RNA–Protein interactions for RNA: ENST00000511739.1

USP38-203, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 2

Gene USP38, Length 6,376 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-203ENST00000511739 UBTFL6P0CB48 400 aaPredicted RBP5.84□□□□□ -1.47
USP38-203ENST00000511739 PRKAR2AP13861 404 aaKnown RBP5.84□□□□□ -1.47
USP38-203ENST00000511739 KCNA5P22460 613 aa5.84□□□□□ -1.47
USP38-203ENST00000511739 ADSLP30566 484 aaPredicted RBP5.84□□□□□ -1.47
USP38-203ENST00000511739 SLC7A2P52569 658 aa5.84□□□□□ -1.47
USP38-203ENST00000511739 DNAJC3Q13217 504 aa5.84□□□□□ -1.47
USP38-203ENST00000511739 UAP1L1Q3KQV9 507 aa5.84□□□□□ -1.47
USP38-203ENST00000511739 MINDY4Q4G0A6 757 aa5.84□□□□□ -1.47
USP38-203ENST00000511739 ULK3Q6PHR2 472 aa5.84□□□□□ -1.47
USP38-203ENST00000511739 USP49Q70CQ1 688 aa5.84□□□□□ -1.47
USP38-203ENST00000511739 SNX20Q7Z614 316 aa5.84□□□□□ -1.47
USP38-203ENST00000511739 ENKURQ8TC29 256 aa5.84□□□□□ -1.47
USP38-203ENST00000511739 HIST1H2AAQ96QV6 131 aa5.84□□□□□ -1.47
USP38-203ENST00000511739 BDH2Q9BUT1 245 aa5.84□□□□□ -1.47
USP38-203ENST00000511739 UGT2B28Q9BY64 529 aa5.84□□□□□ -1.47
USP38-203ENST00000511739 HIPK3Q9H422 1215 aa5.84□□□□□ -1.47
USP38-203ENST00000511739 RIBC2Q9H4K1 309 aa5.84□□□□□ -1.47
USP38-203ENST00000511739 ASB7Q9H672 318 aa5.84□□□□□ -1.47
USP38-203ENST00000511739 MBD2Q9UBB5 411 aa5.84□□□□□ -1.47
USP38-203ENST00000511739 GIT1Q9Y2X7 761 aa5.84□□□□□ -1.47
USP38-203ENST00000511739 KERAO60938 352 aa5.84□□□□□ -1.48
USP38-203ENST00000511739 VAPBO95292 243 aa5.84□□□□□ -1.48
USP38-203ENST00000511739 CYB5AP00167 134 aa5.84□□□□□ -1.48
USP38-203ENST00000511739 CCNYL3P0C7X3 344 aa5.84□□□□□ -1.48
USP38-203ENST00000511739 ITGA3P26006 1051 aa5.84□□□□□ -1.48
USP38-203ENST00000511739 RPL3P39023 403 aaKnown RBP5.84□□□□□ -1.48
USP38-203ENST00000511739 ALDH5A1P51649 535 aaPredicted RBP5.84□□□□□ -1.48
USP38-203ENST00000511739 PPIGQ13427 754 aaKnown RBP eCLIP5.84□□□□□ -1.48
USP38-203ENST00000511739 FAM187BQ17R55 369 aa5.84□□□□□ -1.48
USP38-203ENST00000511739 RAP1GAP2Q684P5 730 aa5.84□□□□□ -1.48
USP38-203ENST00000511739 ZBTB49Q6ZSB9 765 aa5.84□□□□□ -1.48
USP38-203ENST00000511739 P4HA3Q7Z4N8 544 aa5.84□□□□□ -1.48
USP38-203ENST00000511739 ZC3H7AQ8IWR0 971 aaKnown RBP5.84□□□□□ -1.48
USP38-203ENST00000511739 ULK2Q8IYT8 1036 aa5.84□□□□□ -1.48
USP38-203ENST00000511739 CENPSQ8N2Z9 138 aa5.84□□□□□ -1.48
USP38-203ENST00000511739 FAM81AQ8TBF8 368 aa5.84□□□□□ -1.48
USP38-203ENST00000511739 HELQQ8TDG4 1101 aa5.84□□□□□ -1.48
USP38-203ENST00000511739 LRRC46Q96FV0 321 aa5.84□□□□□ -1.48
USP38-203ENST00000511739 CHP1Q99653 195 aa5.84□□□□□ -1.48
USP38-203ENST00000511739 PDCD2LQ9BRP1 358 aa5.84□□□□□ -1.48
USP38-203ENST00000511739 CELF4Q9BZC1 486 aaKnown RBP5.84□□□□□ -1.48
USP38-203ENST00000511739 THAP2Q9H0W7 228 aa5.84□□□□□ -1.48
USP38-203ENST00000511739 POLMQ9NP87 494 aaPredicted RBP5.84□□□□□ -1.48
USP38-203ENST00000511739 TMX2Q9Y320 296 aa5.84□□□□□ -1.48
USP38-203ENST00000511739 NOX1Q9Y5S8 564 aa5.84□□□□□ -1.48
USP38-203ENST00000511739 IDH3BO43837 385 aa5.83□□□□□ -1.48
USP38-203ENST00000511739 FARP2O94887 1054 aaPredicted RBP5.83□□□□□ -1.48
USP38-203ENST00000511739 LDOC1O95751 146 aaPredicted RBP5.83□□□□□ -1.48
USP38-203ENST00000511739 ELFN1P0C7U0 828 aa5.83□□□□□ -1.48
USP38-203ENST00000511739 FASP25445 335 aa5.83□□□□□ -1.48
USP38-203ENST00000511739 GABRR2P28476 465 aa5.83□□□□□ -1.48
USP38-203ENST00000511739 TKTP29401 623 aaKnown RBP5.83□□□□□ -1.48
USP38-203ENST00000511739 GPD2P43304 727 aa5.83□□□□□ -1.48
USP38-203ENST00000511739 CASP4P49662 377 aa5.83□□□□□ -1.48
USP38-203ENST00000511739 PSEN1P49768 467 aa5.83□□□□□ -1.48
USP38-203ENST00000511739 CHN2P52757 468 aa5.83□□□□□ -1.48
USP38-203ENST00000511739 AGBL2Q5U5Z8 902 aa5.83□□□□□ -1.48
USP38-203ENST00000511739 CDKAL1Q5VV42 579 aa5.83□□□□□ -1.48
USP38-203ENST00000511739 DEFB106AQ8N104 65 aa5.83□□□□□ -1.48
USP38-203ENST00000511739 TTC29Q8NA56 475 aaPredicted RBP5.83□□□□□ -1.48
USP38-203ENST00000511739 SETD9Q8NE22 299 aa5.83□□□□□ -1.48
USP38-203ENST00000511739 GMCL1P1Q8NEA9 526 aa5.83□□□□□ -1.48
USP38-203ENST00000511739 DNAJC9Q8WXX5 260 aa5.83□□□□□ -1.48
USP38-203ENST00000511739 PIGKQ92643 395 aa5.83□□□□□ -1.48
USP38-203ENST00000511739 AKT1S1Q96B36 256 aa5.83□□□□□ -1.48
USP38-203ENST00000511739 SLC38A2Q96QD8 506 aa5.83□□□□□ -1.48
USP38-203ENST00000511739 BHLHE41Q9C0J9 482 aaPredicted RBP5.83□□□□□ -1.48
USP38-203ENST00000511739 REEP1Q9H902 201 aa5.83□□□□□ -1.48
USP38-203ENST00000511739 L2HGDHQ9H9P8 463 aa5.83□□□□□ -1.48
USP38-203ENST00000511739 C3orf14Q9HBI5 128 aa5.83□□□□□ -1.48
USP38-203ENST00000511739 AGO4Q9HCK5 861 aaKnown RBP5.83□□□□□ -1.48
USP38-203ENST00000511739 TMEM138Q9NPI0 162 aa5.83□□□□□ -1.48
USP38-203ENST00000511739 AGPAT5Q9NUQ2 364 aa5.83□□□□□ -1.48
USP38-203ENST00000511739 INVSQ9Y283 1065 aa5.83□□□□□ -1.48
USP38-203ENST00000511739 HBS1LQ9Y450 684 aaKnown RBP5.83□□□□□ -1.48
USP38-203ENST00000511739 FAM92AA1XBS5 289 aa5.83□□□□□ -1.48
USP38-203ENST00000511739 LRRC72A6NJI9 287 aa5.83□□□□□ -1.48
USP38-203ENST00000511739 TMEM88BA6NKF7 163 aa5.83□□□□□ -1.48
USP38-203ENST00000511739 FCHO1O14526 889 aa5.83□□□□□ -1.48
USP38-203ENST00000511739 SLC25A14O95258 325 aaPredicted RBP5.83□□□□□ -1.48
USP38-203ENST00000511739 HOXB8P17481 243 aaPredicted RBP5.83□□□□□ -1.48
USP38-203ENST00000511739 HNRNPH1P31943 449 aaKnown RBP5.83□□□□□ -1.48
USP38-203ENST00000511739 NOS2P35228 1153 aa5.83□□□□□ -1.48
USP38-203ENST00000511739 WASP42768 502 aa5.83□□□□□ -1.48
USP38-203ENST00000511739 SP2Q02086 613 aa5.83□□□□□ -1.48
USP38-203ENST00000511739 SMCO1Q147U7 214 aa5.83□□□□□ -1.48
USP38-203ENST00000511739 OTUD3Q5T2D3 398 aaPredicted RBP5.83□□□□□ -1.48
USP38-203ENST00000511739 C11orf63Q6NUN7 778 aa5.83□□□□□ -1.48
USP38-203ENST00000511739 CRTC3Q6UUV7 619 aa5.83□□□□□ -1.48
USP38-203ENST00000511739 EIF3MQ7L2H7 374 aaKnown RBP5.83□□□□□ -1.48
USP38-203ENST00000511739 C4orf19Q8IY42 314 aa5.83□□□□□ -1.48
USP38-203ENST00000511739 ANKRD7Q92527 254 aa5.83□□□□□ -1.48
USP38-203ENST00000511739 RAD51AP1Q96B01 352 aa5.83□□□□□ -1.48
USP38-203ENST00000511739 TINF2Q9BSI4 451 aa5.83□□□□□ -1.48
USP38-203ENST00000511739 HMG20AQ9NP66 347 aa5.83□□□□□ -1.48
USP38-203ENST00000511739 KLC4Q9NSK0 619 aa5.83□□□□□ -1.48
USP38-203ENST00000511739 RABGEF1Q9UJ41 708 aa5.83□□□□□ -1.48
USP38-203ENST00000511739 GMEB2Q9UKD1 530 aa5.83□□□□□ -1.48
USP38-203ENST00000511739 PSMD13Q9UNM6 376 aa5.83□□□□□ -1.48
USP38-203ENST00000511739 EFCAB10A6NFE3 127 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms