 TPX2Q9ULW0 747 aaKnown RBP6.61□□□□□ -1.35
KDM3B-208ENST00000512928 DMTF1Q9Y222 760 aa6.61□□□□□ -1.35
KDM3B-208ENST00000512928 ITM2BQ9Y287 266 aa6.61□□□□□ -1.35
KDM3B-208ENST00000512928 WASF2Q9Y6W5 498 aa6.61□□□□□ -1.35
KDM3B-208ENST00000512928 ARHGAP42A6NI28 874 aa6.6□□□□□ -1.35
KDM3B-208ENST00000512928 C16orf96A6NNT2 1141 aa6.6□□□□□ -1.35
KDM3B-208ENST00000512928 UPK3BL1B0FP48 263 aa6.6□□□□□ -1.35
KDM3B-208ENST00000512928 EIF3CLB5ME19 914 aaKnown RBP6.6□□□□□ -1.35
KDM3B-208ENST00000512928 UPK3BL2E5RIL1 263 aa6.6□□□□□ -1.35
KDM3B-208ENST00000512928 J3KR12 359 aa6.6□□□□□ -1.35
KDM3B-208ENST00000512928 LATO43561 262 aa6.6□□□□□ -1.35
KDM3B-208ENST00000512928 AKR1B10O60218 316 aa6.6□□□□□ -1.35
KDM3B-208ENST00000512928 MAGEC1O60732 1142 aa6.6□□□□□ -1.35
KDM3B-208ENST00000512928 SDC3O75056 442 aa6.6□□□□□ -1.35
KDM3B-208ENST00000512928 MFAP3LO75121 409 aa6.6□□□□□ -1.35
KDM3B-208ENST00000512928 ZNF821O75541 412 aaPredicted RBP6.6□□□□□ -1.35
KDM3B-208ENST00000512928 PALMO75781 387 aa6.6□□□□□ -1.35
KDM3B-208ENST00000512928 PIGNO95427 931 aa6.6□□□□□ -1.35
KDM3B-208ENST00000512928 POP4O95707 220 aaKnown RBP6.6□□□□□ -1.35
KDM3B-208ENST00000512928 CD160O95971 181 aa6.6□□□□□ -1.35
KDM3B-208ENST00000512928 GSRP00390 522 aa6.6□□□□□ -1.35
KDM3B-208ENST00000512928 FTH1P19P0C7X4 201 aa6.6□□□□□ -1.35
KDM3B-208ENST00000512928 THEGLP0DJG4 465 aa6.6□□□□□ -1.35
KDM3B-208ENST00000512928 TCF4P15884 667 aa6.6□□□□□ -1.35
KDM3B-208ENST00000512928 ERCC2P18074 760 aa6.6□□□□□ -1.35
KDM3B-208ENST00000512928 HTR7P34969 479 aa6.6□□□□□ -1.35
KDM3B-208ENST00000512928 NUDT1P36639 197 aa6.6□□□□□ -1.35
KDM3B-208ENST00000512928 GRK6P43250 576 aa6.6□□□□□ -1.35
KDM3B-208ENST00000512928 ARRB1P49407 418 aaPredicted RBP6.6□□□□□ -1.35
KDM3B-208ENST00000512928 PAPOLAP51003 745 aaKnown RBP6.6□□□□□ -1.35
KDM3B-208ENST00000512928 NDST2P52849 883 aa6.6□□□□□ -1.35
KDM3B-208ENST00000512928 CLDN2P57739 230 aa6.6□□□□□ -1.35
KDM3B-208ENST00000512928 NXPH1P58417 271 aa6.6□□□□□ -1.35
KDM3B-208ENST00000512928 RPS21P63220 83 aaKnown RBP6.6□□□□□ -1.35
KDM3B-208ENST00000512928 SGCGQ13326 291 aa6.6□□□□□ -1.35
KDM3B-208ENST00000512928 SERINC3Q13530 473 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms