RNA–Protein interactions for RNA: ENST00000512756.5

COL11A1-210, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL11A1, Length 5,442 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-210ENST00000512756 C3orf18Q9UK00 162 aa12.61□□□□□ -0.39
COL11A1-210ENST00000512756 TRAFD1O14545 582 aaPredicted RBP12.6□□□□□ -0.39
COL11A1-210ENST00000512756 CD86P42081 329 aa12.6□□□□□ -0.39
COL11A1-210ENST00000512756 CRADDP78560 199 aa12.6□□□□□ -0.39
COL11A1-210ENST00000512756 IRF8Q02556 426 aa12.6□□□□□ -0.39
COL11A1-210ENST00000512756 COX10Q12887 443 aa12.6□□□□□ -0.39
COL11A1-210ENST00000512756 PDK3Q15120 406 aa12.6□□□□□ -0.39
COL11A1-210ENST00000512756 INSCQ1MX18 579 aa12.6□□□□□ -0.39
COL11A1-210ENST00000512756 TXNDC11Q6PKC3 985 aa12.6□□□□□ -0.39
COL11A1-210ENST00000512756 TTC7BQ86TV6 843 aa12.6□□□□□ -0.39
COL11A1-210ENST00000512756 GPC2Q8N158 579 aa12.6□□□□□ -0.39
COL11A1-210ENST00000512756 C4orf32Q8N8J7 132 aa12.6□□□□□ -0.39
COL11A1-210ENST00000512756 ALG3Q92685 438 aa12.6□□□□□ -0.39
COL11A1-210ENST00000512756 TRIM63Q969Q1 353 aa12.6□□□□□ -0.39
COL11A1-210ENST00000512756 TBCDQ9BTW9 1192 aa12.6□□□□□ -0.39
COL11A1-210ENST00000512756 ZYG11BQ9C0D3 744 aa12.6□□□□□ -0.39
COL11A1-210ENST00000512756 LHX5Q9H2C1 402 aa12.6□□□□□ -0.39
COL11A1-210ENST00000512756 RNPEPQ9H4A4 650 aa12.6□□□□□ -0.39
COL11A1-210ENST00000512756 MYPNQ86TC9 1320 aa12.6□□□□□ -0.39
COL11A1-210ENST00000512756 TCRBV9S1A1TA0A576 114 aa12.6□□□□□ -0.39
COL11A1-210ENST00000512756 SPATA31C2B4DYI2 1134 aa12.6□□□□□ -0.39
COL11A1-210ENST00000512756 CABYRO75952 493 aa12.6□□□□□ -0.39
COL11A1-210ENST00000512756 ATP6V1C1P21283 382 aa12.6□□□□□ -0.39
COL11A1-210ENST00000512756 MATKP42679 507 aa12.6□□□□□ -0.39
COL11A1-210ENST00000512756 TAS2R40P59535 323 aa12.6□□□□□ -0.39
COL11A1-210ENST00000512756 ATP6V0D1P61421 351 aa12.6□□□□□ -0.39
COL11A1-210ENST00000512756 GNA13Q14344 377 aa12.6□□□□□ -0.39
COL11A1-210ENST00000512756 BROXQ5VW32 411 aa12.6□□□□□ -0.39
COL11A1-210ENST00000512756 MFSD5Q6N075 450 aa12.6□□□□□ -0.39
COL11A1-210ENST00000512756 ABRAXAS1Q6UWZ7 409 aa12.6□□□□□ -0.39
COL11A1-210ENST00000512756 KIAA0319LQ8IZA0 1049 aa12.6□□□□□ -0.39
COL11A1-210ENST00000512756 MAGEE2Q8TD90 523 aaPredicted RBP12.6□□□□□ -0.39
COL11A1-210ENST00000512756 MLPHQ9BV36 600 aaPredicted RBP12.6□□□□□ -0.39
COL11A1-210ENST00000512756 REXO4Q9GZR2 422 aaKnown RBP12.6□□□□□ -0.39
COL11A1-210ENST00000512756 FBXO6Q9NRD1 293 aaPredicted RBP12.6□□□□□ -0.39
COL11A1-210ENST00000512756 ENTPD5O75356 428 aa12.6□□□□□ -0.39
COL11A1-210ENST00000512756 CALCAP01258 141 aa12.6□□□□□ -0.39
COL11A1-210ENST00000512756 FYNP06241 537 aa12.6□□□□□ -0.39
COL11A1-210ENST00000512756 FEN1P39748 380 aaKnown RBP12.6□□□□□ -0.39
COL11A1-210ENST00000512756 ABCG1P45844 678 aa12.6□□□□□ -0.39
COL11A1-210ENST00000512756 FUT2Q10981 343 aa12.6□□□□□ -0.39
COL11A1-210ENST00000512756 SGCGQ13326 291 aa12.6□□□□□ -0.39
COL11A1-210ENST00000512756 ACOX1Q15067 660 aa12.6□□□□□ -0.39
COL11A1-210ENST00000512756 POTEHQ6S545 545 aa12.6□□□□□ -0.39
COL11A1-210ENST00000512756 MARK2Q7KZI7 788 aaKnown RBP12.6□□□□□ -0.39
COL11A1-210ENST00000512756 HEATR4Q86WZ0 1026 aa12.6□□□□□ -0.39
COL11A1-210ENST00000512756 OR5B17Q8NGF7 314 aa12.6□□□□□ -0.39
COL11A1-210ENST00000512756 MAN1C1Q9NR34 630 aa12.6□□□□□ -0.39
COL11A1-210ENST00000512756 SPG21Q9NZD8 308 aa12.6□□□□□ -0.39
COL11A1-210ENST00000512756 BCLAF3A2AJT9 711 aaKnown RBP12.6□□□□□ -0.39
COL11A1-210ENST00000512756 TMEM191CA6NGB0 347 aa12.6□□□□□ -0.39
COL11A1-210ENST00000512756 FAM47E-STBD1D6RA91 191 aa12.6□□□□□ -0.39
COL11A1-210ENST00000512756 SGTAO43765 313 aa12.6□□□□□ -0.39
COL11A1-210ENST00000512756 STX11O75558 287 aa12.6□□□□□ -0.39
COL11A1-210ENST00000512756 KRT36O76013 467 aa12.6□□□□□ -0.39
COL11A1-210ENST00000512756 TAB1Q15750 504 aa12.6□□□□□ -0.39
COL11A1-210ENST00000512756 IRF2BP1Q8IU81 584 aa12.6□□□□□ -0.39
COL11A1-210ENST00000512756 ULK2Q8IYT8 1036 aa12.6□□□□□ -0.39
COL11A1-210ENST00000512756 SFRP1Q8N474 314 aa12.6□□□□□ -0.39
COL11A1-210ENST00000512756 ENKURQ8TC29 256 aa12.6□□□□□ -0.39
COL11A1-210ENST00000512756 NLNQ9BYT8 704 aa12.6□□□□□ -0.39
COL11A1-210ENST00000512756 FHDC1Q9C0D6 1143 aaPredicted RBP12.6□□□□□ -0.39
COL11A1-210ENST00000512756 FANCEQ9HB96 536 aa12.6□□□□□ -0.39
COL11A1-210ENST00000512756 THG1LQ9NWX6 298 aaKnown RBP12.6□□□□□ -0.39
COL11A1-210ENST00000512756 PRKAG3Q9UGI9 489 aa12.6□□□□□ -0.39
COL11A1-210ENST00000512756 TMEM131LA2VDJ0 1609 aa12.6□□□□□ -0.39
COL11A1-210ENST00000512756 EFCAB10A6NFE3 127 aa12.59□□□□□ -0.39
COL11A1-210ENST00000512756 TSPAN19P0C672 248 aa12.59□□□□□ -0.39
COL11A1-210ENST00000512756 HOXB6P17509 224 aaKnown RBP12.59□□□□□ -0.39
COL11A1-210ENST00000512756 WEE1P30291 646 aa12.59□□□□□ -0.39
COL11A1-210ENST00000512756 ADSSP30520 456 aa12.59□□□□□ -0.39
COL11A1-210ENST00000512756 MAPKAPK3Q16644 382 aa12.59□□□□□ -0.39
COL11A1-210ENST00000512756 TMC5Q6UXY8 1006 aa12.59□□□□□ -0.39
COL11A1-210ENST00000512756 WDR48Q8TAF3 677 aa12.59□□□□□ -0.39
COL11A1-210ENST00000512756 ADAM2Q99965 735 aa12.59□□□□□ -0.39
COL11A1-210ENST00000512756 LYPLAL1Q5VWZ2 237 aa12.59□□□□□ -0.39
COL11A1-210ENST00000512756 FBXO30Q8TB52 745 aa12.59□□□□□ -0.39
COL11A1-210ENST00000512756 SMAD5Q99717 465 aaKnown RBP12.59□□□□□ -0.39
COL11A1-210ENST00000512756 TRMOQ9BU70 441 aa12.59□□□□□ -0.39
COL11A1-210ENST00000512756 COMMD3-BMI1R4GMX3 469 aa12.59□□□□□ -0.39
COL11A1-210ENST00000512756 ARHGEF28Q8N1W1 1705 aaKnown RBP12.59□□□□□ -0.39
COL11A1-210ENST00000512756 LCA5LO95447 670 aa12.59□□□□□ -0.39
COL11A1-210ENST00000512756 ALOX12P18054 663 aa12.59□□□□□ -0.39
COL11A1-210ENST00000512756 ITGB5P18084 799 aa12.59□□□□□ -0.39
COL11A1-210ENST00000512756 CCNA2P20248 432 aa12.59□□□□□ -0.39
COL11A1-210ENST00000512756 RPL9P32969 192 aaKnown RBP12.59□□□□□ -0.39
COL11A1-210ENST00000512756 RPL3P39023 403 aaKnown RBP12.59□□□□□ -0.39
COL11A1-210ENST00000512756 CDC42P60953 191 aa12.59□□□□□ -0.39
COL11A1-210ENST00000512756 TSHZ1Q6ZSZ6 1077 aa12.59□□□□□ -0.39
COL11A1-210ENST00000512756 METTL3Q86U44 580 aaKnown RBP12.59□□□□□ -0.39
COL11A1-210ENST00000512756 CORO2BQ9UQ03 480 aa12.59□□□□□ -0.39
COL11A1-210ENST00000512756 A0A088AWK7 358 aa12.59□□□□□ -0.39
COL11A1-210ENST00000512756 PEX11AO75192 247 aa12.59□□□□□ -0.39
COL11A1-210ENST00000512756 ULK1O75385 1050 aa12.59□□□□□ -0.39
COL11A1-210ENST00000512756 ERCC2P18074 760 aa12.59□□□□□ -0.39
COL11A1-210ENST00000512756 ZNF10P21506 573 aaPredicted RBP12.59□□□□□ -0.39
COL11A1-210ENST00000512756 CES1P23141 567 aa12.59□□□□□ -0.39
COL11A1-210ENST00000512756 GSTT1P30711 240 aa12.59□□□□□ -0.39
COL11A1-210ENST00000512756 PRKG2Q13237 762 aa12.59□□□□□ -0.39
COL11A1-210ENST00000512756 ARSHQ5FYA8 562 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms