RNA–Protein interactions for RNA: ENST00000511667.5

CLDND1-224, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-224ENST00000511667 TRIM7Q9C029 511 aa13.73□□□□□ -0.21
CLDND1-224ENST00000511667 LRRC19Q9H756 370 aa13.73□□□□□ -0.21
CLDND1-224ENST00000511667 ERVMER34-1Q9H9K5 563 aa13.73□□□□□ -0.21
CLDND1-224ENST00000511667 TOR4AQ9NXH8 423 aa13.73□□□□□ -0.21
CLDND1-224ENST00000511667 CAPN11Q9UMQ6 739 aa13.73□□□□□ -0.21
CLDND1-224ENST00000511667 ACTL7AQ9Y615 435 aa13.73□□□□□ -0.21
CLDND1-224ENST00000511667 PIEZO2Q9H5I5 2752 aa13.72□□□□□ -0.21
CLDND1-224ENST00000511667 PTPRQQ9UMZ3 2332 aa13.72□□□□□ -0.21
CLDND1-224ENST00000511667 A0A1B0GTQ1 180 aa13.72□□□□□ -0.21
CLDND1-224ENST00000511667 H0Y8X5 98 aa13.72□□□□□ -0.21
CLDND1-224ENST00000511667 AP1G1O43747 822 aa13.72□□□□□ -0.21
CLDND1-224ENST00000511667 RAMP2O60895 175 aa13.72□□□□□ -0.21
CLDND1-224ENST00000511667 LEFTY1O75610 366 aa13.72□□□□□ -0.21
CLDND1-224ENST00000511667 GSRP00390 522 aa13.72□□□□□ -0.21
CLDND1-224ENST00000511667 SERPINC1P01008 464 aa13.72□□□□□ -0.21
CLDND1-224ENST00000511667 ITGB7P26010 798 aa13.72□□□□□ -0.21
CLDND1-224ENST00000511667 CD38P28907 300 aa13.72□□□□□ -0.21
CLDND1-224ENST00000511667 RXRGP48443 463 aa13.72□□□□□ -0.21
CLDND1-224ENST00000511667 GEMIN4P57678 1058 aaKnown RBP13.72□□□□□ -0.21
CLDND1-224ENST00000511667 NXPH1P58417 271 aa13.72□□□□□ -0.21
CLDND1-224ENST00000511667 KLHL30Q0D2K2 578 aa13.72□□□□□ -0.21
CLDND1-224ENST00000511667 INO80DQ53TQ3 878 aaPredicted RBP13.72□□□□□ -0.21
CLDND1-224ENST00000511667 CARD16Q5EG05 197 aa13.72□□□□□ -0.21
CLDND1-224ENST00000511667 EFHC2Q5JST6 749 aa13.72□□□□□ -0.21
CLDND1-224ENST00000511667 DCUN1D2Q6PH85 259 aa13.72□□□□□ -0.21
CLDND1-224ENST00000511667 ERN2Q76MJ5 926 aaKnown RBP13.72□□□□□ -0.21
CLDND1-224ENST00000511667 KANSL1Q7Z3B3 1105 aa13.72□□□□□ -0.21
CLDND1-224ENST00000511667 DNAAF5Q86Y56 855 aa13.72□□□□□ -0.21
CLDND1-224ENST00000511667 PSTKQ8IV42 348 aaKnown RBP13.72□□□□□ -0.21
CLDND1-224ENST00000511667 MFSD2AQ8NA29 543 aa13.72□□□□□ -0.21
CLDND1-224ENST00000511667 CASKIN2Q8WXE0 1202 aa13.72□□□□□ -0.21
CLDND1-224ENST00000511667 SNX19Q92543 992 aa13.72□□□□□ -0.21
CLDND1-224ENST00000511667 DCBLD2Q96PD2 775 aa13.72□□□□□ -0.21
CLDND1-224ENST00000511667 SPON2Q9BUD6 331 aa13.72□□□□□ -0.21
CLDND1-224ENST00000511667 TNKS2Q9H2K2 1166 aa13.72□□□□□ -0.21
CLDND1-224ENST00000511667 PDFQ9HBH1 243 aa13.72□□□□□ -0.21
CLDND1-224ENST00000511667 GPR27Q9NS67 375 aa13.72□□□□□ -0.21
CLDND1-224ENST00000511667 SEPT11Q9NVA2 429 aaKnown RBP13.72□□□□□ -0.21
CLDND1-224ENST00000511667 IL36AQ9UHA7 158 aa13.72□□□□□ -0.21
CLDND1-224ENST00000511667 DNAI1Q9UI46 699 aa13.72□□□□□ -0.21
CLDND1-224ENST00000511667 MFHAS1Q9Y4C4 1052 aa13.72□□□□□ -0.21
CLDND1-224ENST00000511667 BZW2Q9Y6E2 419 aaKnown RBP13.72□□□□□ -0.21
CLDND1-224ENST00000511667 COL6A6A6NMZ7 2263 aa13.72□□□□□ -0.21
CLDND1-224ENST00000511667 PTPN13Q12923 2485 aa13.72□□□□□ -0.21
CLDND1-224ENST00000511667 TRPM6Q9BX84 2022 aa13.71□□□□□ -0.21
CLDND1-224ENST00000511667 TBC1D3DA0A087WVF3 549 aa13.71□□□□□ -0.21
CLDND1-224ENST00000511667 TBC1D3IA0A087WXS9 549 aa13.71□□□□□ -0.21
CLDND1-224ENST00000511667 TBC1D3EA0A087X179 549 aa13.71□□□□□ -0.21
CLDND1-224ENST00000511667 TBC1D3KA0A087X1G2 549 aa13.71□□□□□ -0.21
CLDND1-224ENST00000511667 ANKRD62A6NC57 917 aa13.71□□□□□ -0.21
CLDND1-224ENST00000511667 TBC1D3FA6NER0 549 aaPredicted RBP13.71□□□□□ -0.21
CLDND1-224ENST00000511667 ZSCAN5CA6NGD5 496 aaPredicted RBP13.71□□□□□ -0.21
CLDND1-224ENST00000511667 FAM47DPA6NHR8 397 aa13.71□□□□□ -0.21
CLDND1-224ENST00000511667 TBC1D3LB9A6J9 549 aa13.71□□□□□ -0.21
CLDND1-224ENST00000511667 FGF10O15520 208 aaPredicted RBP13.71□□□□□ -0.21
CLDND1-224ENST00000511667 FLRT2O43155 660 aa13.71□□□□□ -0.21
CLDND1-224ENST00000511667 SPINT1O43278 529 aa13.71□□□□□ -0.21
CLDND1-224ENST00000511667 ATMINO43313 823 aaPredicted RBP13.71□□□□□ -0.21
CLDND1-224ENST00000511667 RNGTTO60942 597 aaKnown RBP13.71□□□□□ -0.21
CLDND1-224ENST00000511667 GYPCP04921 128 aa13.71□□□□□ -0.21
CLDND1-224ENST00000511667 TBC1D3HP0C7X1 549 aa13.71□□□□□ -0.21
CLDND1-224ENST00000511667 MYBL1P10243 752 aa13.71□□□□□ -0.21
CLDND1-224ENST00000511667 SKILP12757 684 aa13.71□□□□□ -0.21
CLDND1-224ENST00000511667 EPHB2P29323 1055 aa13.71□□□□□ -0.21
CLDND1-224ENST00000511667 HCAR3P49019 387 aa13.71□□□□□ -0.21
CLDND1-224ENST00000511667 CCNHP51946 323 aaPredicted RBP13.71□□□□□ -0.21
CLDND1-224ENST00000511667 UBASH3AP57075 661 aa13.71□□□□□ -0.21
CLDND1-224ENST00000511667 ZBED6P86452 979 aa13.71□□□□□ -0.21
CLDND1-224ENST00000511667 OVGP1Q12889 678 aa13.71□□□□□ -0.21
CLDND1-224ENST00000511667 SERINC3Q13530 473 aa13.71□□□□□ -0.21
CLDND1-224ENST00000511667 POLD3Q15054 466 aaPredicted RBP13.71□□□□□ -0.21
CLDND1-224ENST00000511667 CA9Q16790 459 aa13.71□□□□□ -0.21
CLDND1-224ENST00000511667 ZNF284Q2VY69 593 aa13.71□□□□□ -0.21
CLDND1-224ENST00000511667 PARP15Q460N3 678 aa13.71□□□□□ -0.21
CLDND1-224ENST00000511667 ARSIQ5FYB1 569 aa13.71□□□□□ -0.21
CLDND1-224ENST00000511667 TBC1D3GQ6DHY5 549 aa13.71□□□□□ -0.21
CLDND1-224ENST00000511667 TBC1D3CQ6IPX1 549 aa13.71□□□□□ -0.21
CLDND1-224ENST00000511667 RWDD4Q6NW29 188 aaKnown RBP13.71□□□□□ -0.21
CLDND1-224ENST00000511667 TMPRSS7Q7RTY8 843 aa13.71□□□□□ -0.21
CLDND1-224ENST00000511667 SPATS2Q86XZ4 545 aaKnown RBP13.71□□□□□ -0.21
CLDND1-224ENST00000511667 TBC1D3Q8IZP1 549 aaPredicted RBP13.71□□□□□ -0.21
CLDND1-224ENST00000511667 EPAS1Q99814 870 aa13.71□□□□□ -0.21
CLDND1-224ENST00000511667 HEPHQ9BQS7 1158 aa13.71□□□□□ -0.21
CLDND1-224ENST00000511667 PRORYQ9H606 182 aa13.71□□□□□ -0.21
CLDND1-224ENST00000511667 ZFR2Q9UPR6 939 aaKnown RBP13.71□□□□□ -0.21
CLDND1-224ENST00000511667 FCF1Q9Y324 198 aaKnown RBP13.71□□□□□ -0.21
CLDND1-224ENST00000511667 FARP1Q9Y4F1 1045 aaPredicted RBP13.71□□□□□ -0.21
CLDND1-224ENST00000511667 TRABD2BA6NFA1 517 aa13.7□□□□□ -0.22
CLDND1-224ENST00000511667 TMCO5BA8MYB1 307 aa13.7□□□□□ -0.22
CLDND1-224ENST00000511667 TLR4O00206 839 aa13.7□□□□□ -0.22
CLDND1-224ENST00000511667 LRCH4O75427 683 aa13.7□□□□□ -0.22
CLDND1-224ENST00000511667 PCK1P35558 622 aa13.7□□□□□ -0.22
CLDND1-224ENST00000511667 CCT8P50990 548 aa13.7□□□□□ -0.22
CLDND1-224ENST00000511667 NDST2P52849 883 aa13.7□□□□□ -0.22
CLDND1-224ENST00000511667 CFHR1Q03591 330 aa13.7□□□□□ -0.22
CLDND1-224ENST00000511667 SKOR2Q2VWA4 1001 aaPredicted RBP13.7□□□□□ -0.22
CLDND1-224ENST00000511667 PRPF39Q86UA1 669 aaKnown RBP13.7□□□□□ -0.22
CLDND1-224ENST00000511667 SLCO6A1Q86UG4 719 aa13.7□□□□□ -0.22
CLDND1-224ENST00000511667 HORMAD1Q86X24 394 aa13.7□□□□□ -0.22
CLDND1-224ENST00000511667 NIPA2Q8N8Q9 360 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms