RNA–Protein interactions for RNA: ENST00000511774.1

HMGCS1-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 4

Gene HMGCS1, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-206ENST00000511774 D6RAR5 112 aa19.38■□□□□ 0.69
HMGCS1-206ENST00000511774 GRAP2O75791 330 aa19.38■□□□□ 0.69
HMGCS1-206ENST00000511774 TSHRP16473 764 aa19.38■□□□□ 0.69
HMGCS1-206ENST00000511774 CDH4P55283 916 aa19.38■□□□□ 0.69
HMGCS1-206ENST00000511774 CCL7P80098 99 aa19.38■□□□□ 0.69
HMGCS1-206ENST00000511774 CDK17Q00537 523 aa19.38■□□□□ 0.69
HMGCS1-206ENST00000511774 CCDC15Q0P6D6 951 aa19.38■□□□□ 0.69
HMGCS1-206ENST00000511774 SDK2Q58EX2 2172 aa19.38■□□□□ 0.69
HMGCS1-206ENST00000511774 KYQ8NBH2 561 aa19.38■□□□□ 0.69
HMGCS1-206ENST00000511774 OR7D4Q8NG98 312 aa19.38■□□□□ 0.69
HMGCS1-206ENST00000511774 TRIM62Q9BVG3 475 aa19.38■□□□□ 0.69
HMGCS1-206ENST00000511774 SIK2Q9H0K1 926 aa19.38■□□□□ 0.69
HMGCS1-206ENST00000511774 CNTN6Q9UQ52 1028 aa19.38■□□□□ 0.69
HMGCS1-206ENST00000511774 FPGTO14772 594 aa19.37■□□□□ 0.69
HMGCS1-206ENST00000511774 AP1G1O43747 822 aa19.37■□□□□ 0.69
HMGCS1-206ENST00000511774 RHOCP08134 193 aa19.37■□□□□ 0.69
HMGCS1-206ENST00000511774 SLC2A3P11169 496 aa19.37■□□□□ 0.69
HMGCS1-206ENST00000511774 TFE3P19532 575 aaPredicted RBP19.37■□□□□ 0.69
HMGCS1-206ENST00000511774 ITIH1P19827 911 aa19.37■□□□□ 0.69
HMGCS1-206ENST00000511774 ITGB7P26010 798 aa19.37■□□□□ 0.69
HMGCS1-206ENST00000511774 L1CAMP32004 1257 aa19.37■□□□□ 0.69
HMGCS1-206ENST00000511774 GKP32189 559 aa19.37■□□□□ 0.69
HMGCS1-206ENST00000511774 IGFALSP35858 605 aa19.37■□□□□ 0.69
HMGCS1-206ENST00000511774 ETV5P41161 510 aa19.37■□□□□ 0.69
HMGCS1-206ENST00000511774 KRT83P78385 493 aa19.37■□□□□ 0.69
HMGCS1-206ENST00000511774 UBAP2LQ14157 1087 aaKnown RBP19.37■□□□□ 0.69
HMGCS1-206ENST00000511774 TCEA2Q15560 299 aa19.37■□□□□ 0.69
HMGCS1-206ENST00000511774 ZFAND4Q86XD8 727 aa19.37■□□□□ 0.69
HMGCS1-206ENST00000511774 WDTC1Q8N5D0 677 aa19.37■□□□□ 0.69
HMGCS1-206ENST00000511774 DCAF4L2Q8NA75 395 aa19.37■□□□□ 0.69
HMGCS1-206ENST00000511774 WDR48Q8TAF3 677 aa19.37■□□□□ 0.69
HMGCS1-206ENST00000511774 CCDC74AQ96AQ1 378 aa19.37■□□□□ 0.69
HMGCS1-206ENST00000511774 CCDC114Q96M63 670 aa19.37■□□□□ 0.69
HMGCS1-206ENST00000511774 C2orf49Q9BVC5 232 aaPredicted RBP19.37■□□□□ 0.69
HMGCS1-206ENST00000511774 TMPRSS4Q9NRS4 437 aa19.37■□□□□ 0.69
HMGCS1-206ENST00000511774 FOXJ2Q9P0K8 574 aa19.37■□□□□ 0.69
HMGCS1-206ENST00000511774 PISDQ9UG56 409 aa19.37■□□□□ 0.69
HMGCS1-206ENST00000511774 RIOK3O14730 519 aaKnown RBP19.36■□□□□ 0.69
HMGCS1-206ENST00000511774 PMM2O15305 246 aa19.36■□□□□ 0.69
HMGCS1-206ENST00000511774 ZMPSTE24O75844 475 aa19.36■□□□□ 0.69
HMGCS1-206ENST00000511774 ADCY5O95622 1261 aa19.36■□□□□ 0.69
HMGCS1-206ENST00000511774 ANXA6P08133 673 aa19.36■□□□□ 0.69
HMGCS1-206ENST00000511774 LIPCP11150 499 aa19.36■□□□□ 0.69
HMGCS1-206ENST00000511774 RPIAP49247 311 aa19.36■□□□□ 0.69
HMGCS1-206ENST00000511774 FKBP3Q00688 224 aaKnown RBP19.36■□□□□ 0.69
HMGCS1-206ENST00000511774 NME3Q13232 169 aa19.36■□□□□ 0.69
HMGCS1-206ENST00000511774 PDCLQ13371 301 aa19.36■□□□□ 0.69
HMGCS1-206ENST00000511774 SDR16C5Q8N3Y7 309 aa19.36■□□□□ 0.69
HMGCS1-206ENST00000511774 CENPTQ96BT3 561 aa19.36■□□□□ 0.69
HMGCS1-206ENST00000511774 PPP1R16AQ96I34 528 aa19.36■□□□□ 0.69
HMGCS1-206ENST00000511774 MED15Q96RN5 788 aa19.36■□□□□ 0.69
HMGCS1-206ENST00000511774 CPXM1Q96SM3 734 aa19.36■□□□□ 0.69
HMGCS1-206ENST00000511774 MPP6Q9NZW5 540 aa19.36■□□□□ 0.69
HMGCS1-206ENST00000511774 SIRPGQ9P1W8 387 aa19.36■□□□□ 0.69
HMGCS1-206ENST00000511774 GULP1Q9UBP9 304 aa19.36■□□□□ 0.69
HMGCS1-206ENST00000511774 ICE1Q9Y2F5 2266 aa19.36■□□□□ 0.69
HMGCS1-206ENST00000511774 TEP1Q99973 2627 aaKnown RBP19.35■□□□□ 0.69
HMGCS1-206ENST00000511774 PRAMEF33A0A0G2JMD5 474 aa19.35■□□□□ 0.69
HMGCS1-206ENST00000511774 CLEC18AA5D8T8 446 aa19.35■□□□□ 0.69
HMGCS1-206ENST00000511774 NVLO15381 856 aaKnown RBP19.35■□□□□ 0.69
HMGCS1-206ENST00000511774 PRAMEF10O60809 474 aa19.35■□□□□ 0.69
HMGCS1-206ENST00000511774 LETM1O95202 739 aaPredicted RBP19.35■□□□□ 0.69
HMGCS1-206ENST00000511774 NTRK1P04629 796 aa19.35■□□□□ 0.69
HMGCS1-206ENST00000511774 GP1BBP13224 206 aa19.35■□□□□ 0.69
HMGCS1-206ENST00000511774 CLCN6P51797 869 aa19.35■□□□□ 0.69
HMGCS1-206ENST00000511774 INHBCP55103 352 aa19.35■□□□□ 0.69
HMGCS1-206ENST00000511774 GCNT1Q02742 428 aa19.35■□□□□ 0.69
HMGCS1-206ENST00000511774 PNOCQ13519 176 aa19.35■□□□□ 0.69
HMGCS1-206ENST00000511774 CLEC18BQ6UXF7 455 aa19.35■□□□□ 0.69
HMGCS1-206ENST00000511774 TFAP2DQ7Z6R9 452 aa19.35■□□□□ 0.69
HMGCS1-206ENST00000511774 PTRH1Q86Y79 214 aaKnown RBP19.35■□□□□ 0.69
HMGCS1-206ENST00000511774 CLEC18CQ8NCF0 446 aa19.35■□□□□ 0.69
HMGCS1-206ENST00000511774 BTN2A2Q8WVV5 523 aa19.35■□□□□ 0.69
HMGCS1-206ENST00000511774 ZNF606Q8WXB4 792 aa19.35■□□□□ 0.69
HMGCS1-206ENST00000511774 GLMNQ92990 594 aa19.35■□□□□ 0.69
HMGCS1-206ENST00000511774 GFM1Q96RP9 751 aaKnown RBP19.35■□□□□ 0.69
HMGCS1-206ENST00000511774 MBNL1Q9NR56 388 aaKnown RBP19.35■□□□□ 0.69
HMGCS1-206ENST00000511774 PIGVQ9NUD9 493 aa19.35■□□□□ 0.69
HMGCS1-206ENST00000511774 ZNF212Q9UDV6 495 aa19.35■□□□□ 0.69
HMGCS1-206ENST00000511774 CHD5Q8TDI0 1954 aa19.34■□□□□ 0.69
HMGCS1-206ENST00000511774 CD160O95971 181 aa19.34■□□□□ 0.69
HMGCS1-206ENST00000511774 RPLP0P05388 317 aaKnown RBP19.34■□□□□ 0.69
HMGCS1-206ENST00000511774 CCNHP51946 323 aaPredicted RBP19.34■□□□□ 0.69
HMGCS1-206ENST00000511774 SGCGQ13326 291 aa19.34■□□□□ 0.69
HMGCS1-206ENST00000511774 EIF3IQ13347 325 aaKnown RBP19.34■□□□□ 0.69
HMGCS1-206ENST00000511774 IGFBP7Q16270 282 aa19.34■□□□□ 0.69
HMGCS1-206ENST00000511774 SKIDA1Q1XH10 827 aa19.34■□□□□ 0.69
HMGCS1-206ENST00000511774 TMPRSS9Q7Z410 1059 aa19.34■□□□□ 0.69
HMGCS1-206ENST00000511774 DENND6BQ8NEG7 585 aa19.34■□□□□ 0.69
HMGCS1-206ENST00000511774 OR6K2Q8NGY2 324 aa19.34■□□□□ 0.69
HMGCS1-206ENST00000511774 PCDH19Q8TAB3 1148 aa19.34■□□□□ 0.69
HMGCS1-206ENST00000511774 TBATAQ96M53 351 aa19.34■□□□□ 0.69
HMGCS1-206ENST00000511774 HEPHQ9BQS7 1158 aa19.34■□□□□ 0.69
HMGCS1-206ENST00000511774 CPEB1Q9BZB8 566 aaKnown RBP19.34■□□□□ 0.69
HMGCS1-206ENST00000511774 SLC25A18Q9H1K4 315 aa19.34■□□□□ 0.69
HMGCS1-206ENST00000511774 EPN3Q9H201 632 aa19.34■□□□□ 0.69
HMGCS1-206ENST00000511774 GEMIN8Q9NWZ8 242 aaKnown RBP19.34■□□□□ 0.69
HMGCS1-206ENST00000511774 FCF1Q9Y324 198 aaKnown RBP19.34■□□□□ 0.69
HMGCS1-206ENST00000511774 LOXL2Q9Y4K0 774 aa19.34■□□□□ 0.69
HMGCS1-206ENST00000511774 DRGXA6NNA5 263 aa19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms